RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	CD5	P06127	495 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	IAPP	P10997	89 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	SLC25A4	P12235	298 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	BTF3	P20290	206 aa	Known RBP	3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	S100G	P29377	79 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	PAX9	P55771	341 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	CMC4	P56277	68 aa	Predicted RBP	3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	PPP1R1A	Q13522	171 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	IL18	Q14116	193 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	SMCO1	Q147U7	214 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368		Q6ZR54	194 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	GPR141	Q7Z602	305 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	CCDC190	Q86UF4	302 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	LRTM2	Q8N967	370 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	DIRAS2	Q96HU8	199 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	PRRT1	Q99946	306 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	C6orf62	Q9GZU0	229 aa	Predicted RBP	3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	MFF	Q9GZY8	342 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	TMEM231	Q9H6L2	316 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	SEPSECS	Q9HD40	501 aa	Known RBP	3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	XCL2	Q9UBD3	114 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	MGAT4C	Q9UBM8	478 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	TBC1D24	Q9ULP9	559 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	C14orf166	Q9Y224	244 aa	Known RBP	3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	MUC4	Q99102	2169 aa		3.89	□□□□□ -1.79
UBE3C-208	ENST00000497368	TRAV30	A0A087WSZ9	112 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	TRAV10	A0A0B4J240	114 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368		A0A0J9YX75	114 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	RPS10-NUDT3	A0A1W2PQS6	291 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368		A0A1W2PS18	150 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368		H3BP45	60 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	GATA2	P23769	480 aa	Predicted RBP	3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	NKX2-1	P43699	371 aa	Predicted RBP	3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	EIF2B2	P49770	351 aa	Known RBP	3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	CCR6	P51684	374 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	SUB1	P53999	127 aa	Known RBP eCLIP	3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	TMBIM6	P55061	237 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	PAFAH1B2	P68402	229 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	OR2F1	Q13607	317 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	OR8G2P	Q6IF36	304 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	LGI3	Q8N145	548 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	RNASE11	Q8TAA1	199 aa	Known RBP	3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	RAB2B	Q8WUD1	216 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	TRGV9	Q99603	122 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	BCL7B	Q9BQE9	202 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	PDCD10	Q9BUL8	212 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	RNF126	Q9BV68	326 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	SRR	Q9GZT4	340 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	ENY2	Q9NPA8	101 aa		3.88	□□□□□ -1.79
UBE3C-208	ENST00000497368	PKHD1L1	Q86WI1	4243 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	DEFB131B	A0A096LNP1	70 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	C11orf94	C9JXX5	98 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368		H3BRN7	92 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	ADAP1	O75689	374 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	ATG12	O94817	140 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	IGKV3-20	P01619	116 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	RD3L	P0DJH9	198 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	AKR1C4	P17516	323 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	GPX4	P36969	197 aa	Predicted RBP	3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	PSMB3	P49720	205 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	TCTA	P57738	103 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	LYZ	P61626	148 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	ARL16	Q0P5N6	197 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	BAK1	Q16611	211 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	TMEM41B	Q5BJD5	291 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	FOXI2	Q6ZQN5	318 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	ACOT7L	Q6ZUV0	252 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	OR4D5	Q8NGN0	318 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368		Q8WTZ3	238 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	C15orf40	Q8WUR7	153 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	PBDC1	Q9BVG4	233 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	MAGT1	Q9H0U3	335 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	C11orf1	Q9H5F2	150 aa		3.87	□□□□□ -1.79
UBE3C-208	ENST00000497368	DUXB	A0A1W2PPF3	345 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	ZNF98	A6NK75	572 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	SFT2D2	O95562	160 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	IFNA10	P01566	189 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	SLC25A6	P12236	298 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	FAM222A	Q5U5X8	452 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	FAM78B	Q5VT40	261 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	GGNBP1	Q5YKI7	109 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	PATE2	Q6UY27	113 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	TMED4	Q7Z7H5	227 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	BAP18	Q8IXM2	172 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	RNF182	Q8N6D2	247 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368		Q8N9P0	234 aa	Predicted RBP	3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	OR11H7	Q8NGC8	314 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	PRSS3P2	Q8NHM4	247 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	MCFD2	Q8NI22	146 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	KRTAP1-5	Q9BYS1	174 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	MCUB	Q9NWR8	336 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	RSL24D1	Q9UHA3	163 aa	Known RBP	3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	FLVCR2	Q9UPI3	526 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	RCL1	Q9Y2P8	373 aa	Known RBP	3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368		U3KQ87	197 aa		3.86	□□□□□ -1.79
UBE3C-208	ENST00000497368	IGLV2-18	A0A075B6J9	118 aa		3.85	□□□□□ -1.79
UBE3C-208	ENST00000497368	FABP12	A6NFH5	140 aa		3.85	□□□□□ -1.79
UBE3C-208	ENST00000497368	ZFP92	A6NM28	416 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms