RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 PIRTP0C851 137 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ATP5G3P48201 142 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ZNF83P51522 516 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 DYNLT3P51808 116 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 NCBP2P52298 156 aaKnown RBP eCLIP2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ZNF136P52737 540 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ATP5J2P56134 94 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 DLX6P56179 175 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TAS2R45P59539 299 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ATP5G2Q06055 141 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 OR1Q1Q15612 314 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TAL2Q16559 108 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 RTL8BQ17RB0 113 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ALKBH6Q3KRA9 238 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 C1orf140Q5VVS0 124 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 ATP5L2Q7Z4Y8 100 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 HSD11B1LQ7Z5J1 315 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TMEM25Q86YD3 366 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 C2orf73Q8N5S3 287 aaPredicted RBP2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TSKUQ8WUA8 353 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 PPDPFLQ8WWR9 84 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 RNF185Q96GF1 192 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 Q96M85 177 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 OR4C12Q96R67 309 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 NMNAT3Q96T66 252 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 MRPL32Q9BYC8 188 aaKnown RBP2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 CHRNA10Q9GZZ6 450 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 SIRPDQ9H106 197 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 CXCL16Q9H2A7 254 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 OSTCQ9NRP0 149 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TAS2R4Q9NYW5 299 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 HIGD1BQ9P298 99 aa2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 NXT1Q9UKK6 140 aaKnown RBP2.34□□□□□ -2.03
RAB3GAP1-206ENST00000497080 TRPM7Q96QT4 1865 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 SHROOM3Q8TF72 1996 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 A0A087WX48 190 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 ZNF816-ZNF321PA0A0X1KG74 233 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 A0A1B0GWB2 263 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 A0A1W2PRD5 423 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 A0A1W2PRE2 83 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 A0A1W2PRF3 423 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 A0A1W2PRM7 423 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 FAM24AA6NFZ4 105 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 TMEM14DPA8MWL7 114 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 SOCS1O15524 211 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 NUPR1O60356 82 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 KLF7O75840 302 aaPredicted RBP2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 LEPROTL1O95214 131 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 OR2H2O95918 312 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 HMGN2P05204 90 aaKnown RBP2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 RHOCP08134 193 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 C8orf88P0DMB2 117 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 HMGA1P17096 107 aaKnown RBP2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 GABRG2P18507 467 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 ORM2P19652 201 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 CBLN1P23435 193 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 BLVRBP30043 206 aaPredicted RBP2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 PEBP1P30086 187 aaKnown RBP2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 SRIP30626 198 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 PTGDSP41222 190 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 SSR2P43308 183 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 CSN1S1P47710 185 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 RHOAP61586 193 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 RPS24P62847 133 aaKnown RBP2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 TBC1D28Q2M2D7 210 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 CEACAM16Q2WEN9 425 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 TIGITQ495A1 244 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 FKBP1CQ5VVH2 108 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 TMEM215Q68D42 235 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 PVRIGQ6DKI7 326 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 RNASEKQ6P5S7 137 aaKnown RBP2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 ASCL4Q6XD76 172 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 Q6ZUT4 128 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 SSX8Q7RTT4 187 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 SPATA12Q7Z6I5 190 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 ANKRD37Q7Z713 158 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 TMEM61Q8N0U2 210 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 LYPD1Q8N2G4 141 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 LRRC25Q8N386 305 aaPredicted RBP2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 OR10AC1Q8NH08 325 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 ZNRF2Q8NHG8 242 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 OTOSQ8NHW6 89 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 APOBEC3DQ96AK3 386 aaPredicted RBP2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 CLDN23Q96B33 292 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 PRSS27Q9BQR3 290 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 TMEM147Q9BVK8 224 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 TMEM222Q9H0R3 208 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 POLDIP2Q9Y2S7 368 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 RFNGQ9Y644 331 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 R4GMQ9 66 aa2.33□□□□□ -2.04
RAB3GAP1-206ENST00000497080 TRBV20-1A0A075B6N2 111 aa2.32□□□□□ -2.04
RAB3GAP1-206ENST00000497080 TRAV27A0A087WT01 109 aa2.32□□□□□ -2.04
RAB3GAP1-206ENST00000497080 A0A0B4J2E0 115 aa2.32□□□□□ -2.04
RAB3GAP1-206ENST00000497080 IGHV1-24A0A0C4DH33 117 aa2.32□□□□□ -2.04
RAB3GAP1-206ENST00000497080 LOC100131303A0A0U1RQF7 123 aa2.32□□□□□ -2.04
RAB3GAP1-206ENST00000497080 C3orf85A0A1B0GTC6 90 aa2.32□□□□□ -2.04
RAB3GAP1-206ENST00000497080 LOC107986453A0A1B0GWG9 222 aa2.32□□□□□ -2.04
RAB3GAP1-206ENST00000497080 A0A1B0GX12 115 aa2.32□□□□□ -2.04
RAB3GAP1-206ENST00000497080 IZUMO1RA6ND01 250 aa2.32□□□□□ -2.04
RAB3GAP1-206ENST00000497080 C17orf51A8MQB3 221 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms