RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 SMIM4Q8WVI0 70 aa12.23□□□□□ -0.45
TMEM53-209ENST00000495630 LINC01587Q99440 93 aa12.23□□□□□ -0.45
TMEM53-209ENST00000495630 TRAV8-2A0A0B4J237 113 aa12.22□□□□□ -0.45
TMEM53-209ENST00000495630 PIGBOS1A0A0B4J2F0 54 aa12.22□□□□□ -0.45
TMEM53-209ENST00000495630 BTF3P20290 206 aaKnown RBP12.22□□□□□ -0.45
TMEM53-209ENST00000495630 TAS2R60P59551 318 aa12.22□□□□□ -0.45
TMEM53-209ENST00000495630 SRPXP78539 464 aa12.22□□□□□ -0.45
TMEM53-209ENST00000495630 CTF1Q16619 201 aa12.22□□□□□ -0.45
TMEM53-209ENST00000495630 CLVS1Q8IUQ0 354 aaPredicted RBP12.22□□□□□ -0.45
TMEM53-209ENST00000495630 BAP18Q8IXM2 172 aa12.22□□□□□ -0.45
TMEM53-209ENST00000495630 MIXL1Q9H2W2 232 aa12.22□□□□□ -0.45
TMEM53-209ENST00000495630 TIMM8BQ9Y5J9 83 aaPredicted RBP12.22□□□□□ -0.45
TMEM53-209ENST00000495630 PITX3O75364 302 aa12.21□□□□□ -0.45
TMEM53-209ENST00000495630 ANXA3P12429 323 aa12.21□□□□□ -0.45
TMEM53-209ENST00000495630 ORM2P19652 201 aa12.21□□□□□ -0.45
TMEM53-209ENST00000495630 IGFL4Q6B9Z1 124 aa12.21□□□□□ -0.45
TMEM53-209ENST00000495630 BPIFCQ8NFQ6 507 aa12.21□□□□□ -0.45
TMEM53-209ENST00000495630 ZNF503Q96F45 646 aa12.21□□□□□ -0.45
TMEM53-209ENST00000495630 C16orf74Q96GX8 76 aa12.21□□□□□ -0.45
TMEM53-209ENST00000495630 TMEM147Q9BVK8 224 aa12.21□□□□□ -0.45
TMEM53-209ENST00000495630 SCP2D1Q9UJQ7 156 aa12.21□□□□□ -0.45
TMEM53-209ENST00000495630 TRAV12-2A0A075B6T6 113 aa12.2□□□□□ -0.46
TMEM53-209ENST00000495630 BOLA2-SMG1P6H3BVE0 249 aa12.2□□□□□ -0.46
TMEM53-209ENST00000495630 CTDSPLO15194 276 aa12.2□□□□□ -0.46
TMEM53-209ENST00000495630 RPP30P78346 268 aaKnown RBP12.2□□□□□ -0.46
TMEM53-209ENST00000495630 ZNF493Q6ZR52 646 aa12.2□□□□□ -0.46
TMEM53-209ENST00000495630 TMEM144Q7Z5S9 345 aa12.2□□□□□ -0.46
TMEM53-209ENST00000495630 RNF182Q8N6D2 247 aa12.2□□□□□ -0.46
TMEM53-209ENST00000495630 SLC25A39Q9BZJ4 359 aaPredicted RBP12.2□□□□□ -0.46
TMEM53-209ENST00000495630 Q9H3A6 140 aa12.2□□□□□ -0.46
TMEM53-209ENST00000495630 PAIP2BQ9ULR5 123 aaKnown RBP12.2□□□□□ -0.46
TMEM53-209ENST00000495630 A0A1W2PPQ1 181 aa12.19□□□□□ -0.46
TMEM53-209ENST00000495630 RGS5O15539 181 aa12.19□□□□□ -0.46
TMEM53-209ENST00000495630 MED6O75586 246 aa12.19□□□□□ -0.46
TMEM53-209ENST00000495630 HTN1P15515 57 aa12.19□□□□□ -0.46
TMEM53-209ENST00000495630 KRTAP10-2P60368 255 aa12.19□□□□□ -0.46
TMEM53-209ENST00000495630 RHOBP62745 196 aa12.19□□□□□ -0.46
TMEM53-209ENST00000495630 FGL1Q08830 312 aa12.19□□□□□ -0.46
TMEM53-209ENST00000495630 ZNF738Q8NE65 137 aa12.19□□□□□ -0.46
TMEM53-209ENST00000495630 OR10J6PQ8NGY7 276 aa12.19□□□□□ -0.46
TMEM53-209ENST00000495630 NAA50Q9GZZ1 169 aaKnown RBP12.19□□□□□ -0.46
TMEM53-209ENST00000495630 PPP1R14DQ9NXH3 145 aa12.19□□□□□ -0.46
TMEM53-209ENST00000495630 RABL2AQ9UBK7 228 aaPredicted RBP12.19□□□□□ -0.46
TMEM53-209ENST00000495630 RABL2BQ9UNT1 228 aa12.19□□□□□ -0.46
TMEM53-209ENST00000495630 DUXBA0A1W2PPF3 345 aa12.18□□□□□ -0.46
TMEM53-209ENST00000495630 ANKRD20A5PA0PJZ0 165 aa12.18□□□□□ -0.46
TMEM53-209ENST00000495630 CTDSP2O14595 271 aa12.18□□□□□ -0.46
TMEM53-209ENST00000495630 IAPPP10997 89 aa12.18□□□□□ -0.46
TMEM53-209ENST00000495630 SLC25A6P12236 298 aa12.18□□□□□ -0.46
TMEM53-209ENST00000495630 GATA2P23769 480 aaPredicted RBP12.18□□□□□ -0.46
TMEM53-209ENST00000495630 TMEM182Q6ZP80 229 aaPredicted RBP12.18□□□□□ -0.46
TMEM53-209ENST00000495630 OR8A1Q8NGG7 326 aa12.18□□□□□ -0.46
TMEM53-209ENST00000495630 RXFP4Q8TDU9 374 aa12.18□□□□□ -0.46
TMEM53-209ENST00000495630 GNPNAT1Q96EK6 184 aaPredicted RBP12.18□□□□□ -0.46
TMEM53-209ENST00000495630 CIB3Q96Q77 187 aaPredicted RBP12.18□□□□□ -0.46
TMEM53-209ENST00000495630 UPK3BQ9BT76 320 aa12.18□□□□□ -0.46
TMEM53-209ENST00000495630 KRTAP1-5Q9BYS1 174 aa12.18□□□□□ -0.46
TMEM53-209ENST00000495630 NOP10Q9NPE3 64 aaKnown RBP12.18□□□□□ -0.46
TMEM53-209ENST00000495630 DNAH5Q8TE73 4624 aa12.18□□□□□ -0.46
TMEM53-209ENST00000495630 APOBP04114 4563 aaKnown RBP12.18□□□□□ -0.46
TMEM53-209ENST00000495630 PRSS46E5RG02 174 aa12.17□□□□□ -0.46
TMEM53-209ENST00000495630 OR5I1Q13606 314 aa12.17□□□□□ -0.46
TMEM53-209ENST00000495630 TRAV26-1A0A087WT03 109 aa12.16□□□□□ -0.46
TMEM53-209ENST00000495630 EPM2AB3EWF7 344 aa12.16□□□□□ -0.46
TMEM53-209ENST00000495630 ADAP1O75689 374 aa12.16□□□□□ -0.46
TMEM53-209ENST00000495630 RPL7P18124 248 aaKnown RBP12.16□□□□□ -0.46
TMEM53-209ENST00000495630 M6PRP20645 277 aa12.16□□□□□ -0.46
TMEM53-209ENST00000495630 HIST1H1AQ02539 215 aaPredicted RBP12.16□□□□□ -0.46
TMEM53-209ENST00000495630 PSG3Q16557 428 aa12.16□□□□□ -0.46
TMEM53-209ENST00000495630 RNASE8Q8TDE3 154 aaKnown RBP12.16□□□□□ -0.46
TMEM53-209ENST00000495630 TMEM263Q8WUH6 116 aaKnown RBP12.16□□□□□ -0.46
TMEM53-209ENST00000495630 UHRF2Q96PU4 802 aa12.16□□□□□ -0.46
TMEM53-209ENST00000495630 SHANK2-AS3Q9BTD1 123 aa12.16□□□□□ -0.46
TMEM53-209ENST00000495630 H3BNG1 76 aa12.15□□□□□ -0.46
TMEM53-209ENST00000495630 H3BRN7 92 aa12.15□□□□□ -0.46
TMEM53-209ENST00000495630 CXCL3P19876 107 aa12.15□□□□□ -0.46
TMEM53-209ENST00000495630 CDKN1BP46527 198 aa12.15□□□□□ -0.46
TMEM53-209ENST00000495630 IL18Q14116 193 aa12.15□□□□□ -0.46
TMEM53-209ENST00000495630 ESRGQ1W209 222 aa12.15□□□□□ -0.46
TMEM53-209ENST00000495630 DIRAS2Q96HU8 199 aa12.15□□□□□ -0.46
TMEM53-209ENST00000495630 PGPEP1Q9NXJ5 209 aa12.15□□□□□ -0.46
TMEM53-209ENST00000495630 H7BYZ3 331 aa12.14□□□□□ -0.47
TMEM53-209ENST00000495630 SYNGR2O43760 224 aa12.14□□□□□ -0.47
TMEM53-209ENST00000495630 RAP2BP61225 183 aa12.14□□□□□ -0.47
TMEM53-209ENST00000495630 LINC00612Q8N6U2 182 aa12.14□□□□□ -0.47
TMEM53-209ENST00000495630 LRTM2Q8N967 370 aa12.14□□□□□ -0.47
TMEM53-209ENST00000495630 LRRC20Q8TCA0 184 aa12.14□□□□□ -0.47
TMEM53-209ENST00000495630 C20orf144Q9BQM9 153 aa12.14□□□□□ -0.47
TMEM53-209ENST00000495630 MCUBQ9NWR8 336 aa12.14□□□□□ -0.47
TMEM53-209ENST00000495630 HIGD1AQ9Y241 93 aa12.14□□□□□ -0.47
TMEM53-209ENST00000495630 MRPS16Q9Y3D3 137 aaKnown RBP12.14□□□□□ -0.47
TMEM53-209ENST00000495630 HERC1Q15751 4861 aa12.14□□□□□ -0.47
TMEM53-209ENST00000495630 A0A087X0K7 114 aa12.13□□□□□ -0.47
TMEM53-209ENST00000495630 ZNF701M0R085 212 aaPredicted RBP12.13□□□□□ -0.47
TMEM53-209ENST00000495630 WRBO00258 174 aa12.13□□□□□ -0.47
TMEM53-209ENST00000495630 HYPMO75409 117 aa12.13□□□□□ -0.47
TMEM53-209ENST00000495630 IL5P05113 134 aa12.13□□□□□ -0.47
TMEM53-209ENST00000495630 PLP1P60201 277 aa12.13□□□□□ -0.47
TMEM53-209ENST00000495630 AKR1C1Q04828 323 aa12.13□□□□□ -0.47
TMEM53-209ENST00000495630 TMEM128Q5BJH2 165 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms