RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SFXN4Q6P4A7 337 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 BAP18Q8IXM2 172 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 UBL4BQ8N7F7 174 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 ZCCHC13Q8WW36 166 aaKnown RBP1.94□□□□□ -2.1
SMC4-224ENST00000494612 KIFC1Q9BW19 673 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 BPESC1Q9GZL8 116 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 CXorf21Q9HAI6 301 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 MED29Q9NX70 200 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 PAQR5Q9NXK6 330 aaPredicted RBP1.94□□□□□ -2.1
SMC4-224ENST00000494612 ZNF337Q9Y3M9 751 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 PKD1L1Q8TDX9 2849 aa1.94□□□□□ -2.1
SMC4-224ENST00000494612 FREM1Q5H8C1 2179 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.93□□□□□ -2.12e-8■■■■■ 31.6
SMC4-224ENST00000494612 LINC00862A6NCI5 91 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 CLDN24A6NM45 220 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 B4DSR2 109 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 M0R381 172 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 PIN1P1O15428 100 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 SLC25A20O43772 301 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 LYZL6O75951 148 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 OPN1SWP03999 348 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 CLPSP04118 112 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 ALOX5APP20292 161 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 GZMHP20718 246 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 OR10J1P30954 320 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 AKR1C2P52895 323 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 SARNPP82979 210 aaKnown RBP1.93□□□□□ -2.1
SMC4-224ENST00000494612 EMX1Q04741 257 aaPredicted RBP1.93□□□□□ -2.1
SMC4-224ENST00000494612 C1orf194Q5T5A4 169 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 C4orf22Q6V702 233 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 SSX8Q7RTT4 187 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 C1orf174Q8IYL3 243 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 TEX29Q8N6K0 151 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 CLDN22Q8N7P3 220 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 OR52R1Q8NGF1 315 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 C12orf43Q96C57 262 aaKnown RBP1.93□□□□□ -2.1
SMC4-224ENST00000494612 EFCAB11Q9BUY7 163 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 C1QTNF6Q9BXI9 259 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 MED11Q9P086 117 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 FBXO5Q9UKT4 447 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 MALRD1Q5VYJ5 2156 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 PLXNB1O43157 2135 aa1.93□□□□□ -2.1
SMC4-224ENST00000494612 BIRC6Q9NR09 4857 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 TENM1Q9UKZ4 2725 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 C17orf51A8MQB3 221 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 MIF4GDA9UHW6 222 aaKnown RBP1.92□□□□□ -2.1
SMC4-224ENST00000494612 G3V3Q6 166 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 DENRO43583 198 aaKnown RBP1.92□□□□□ -2.1
SMC4-224ENST00000494612 MT-CO2P00403 227 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 MSMBP08118 114 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 CPMP14384 443 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 SERPINB1P30740 379 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 DAPP51397 102 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 RANP62826 216 aaKnown RBP1.92□□□□□ -2.1
SMC4-224ENST00000494612 UBA52P62987 128 aaKnown RBP1.92□□□□□ -2.1
SMC4-224ENST00000494612 PSG4Q00888 419 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 OR8G1Q15617 311 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 OR2T27Q8NH04 317 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 C1orf54Q8WWF1 131 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 C20orf166-AS1Q96NR2 134 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 DYNLRB1Q9NP97 96 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 ARL2BPQ9Y2Y0 163 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 MRPS16Q9Y3D3 137 aaKnown RBP1.92□□□□□ -2.1
SMC4-224ENST00000494612 PXMP4Q9Y6I8 212 aa1.92□□□□□ -2.1
SMC4-224ENST00000494612 EPPK1P58107 5090 aaKnown RBP1.91□□□□□ -2.1
SMC4-224ENST00000494612 MED12Q93074 2177 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 A0A0J9YW62 118 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 IGSF23A1L1A6 192 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 ATP6V1G2-DDX39BF2Z307 99 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 CNIH1O95406 144 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 CD79AP11912 226 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 TAS2R45P59539 299 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 RAB5BP61020 215 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 PSPHP78330 225 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 FABP9Q0Z7S8 132 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 FOXF1Q12946 379 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 PMAIP1Q13794 54 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 TSNQ15631 228 aaKnown RBP1.91□□□□□ -2.1
SMC4-224ENST00000494612 ZNF181Q2M3W8 571 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 CCDC121Q6ZUS5 278 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 PACRGLQ8N7B6 248 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 SIGLECL1Q8N7X8 197 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 CLDND2Q8NHS1 167 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 SLC35B4Q969S0 331 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 CEP19Q96LK0 163 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 TBX5Q99593 518 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 ASB4Q9Y574 426 aa1.91□□□□□ -2.1
SMC4-224ENST00000494612 VWFP04275 2813 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 IGHV3-15A0A0B4J1V0 119 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 A0A1B0GV50 99 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 SMIM9A6NGZ8 99 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 DISC1C4P0D8 188 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 LYNX1G3V0Z9 82 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 UBE2L6O14933 153 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 SULT1B1O43704 296 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 FADS1O60427 444 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 SERPINA1P01009 418 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 CRYGDP07320 174 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 CD7P09564 240 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 LYNX1P0DP58 116 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms