RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 SLC25A33Q9BSK2 321 aa14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 WNT10AQ9GZT5 417 aa14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 MRPL36Q9P0J6 103 aaKnown RBP14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 ANKRD17O75179 2603 aaKnown RBP14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 TRAV40A0A0B4J280 105 aa14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 TMEM136Q6ZRR5 245 aa14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 C19orf35Q6ZS72 473 aa14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 MIR17HGQ75NE6 70 aa14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 Q8N9W7 124 aa14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 NRN1Q9NPD7 142 aa14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 OSTCQ9NRP0 149 aa14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 TMEM167BQ9NRX6 74 aa14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 IGKV1D-37A0A075B6S9 117 aa14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 HLA-DRB1P01911 266 aa14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 OR5G3P0C626 314 aa14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 C7orf69Q9H7B7 122 aa14.63□□□□□ -0.07
TSPAN4-212ENST00000494815 A0A096LNT2 108 aa14.62□□□□□ -0.07
TSPAN4-212ENST00000494815 NPIPB5A8MRT5 1133 aa14.62□□□□□ -0.07
TSPAN4-212ENST00000494815 CCL25O15444 150 aa14.62□□□□□ -0.07
TSPAN4-212ENST00000494815 IGHV3-48P01763 117 aa14.62□□□□□ -0.07
TSPAN4-212ENST00000494815 GATA2P23769 480 aaPredicted RBP14.62□□□□□ -0.07
TSPAN4-212ENST00000494815 TFPI2P48307 235 aa14.62□□□□□ -0.07
TSPAN4-212ENST00000494815 AMTP48728 403 aa14.62□□□□□ -0.07
TSPAN4-212ENST00000494815 PTTG1IPP53801 180 aa14.62□□□□□ -0.07
TSPAN4-212ENST00000494815 PQLC2Q6ZP29 291 aa14.62□□□□□ -0.07
TSPAN4-212ENST00000494815 LRRC75A-AS1Q8N1F1 130 aa14.62□□□□□ -0.07
TSPAN4-212ENST00000494815 C20orf202A1L168 122 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 CIDEAO60543 219 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 ZNF253O75346 499 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 PLA2G2AP14555 144 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 CRYBB3P26998 211 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 KRTAP10-9P60411 292 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 SUMO1P63165 101 aaKnown RBP14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 SPATA45Q537H7 98 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 RUSC1-AS1Q66K80 236 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 TRGV9Q99603 122 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 HIF1ANQ9NWT6 349 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 A0A1W2PS18 150 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 I3L2K1 104 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 C16orf54Q6UWD8 224 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 RNASE7Q9H1E1 156 aaKnown RBP14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 TNFRSF19Q9NS68 423 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 CENPEQ02224 2701 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 VPS13CQ709C8 3753 aa14.61□□□□□ -0.07
TSPAN4-212ENST00000494815 PSMB11A5LHX3 300 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 J3QKU1 62 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 PPBPP02775 128 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 AMY1AP04745 511 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 NDPQ00604 133 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 DEFB113Q30KQ7 82 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 TIGITQ495A1 244 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 RCHY1Q96PM5 261 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 RASL11BQ9BPW5 248 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 MRPL32Q9BYC8 188 aaKnown RBP14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 MEGF9Q9H1U4 602 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 IGHV7-81A0A0B4J1V7 117 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 ISLRO14498 428 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 SPINK4O60575 86 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 HLA-DQA1P01909 254 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 TTC9CQ8N5M4 171 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 LINC01356Q8N9X3 169 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 UQCR10Q9UDW1 63 aa14.6□□□□□ -0.07
TSPAN4-212ENST00000494815 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.59□□□□□ -0.075e-9■■□□□ 11.5
TSPAN4-212ENST00000494815 POLQO75417 2590 aa14.59□□□□□ -0.07
TSPAN4-212ENST00000494815 IGHV3OR16-10A0A075B7F0 116 aa14.59□□□□□ -0.07
TSPAN4-212ENST00000494815 ZNF324O75467 553 aaPredicted RBP14.59□□□□□ -0.07
TSPAN4-212ENST00000494815 PMCHP20382 165 aa14.59□□□□□ -0.07
TSPAN4-212ENST00000494815 TAS2R45P59539 299 aa14.59□□□□□ -0.07
TSPAN4-212ENST00000494815 KIAA1644Q3SXP7 199 aa14.59□□□□□ -0.07
TSPAN4-212ENST00000494815 ASPHD1Q5U4P2 390 aa14.59□□□□□ -0.07
TSPAN4-212ENST00000494815 BRD3OSQ6XYD6 125 aa14.59□□□□□ -0.07
TSPAN4-212ENST00000494815 OR1L4Q8NGR5 311 aa14.59□□□□□ -0.07
TSPAN4-212ENST00000494815 TECRQ9NZ01 308 aaKnown RBP14.59□□□□□ -0.07
TSPAN4-212ENST00000494815 CELSR2Q9HCU4 2923 aa14.59□□□□□ -0.07
TSPAN4-212ENST00000494815 NAV2Q8IVL1 2488 aa14.59□□□□□ -0.07
TSPAN4-212ENST00000494815 HSBP1L1C9JCN9 74 aa14.58□□□□□ -0.07
TSPAN4-212ENST00000494815 IGHV4-38-2P0DP08 117 aa14.58□□□□□ -0.07
TSPAN4-212ENST00000494815 SMIM15Q7Z3B0 74 aa14.58□□□□□ -0.07
TSPAN4-212ENST00000494815 SMIM27A0A1W2PRY6 76 aa14.58□□□□□ -0.08
TSPAN4-212ENST00000494815 BMPR1BO00238 502 aa14.58□□□□□ -0.08
TSPAN4-212ENST00000494815 SRIP30626 198 aa14.58□□□□□ -0.08
TSPAN4-212ENST00000494815 LOXL1Q08397 574 aaPredicted RBP14.58□□□□□ -0.08
TSPAN4-212ENST00000494815 NUDT10Q8NFP7 164 aa14.58□□□□□ -0.08
TSPAN4-212ENST00000494815 ZNF503Q96F45 646 aa14.58□□□□□ -0.08
TSPAN4-212ENST00000494815 K7EIM0 57 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 COX7A2P2O60397 106 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 IGLV2-8P01709 118 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 IGLC2P0DOY2 106 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 IGLC3P0DOY3 106 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 IBA57Q5T440 356 aaKnown RBP14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 NIT1Q86X76 327 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 CDC42EP3Q9UKI2 254 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 IGHV3-21A0A0B4J1V1 117 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 NDUFB8O95169 186 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 C3orf79P0CE67 100 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 TCL1AP56279 114 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 SLC35B1P78383 322 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 IGF2BP2-AS1Q96M15 143 aa14.57□□□□□ -0.08
TSPAN4-212ENST00000494815 ABCA1O95477 2261 aa14.56□□□□□ -0.08
TSPAN4-212ENST00000494815 ABCA12Q86UK0 2595 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms