RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 NOP10Q9NPE3 64 aaKnown RBP9.22□□□□□ -0.93
COL1A1-209ENST00000495677 HSPB7Q9UBY9 170 aa9.22□□□□□ -0.93
COL1A1-209ENST00000495677 TMEM56-RWDD3S4R434 201 aa9.22□□□□□ -0.93
COL1A1-209ENST00000495677 TRAV12-2A0A075B6T6 113 aa9.21□□□□□ -0.94
COL1A1-209ENST00000495677 TRAV8-2A0A0B4J237 113 aa9.21□□□□□ -0.94
COL1A1-209ENST00000495677 J3QL48 77 aa9.21□□□□□ -0.94
COL1A1-209ENST00000495677 SULT1A3P0DMM9 295 aa9.21□□□□□ -0.94
COL1A1-209ENST00000495677 SULT1A4P0DMN0 295 aa9.21□□□□□ -0.94
COL1A1-209ENST00000495677 ZNF182P17025 639 aaPredicted RBP9.21□□□□□ -0.94
COL1A1-209ENST00000495677 NCS1P62166 190 aa9.21□□□□□ -0.94
COL1A1-209ENST00000495677 GGNBP1Q5YKI7 109 aa9.21□□□□□ -0.94
COL1A1-209ENST00000495677 SLC35E1Q96K37 410 aa9.21□□□□□ -0.94
COL1A1-209ENST00000495677 C20orf144Q9BQM9 153 aa9.21□□□□□ -0.94
COL1A1-209ENST00000495677 MDFICQ9P1T7 246 aa9.21□□□□□ -0.94
COL1A1-209ENST00000495677 MTFP1Q9UDX5 166 aa9.21□□□□□ -0.94
COL1A1-209ENST00000495677 IGKV1OR2-108A0A075B7D4 117 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 SMR3BP02814 79 aaPredicted RBP9.2□□□□□ -0.94
COL1A1-209ENST00000495677 HOXA5P20719 270 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 S100A7P31151 101 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 VBP1P61758 197 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 MEF2DQ14814 521 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 GPR107Q5VW38 600 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 TMEM268Q5VZI3 342 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 THAP8Q8NA92 274 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 MARCH1Q8TCQ1 289 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 DTD1Q8TEA8 209 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 IL22RA2Q969J5 263 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 SLC25A39Q9BZJ4 359 aaPredicted RBP9.2□□□□□ -0.94
COL1A1-209ENST00000495677 NAA50Q9GZZ1 169 aaKnown RBP9.2□□□□□ -0.94
COL1A1-209ENST00000495677 NAA60Q9H7X0 242 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 COMMD3Q9UBI1 195 aa9.2□□□□□ -0.94
COL1A1-209ENST00000495677 A0A096LPF7 62 aa9.19□□□□□ -0.94
COL1A1-209ENST00000495677 A0A0J9YY99 117 aa9.19□□□□□ -0.94
COL1A1-209ENST00000495677 H7BYZ3 331 aa9.19□□□□□ -0.94
COL1A1-209ENST00000495677 SIVA1O15304 175 aa9.19□□□□□ -0.94
COL1A1-209ENST00000495677 FUSP35637 526 aaKnown RBP eCLIP9.19□□□□□ -0.94
COL1A1-209ENST00000495677 CDKN1BP46527 198 aa9.19□□□□□ -0.94
COL1A1-209ENST00000495677 OR2F1Q13607 317 aa9.19□□□□□ -0.94
COL1A1-209ENST00000495677 SURF2Q15527 256 aaPredicted RBP9.19□□□□□ -0.94
COL1A1-209ENST00000495677 Q6ZSN1 163 aa9.19□□□□□ -0.94
COL1A1-209ENST00000495677 NFE4Q86UQ8 179 aa9.19□□□□□ -0.94
COL1A1-209ENST00000495677 TMEM229BQ8NBD8 167 aa9.19□□□□□ -0.94
COL1A1-209ENST00000495677 SLC25A22Q9H936 323 aa9.19□□□□□ -0.94
COL1A1-209ENST00000495677 A0A087WTM6 91 aa9.18□□□□□ -0.94
COL1A1-209ENST00000495677 CRYM-AS1A6NIL9 109 aa9.18□□□□□ -0.94
COL1A1-209ENST00000495677 KRTAP29-1A8MX34 341 aaPredicted RBP9.18□□□□□ -0.94
COL1A1-209ENST00000495677 HTN1P15515 57 aa9.18□□□□□ -0.94
COL1A1-209ENST00000495677 CCR6P51684 374 aa9.18□□□□□ -0.94
COL1A1-209ENST00000495677 SCGB2B2Q4G0G5 96 aa9.18□□□□□ -0.94
COL1A1-209ENST00000495677 OR8A1Q8NGG7 326 aa9.18□□□□□ -0.94
COL1A1-209ENST00000495677 OR4D10Q8NGI6 311 aa9.18□□□□□ -0.94
COL1A1-209ENST00000495677 OR52I2Q8NH67 350 aa9.18□□□□□ -0.94
COL1A1-209ENST00000495677 RBKSQ9H477 322 aa9.18□□□□□ -0.94
COL1A1-209ENST00000495677 GPR132Q9UNW8 380 aa9.18□□□□□ -0.94
COL1A1-209ENST00000495677 C14orf166Q9Y224 244 aaKnown RBP9.18□□□□□ -0.94
COL1A1-209ENST00000495677 RAB3DO95716 219 aa9.17□□□□□ -0.94
COL1A1-209ENST00000495677 GCSHP23434 173 aa9.17□□□□□ -0.94
COL1A1-209ENST00000495677 TAS2R19P59542 299 aa9.17□□□□□ -0.94
COL1A1-209ENST00000495677 RHOBP62745 196 aa9.17□□□□□ -0.94
COL1A1-209ENST00000495677 SERTAD4-AS1Q5TG53 156 aa9.17□□□□□ -0.94
COL1A1-209ENST00000495677 IGFL4Q6B9Z1 124 aa9.17□□□□□ -0.94
COL1A1-209ENST00000495677 CLVS1Q8IUQ0 354 aaPredicted RBP9.17□□□□□ -0.94
COL1A1-209ENST00000495677 RNF182Q8N6D2 247 aa9.17□□□□□ -0.94
COL1A1-209ENST00000495677 VSIG2Q96IQ7 327 aa9.17□□□□□ -0.94
COL1A1-209ENST00000495677 HPGDSO60760 199 aa9.16□□□□□ -0.94
COL1A1-209ENST00000495677 NOL3O60936 208 aaKnown RBP9.16□□□□□ -0.94
COL1A1-209ENST00000495677 RLN2P04090 185 aa9.16□□□□□ -0.94
COL1A1-209ENST00000495677 CXCL3P19876 107 aa9.16□□□□□ -0.94
COL1A1-209ENST00000495677 RAB11AP62491 216 aa9.16□□□□□ -0.94
COL1A1-209ENST00000495677 SMCO1Q147U7 214 aa9.16□□□□□ -0.94
COL1A1-209ENST00000495677 STEAP1BQ6NZ63 245 aa9.16□□□□□ -0.94
COL1A1-209ENST00000495677 CCDC28AQ8IWP9 274 aa9.16□□□□□ -0.94
COL1A1-209ENST00000495677 ZNF738Q8NE65 137 aa9.16□□□□□ -0.94
COL1A1-209ENST00000495677 C15orf40Q8WUR7 153 aa9.16□□□□□ -0.94
COL1A1-209ENST00000495677 TMEM70Q9BUB7 260 aa9.16□□□□□ -0.94
COL1A1-209ENST00000495677 PPP1R14DQ9NXH3 145 aa9.16□□□□□ -0.94
COL1A1-209ENST00000495677 KCNIP3Q9Y2W7 256 aa9.16□□□□□ -0.94
COL1A1-209ENST00000495677 A0A0B4J2A0 478 aa9.15□□□□□ -0.94
COL1A1-209ENST00000495677 GAGE12BA1L429 117 aa9.15□□□□□ -0.94
COL1A1-209ENST00000495677 K7EP13 123 aa9.15□□□□□ -0.94
COL1A1-209ENST00000495677 GAGE7O76087 117 aa9.15□□□□□ -0.94
COL1A1-209ENST00000495677 GAGE12FP0CL80 117 aa9.15□□□□□ -0.94
COL1A1-209ENST00000495677 GAGE12GP0CL81 117 aa9.15□□□□□ -0.94
COL1A1-209ENST00000495677 GAGE12IP0CL82 117 aa9.15□□□□□ -0.94
COL1A1-209ENST00000495677 HIST1H1AQ02539 215 aaPredicted RBP9.15□□□□□ -0.94
COL1A1-209ENST00000495677 SSBP1Q04837 148 aaKnown RBP9.15□□□□□ -0.94
COL1A1-209ENST00000495677 DAZ2Q13117 558 aaKnown RBP9.15□□□□□ -0.94
COL1A1-209ENST00000495677 PSG3Q16557 428 aa9.15□□□□□ -0.94
COL1A1-209ENST00000495677 BPIFCQ8NFQ6 507 aa9.15□□□□□ -0.94
COL1A1-209ENST00000495677 SHPKQ9UHJ6 478 aa9.15□□□□□ -0.94
COL1A1-209ENST00000495677 TNFRSF18Q9Y5U5 241 aa9.15□□□□□ -0.94
COL1A1-209ENST00000495677 A0A087X0K7 114 aa9.14□□□□□ -0.95
COL1A1-209ENST00000495677 CCDC160A6NGH7 325 aa9.14□□□□□ -0.95
COL1A1-209ENST00000495677 RPL7P18124 248 aaKnown RBP9.14□□□□□ -0.95
COL1A1-209ENST00000495677 ORM2P19652 201 aa9.14□□□□□ -0.95
COL1A1-209ENST00000495677 OR1S1Q8NH92 325 aa9.14□□□□□ -0.95
COL1A1-209ENST00000495677 TMEM147Q9BVK8 224 aa9.14□□□□□ -0.95
COL1A1-209ENST00000495677 SNURFLB1AK76 121 aa9.13□□□□□ -0.95
COL1A1-209ENST00000495677 PRSS46E5RG02 174 aa9.13□□□□□ -0.95
COL1A1-209ENST00000495677 H3BRN7 92 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms