RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 C17orf77Q96MU5 243 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 RNF126Q9BV68 326 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 SLC25A39Q9BZJ4 359 aaPredicted RBP9.16□□□□□ -0.94
PTPRF-214ENST00000496043 SLC35B3Q9H1N7 401 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 DOK5Q9P104 306 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 CELA1Q9UNI1 258 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 HIGD1AQ9Y241 93 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 GOLT1BQ9Y3E0 138 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 RFNGQ9Y644 331 aa9.16□□□□□ -0.94
PTPRF-214ENST00000496043 IGHV4-4A0A075B6R2 117 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 FNDC10F2Z333 226 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 H3BRN7 92 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 PLA2G10O15496 165 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 TSC22D2O75157 780 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 DUSP14O95147 198 aaKnown RBP9.15□□□□□ -0.94
PTPRF-214ENST00000496043 OR5G3P0C626 314 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 RPL7P18124 248 aaKnown RBP9.15□□□□□ -0.94
PTPRF-214ENST00000496043 EMP1P54849 157 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 PLP1P60201 277 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 FGL1Q08830 312 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 ZNF767PQ75MW2 155 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 ZNF709Q8N972 641 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 SHANK2-AS3Q9BTD1 123 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 BATF3Q9NR55 127 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 MGAT4CQ9UBM8 478 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 RNF24Q9Y225 148 aa9.15□□□□□ -0.94
PTPRF-214ENST00000496043 LYRM1O43325 122 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 CCNKO75909 580 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 HBE1P02100 147 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 TCRBP04435 133 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 LINC00869P0C866 280 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 PRR20EP86478 221 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 PRR20CP86479 221 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 PRR20DP86480 221 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 PRR20BP86481 221 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 PRR20AP86496 221 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 ZNF846Q147U1 533 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 TEPPQ6URK8 271 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 GGACTQ9BVM4 153 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 SCRT1Q9BWW7 348 aa9.14□□□□□ -0.95
PTPRF-214ENST00000496043 TEX48A0A1B0GUV7 120 aa9.13□□□□□ -0.95
PTPRF-214ENST00000496043 A8MTW9 85 aa9.13□□□□□ -0.95
PTPRF-214ENST00000496043 L7N2F9 121 aa9.13□□□□□ -0.95
PTPRF-214ENST00000496043 GOSR2O14653 212 aa9.13□□□□□ -0.95
PTPRF-214ENST00000496043 MBPP02686 304 aaPredicted RBP9.13□□□□□ -0.95
PTPRF-214ENST00000496043 AMBPP02760 352 aa9.13□□□□□ -0.95
PTPRF-214ENST00000496043 VAMP2P63027 116 aa9.13□□□□□ -0.95
PTPRF-214ENST00000496043 PXDC1Q5TGL8 231 aa9.13□□□□□ -0.95
PTPRF-214ENST00000496043 IGFL4Q6B9Z1 124 aa9.13□□□□□ -0.95
PTPRF-214ENST00000496043 C1orf158Q8N1D5 194 aa9.13□□□□□ -0.95
PTPRF-214ENST00000496043 LRRC20Q8TCA0 184 aa9.13□□□□□ -0.95
PTPRF-214ENST00000496043 ARL6Q9H0F7 186 aa9.13□□□□□ -0.95
PTPRF-214ENST00000496043 C20orf85Q9H1P6 137 aa9.13□□□□□ -0.95
PTPRF-214ENST00000496043 TRAV8-2A0A0B4J237 113 aa9.12□□□□□ -0.95
PTPRF-214ENST00000496043 C7orf66A4D0T2 115 aa9.12□□□□□ -0.95
PTPRF-214ENST00000496043 FAM25EA8MYX2 175 aa9.12□□□□□ -0.95
PTPRF-214ENST00000496043 K7EPK0 472 aa9.12□□□□□ -0.95
PTPRF-214ENST00000496043 RRN3P1Q2M238 152 aa9.12□□□□□ -0.95
PTPRF-214ENST00000496043 PATE2Q6UY27 113 aa9.12□□□□□ -0.95
PTPRF-214ENST00000496043 IGF2BP2-AS1Q96M15 143 aa9.12□□□□□ -0.95
PTPRF-214ENST00000496043 TMEM208Q9BTX3 173 aa9.12□□□□□ -0.95
PTPRF-214ENST00000496043 NDUFAF3Q9BU61 184 aa9.12□□□□□ -0.95
PTPRF-214ENST00000496043 DKK2Q9UBU2 259 aa9.12□□□□□ -0.95
PTPRF-214ENST00000496043 RCL1Q9Y2P8 373 aaKnown RBP9.12□□□□□ -0.95
PTPRF-214ENST00000496043 TRAV6A0A075B6T7 132 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 LOC102723971A0A1B0GUV8 181 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 C5orf51A6NDU8 294 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 BCAP31P51572 246 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 CNN1P51911 297 aaKnown RBP9.11□□□□□ -0.95
PTPRF-214ENST00000496043 ARL16Q0P5N6 197 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 FAM222AQ5U5X8 452 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 AMTNQ6UX39 209 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 C12orf45Q8N5I9 185 aaPredicted RBP9.11□□□□□ -0.95
PTPRF-214ENST00000496043 RNF182Q8N6D2 247 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 ZNF738Q8NE65 137 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 ZNF431Q8TF32 576 aaPredicted RBP9.11□□□□□ -0.95
PTPRF-214ENST00000496043 UHRF2Q96PU4 802 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 NIPSNAP3BQ9BS92 247 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 ARV1Q9H2C2 271 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 KMT2AQ03164 3969 aa9.11□□□□□ -0.95
PTPRF-214ENST00000496043 A0A087X0K7 114 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 CCSO14618 274 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 AGPAT2O15120 278 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 H2AFB2P0C5Z0 115 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 P0DMU3 169 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 FAM231AP0DMU4 169 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 FAM231CP0DMU5 169 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 B2MP61769 119 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 SLC38A11Q08AI6 406 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 RAB31Q13636 194 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 OXA1LQ15070 435 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 PSG3Q16557 428 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 ZNF546Q86UE3 836 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 OR11H7Q8NGC8 314 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 FAM210BQ96KR6 192 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 C2orf50Q96LR7 162 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 SEC22CQ9BRL7 303 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 CCDC32Q9BV29 185 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 PPP1R14DQ9NXH3 145 aa9.1□□□□□ -0.95
PTPRF-214ENST00000496043 PLA2G2EQ9NZK7 142 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms