RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 K7EIM0 57 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 KLRD1Q13241 179 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 SAPCD1Q5SSQ6 148 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 TCF24Q7RTU0 167 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 ATP5L2Q7Z4Y8 100 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 DTX2Q86UW9 622 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 NIT1Q86X76 327 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 OR11H6Q8NGC7 330 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 CFHR4Q92496 578 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 VAMP8Q9BV40 100 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 ZFP30Q9Y2G7 519 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 PAM16Q9Y3D7 125 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 HILPDAQ9Y5L2 63 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 DIRC3C9JPN6 131 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 NDUFS7O75251 213 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 OR2J3O76001 311 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 CAMPP49913 170 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 FAM19A2Q8N3H0 131 aa11.81□□□□□ -0.52
UBXN11-216ENST00000496466 SSBP4Q9BWG4 385 aaPredicted RBP11.81□□□□□ -0.52
UBXN11-216ENST00000496466 LOC105371242A0A075B767 164 aa11.8□□□□□ -0.52
UBXN11-216ENST00000496466 NBR2O15453 112 aa11.8□□□□□ -0.52
UBXN11-216ENST00000496466 GPR6P46095 362 aaPredicted RBP11.8□□□□□ -0.52
UBXN11-216ENST00000496466 KLF5Q13887 457 aaPredicted RBP11.8□□□□□ -0.52
UBXN11-216ENST00000496466 ABCA1O95477 2261 aa11.8□□□□□ -0.52
UBXN11-216ENST00000496466 A0A1W2PRD5 423 aa11.8□□□□□ -0.52
UBXN11-216ENST00000496466 A0A1W2PRF3 423 aa11.8□□□□□ -0.52
UBXN11-216ENST00000496466 A0A1W2PRM7 423 aa11.8□□□□□ -0.52
UBXN11-216ENST00000496466 P01737 135 aa11.8□□□□□ -0.52
UBXN11-216ENST00000496466 CT83Q5H943 113 aa11.8□□□□□ -0.52
UBXN11-216ENST00000496466 EXOC3-AS1Q8N2X6 119 aa11.8□□□□□ -0.52
UBXN11-216ENST00000496466 ALKBH7Q9BT30 221 aaPredicted RBP11.8□□□□□ -0.52
UBXN11-216ENST00000496466 A8MWL6 223 aa11.79□□□□□ -0.52
UBXN11-216ENST00000496466 GNLYP22749 145 aa11.79□□□□□ -0.52
UBXN11-216ENST00000496466 CD24P25063 80 aa11.79□□□□□ -0.52
UBXN11-216ENST00000496466 COL5A1-AS1Q5SY13 56 aa11.79□□□□□ -0.52
UBXN11-216ENST00000496466 Q86TA4 180 aa11.79□□□□□ -0.52
UBXN11-216ENST00000496466 NPBQ8NG41 125 aa11.79□□□□□ -0.52
UBXN11-216ENST00000496466 GTSF1Q8WW33 167 aa11.79□□□□□ -0.52
UBXN11-216ENST00000496466 TRAV8-1A0A0A6YYK1 113 aa11.78□□□□□ -0.52
UBXN11-216ENST00000496466 NDUFA3O95167 84 aa11.78□□□□□ -0.52
UBXN11-216ENST00000496466 ITLN2Q8WWU7 325 aaPredicted RBP11.78□□□□□ -0.52
UBXN11-216ENST00000496466 SHANK2-AS3Q9BTD1 123 aa11.78□□□□□ -0.52
UBXN11-216ENST00000496466 UBTD1Q9HAC8 227 aa11.78□□□□□ -0.52
UBXN11-216ENST00000496466 ODF3BA8MYP8 253 aa11.78□□□□□ -0.52
UBXN11-216ENST00000496466 M0R1W7 72 aa11.78□□□□□ -0.52
UBXN11-216ENST00000496466 IGLV2-11P01706 119 aa11.78□□□□□ -0.52
UBXN11-216ENST00000496466 C3orf79P0CE67 100 aa11.78□□□□□ -0.52
UBXN11-216ENST00000496466 NTF3P20783 257 aa11.78□□□□□ -0.52
UBXN11-216ENST00000496466 FBLN7Q53RD9 439 aa11.78□□□□□ -0.52
UBXN11-216ENST00000496466 DAZAP1Q96EP5 407 aaKnown RBP11.78□□□□□ -0.52
UBXN11-216ENST00000496466 H3BRN7 92 aa11.77□□□□□ -0.52
UBXN11-216ENST00000496466 C19orf84I3L1E1 186 aa11.77□□□□□ -0.52
UBXN11-216ENST00000496466 HOXB4P17483 251 aaPredicted RBP11.77□□□□□ -0.52
UBXN11-216ENST00000496466 CEACAM3P40198 252 aa11.77□□□□□ -0.52
UBXN11-216ENST00000496466 HBBP68871 147 aa11.77□□□□□ -0.52
UBXN11-216ENST00000496466 GOLT1AQ6ZVE7 132 aa11.77□□□□□ -0.52
UBXN11-216ENST00000496466 CIARTQ8N365 385 aaPredicted RBP11.77□□□□□ -0.52
UBXN11-216ENST00000496466 PGLYRP4Q96LB8 373 aa11.77□□□□□ -0.52
UBXN11-216ENST00000496466 TOX4O94842 621 aa11.77□□□□□ -0.53
UBXN11-216ENST00000496466 PRTN3P24158 256 aa11.77□□□□□ -0.53
UBXN11-216ENST00000496466 RBX1P62877 108 aa11.77□□□□□ -0.53
UBXN11-216ENST00000496466 KLF17Q5JT82 389 aaPredicted RBP11.77□□□□□ -0.53
UBXN11-216ENST00000496466 PRR31Q5SQ13 230 aa11.77□□□□□ -0.53
UBXN11-216ENST00000496466 PRNTQ86SH4 94 aa11.77□□□□□ -0.53
UBXN11-216ENST00000496466 ZNF491Q8N8L2 437 aa11.77□□□□□ -0.53
UBXN11-216ENST00000496466 OR4B1Q8NGF8 309 aa11.77□□□□□ -0.53
UBXN11-216ENST00000496466 OR2D3Q8NGH3 330 aa11.77□□□□□ -0.53
UBXN11-216ENST00000496466 C17orf77Q96MU5 243 aa11.77□□□□□ -0.53
UBXN11-216ENST00000496466 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
UBXN11-216ENST00000496466 NPIPB6E9PJ23 425 aa11.76□□□□□ -0.53
UBXN11-216ENST00000496466 TCF21O43680 179 aa11.76□□□□□ -0.53
UBXN11-216ENST00000496466 ZFP36P26651 326 aaKnown RBP11.76□□□□□ -0.53
UBXN11-216ENST00000496466 Q71RC1 249 aaPredicted RBP11.76□□□□□ -0.53
UBXN11-216ENST00000496466 BORCS7Q96B45 105 aa11.76□□□□□ -0.53
UBXN11-216ENST00000496466 GFRA4Q9GZZ7 299 aa11.76□□□□□ -0.53
UBXN11-216ENST00000496466 SOX21Q9Y651 276 aaPredicted RBP11.76□□□□□ -0.53
UBXN11-216ENST00000496466 TRBV6-1A0A0K0K1D8 114 aa11.76□□□□□ -0.53
UBXN11-216ENST00000496466 HES1Q14469 280 aa11.76□□□□□ -0.53
UBXN11-216ENST00000496466 C5orf64Q2M2E5 130 aa11.76□□□□□ -0.53
UBXN11-216ENST00000496466 BPIFA4PQ86YQ2 179 aa11.76□□□□□ -0.53
UBXN11-216ENST00000496466 HSBP1O75506 76 aa11.75□□□□□ -0.53
UBXN11-216ENST00000496466 IGLC2P0DOY2 106 aa11.75□□□□□ -0.53
UBXN11-216ENST00000496466 CTRLP40313 264 aa11.75□□□□□ -0.53
UBXN11-216ENST00000496466 RBPMS2Q6ZRY4 209 aaKnown RBP11.75□□□□□ -0.53
UBXN11-216ENST00000496466 OR4F17Q8NGA8 305 aa11.75□□□□□ -0.53
UBXN11-216ENST00000496466 RNF125Q96EQ8 232 aa11.75□□□□□ -0.53
UBXN11-216ENST00000496466 S4R3C0 116 aa11.75□□□□□ -0.53
UBXN11-216ENST00000496466 WI2-2373I1.2A0A1W2PRP0 233 aa11.75□□□□□ -0.53
UBXN11-216ENST00000496466 IL4P05112 153 aa11.75□□□□□ -0.53
UBXN11-216ENST00000496466 RNF24Q9Y225 148 aa11.75□□□□□ -0.53
UBXN11-216ENST00000496466 FAM231BA6NCW3 169 aa11.74□□□□□ -0.53
UBXN11-216ENST00000496466 ZNF785A8K8V0 405 aa11.74□□□□□ -0.53
UBXN11-216ENST00000496466 MRPS12O15235 138 aaKnown RBP11.74□□□□□ -0.53
UBXN11-216ENST00000496466 HLA-DRB1P01911 266 aa11.74□□□□□ -0.53
UBXN11-216ENST00000496466 COL8A1P27658 744 aa11.74□□□□□ -0.53
UBXN11-216ENST00000496466 SPATA45Q537H7 98 aa11.74□□□□□ -0.53
UBXN11-216ENST00000496466 RNASEKQ6P5S7 137 aaKnown RBP11.74□□□□□ -0.53
UBXN11-216ENST00000496466 C16orf54Q6UWD8 224 aa11.74□□□□□ -0.53
UBXN11-216ENST00000496466 SIGLEC15Q6ZMC9 328 aa11.74□□□□□ -0.53
UBXN11-216ENST00000496466 VMO1Q7Z5L0 202 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms