RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 CD28P10747 220 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 OGNP20774 298 aaKnown RBP2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 RPS4Y1P22090 263 aaKnown RBP2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 PPIBP23284 216 aaKnown RBP2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 CD52P31358 61 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 SDC4P31431 198 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 OPRM1P35372 400 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 OPRK1P41145 380 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 TAF6P49848 677 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 FGF12P61328 243 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 RPS28P62857 69 aaKnown RBP2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 SYCNQ0VAF6 134 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 DHRS2Q13268 280 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 Q6Q795 121 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 AGTRAPQ6RW13 159 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 HRCT1Q6UXD1 115 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 TIFABQ6ZNK6 161 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 WDR86Q86TI4 376 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 PCP2Q8IVA1 136 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 DNAJC9Q8WXX5 260 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 EXOSC8Q96B26 276 aaKnown RBP2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 MALSU1Q96EH3 234 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 PEBP4Q96S96 227 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 SHANK2-AS3Q9BTD1 123 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 TMEM70Q9BUB7 260 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 C20orf27Q9GZN8 174 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 COMMD5Q9GZQ3 224 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 COPZ2Q9P299 210 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 TP73-AS1Q9UF72 201 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 HSPB8Q9UJY1 196 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 MYCBP2O75592 4640 aa2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 DYNC1H1Q14204 4646 aaKnown RBP2.44□□□□□ -2.02
EXOSC3-208ENST00000496910 HRNRQ86YZ3 2850 aaPredicted RBP2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 IGSF9BQ9UPX0 1349 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 TRBV20OR9-2A0A075B6H5 130 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 IGHV3-43A0A0B4J1X8 118 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 A0A1B0GX51 115 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 FAM168BA1KXE4 195 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 TMEM189A5PLL7 270 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 LINC00862A6NCI5 91 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 IZUMO1RA6ND01 250 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 CCDC160A6NGH7 325 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 OR5H14A6NHG9 310 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 RIIAD1A6NNX1 92 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 A8MWL6 223 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 C5orf58C9J3I9 102 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 C11orf94C9JXX5 98 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 ATP6V1G2-DDX39BF2Z307 99 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 CCL16O15467 120 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 PLA2G10O15496 165 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 CYB5BO43169 146 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 SULT1C4O75897 302 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 SRIP30626 198 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 CA5AP35218 305 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 GABRA2P47869 451 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 EVX1P49640 407 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 ADM2Q7Z4H4 148 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 ZNF433Q8N7K0 673 aaPredicted RBP2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 MRPL30Q8TCC3 161 aaKnown RBP2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 ADAT3Q96EY9 351 aaPredicted RBP2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 TM2D3Q9BRN9 247 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 CHCHD7Q9BUK0 85 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 TMEM126AQ9H061 195 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 HMG20AQ9NP66 347 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 AK3Q9UIJ7 227 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 CELA1Q9UNI1 258 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 STARD9Q9P2P6 4700 aa2.43□□□□□ -2.02
EXOSC3-208ENST00000496910 CCDC171Q6TFL3 1326 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 IGHV3OR15-7A0A075B7D8 119 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 TRAV41A0A0B4J266 112 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 A6NDX4 124 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 DPRXA6NFQ7 191 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 TRAPPC2LH3BP13 241 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 H7BYZ3 331 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 BET1O15155 118 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 SMIM24O75264 130 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 IFNA7P01567 189 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 HLA-DQB1P01920 261 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 ADRA2AP08913 450 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 UBBP0CG47 229 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 MPC1LP0DKB6 136 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 ZNF32P17041 273 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 PIGPP57054 158 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 RPS11P62280 158 aaKnown RBP eCLIP2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 GNB2P62879 340 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 HBA1P69905 142 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 HOXC5Q00444 222 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 GLT8D1Q68CQ7 371 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 LRRC28Q86X40 367 aaPredicted RBP2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 CD177Q8N6Q3 437 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 Q8N9W7 124 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 NUP35Q8NFH5 326 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 OR8A1Q8NGG7 326 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 OR10D4PQ8NGN7 298 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 OR5W2Q8NH69 310 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 CMBLQ96DG6 245 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 NRTNQ99748 197 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 POPDC3Q9HBV1 291 aa2.42□□□□□ -2.02
EXOSC3-208ENST00000496910 FAM60AQ9NP50 221 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms