RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 EEF1AKMT3Q96AZ1 226 aa12.83□□□□□ -0.36
ATG4B-225ENST00000494465 NOL4LQ96MY1 436 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-225ENST00000494465 IMMP2LQ96T52 175 aa12.83□□□□□ -0.36
ATG4B-225ENST00000494465 KLF12Q9Y4X4 402 aa12.83□□□□□ -0.36
ATG4B-225ENST00000494465 TEX15Q9BXT5 2789 aa12.82□□□□□ -0.36
ATG4B-225ENST00000494465 TRBV7-1A0A0A6YYK4 115 aa12.82□□□□□ -0.36
ATG4B-225ENST00000494465 IGHV3-35A0A0C4DH35 117 aa12.82□□□□□ -0.36
ATG4B-225ENST00000494465 CLEC19AQ6UXS0 136 aa12.82□□□□□ -0.36
ATG4B-225ENST00000494465 ZFAND3Q9H8U3 227 aa12.82□□□□□ -0.36
ATG4B-225ENST00000494465 OTORQ9NRC9 128 aa12.82□□□□□ -0.36
ATG4B-225ENST00000494465 PHOX2AO14813 284 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 TMEM183BQ1AE95 376 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 TOMM20LQ6UXN7 152 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 EXOC3-AS1Q8N2X6 119 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 A0A1W2PPQ1 181 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 FAM223BA6NKX1 122 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 BRI3O95415 125 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 TRGC2P03986 189 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 IER3P46695 156 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 FAM3BP58499 235 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-225ENST00000494465 FOXL1Q12952 345 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 FAM223AQ8IWN6 122 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 OR4F17Q8NGA8 305 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 ATG101Q9BSB4 218 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 GAR1Q9NY12 217 aaKnown RBP12.81□□□□□ -0.36
ATG4B-225ENST00000494465 V9GYV3 84 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 MXRA5Q9NR99 2828 aa12.81□□□□□ -0.36
ATG4B-225ENST00000494465 TGOLN2O43493 480 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 TCRAP04437 139 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 ATP5G2Q06055 141 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 SIGLEC15Q6ZMC9 328 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 C9orf139Q6ZV77 190 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 S100A7AQ86SG5 101 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 NHLRC2Q8NBF2 726 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 SAV1Q9H4B6 383 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-225ENST00000494465 BIN3Q9NQY0 253 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 RABAC1Q9UI14 185 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 RNF24Q9Y225 148 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 IGHV3OR16-8A0A075B7F1 116 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 SLC17A3O00476 420 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 TRGV3P03979 118 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 RNASE7Q9H1E1 156 aaKnown RBP12.8□□□□□ -0.36
ATG4B-225ENST00000494465 SRD5A3Q9H8P0 318 aa12.8□□□□□ -0.36
ATG4B-225ENST00000494465 ITPR3Q14573 2671 aa12.79□□□□□ -0.36
ATG4B-225ENST00000494465 ERVFC1-1P60608 527 aa12.79□□□□□ -0.36
ATG4B-225ENST00000494465 KCNIP4Q6PIL6 250 aa12.79□□□□□ -0.36
ATG4B-225ENST00000494465 PDZD2O15018 2839 aa12.79□□□□□ -0.36
ATG4B-225ENST00000494465 C5orf52A6NGY3 159 aa12.79□□□□□ -0.36
ATG4B-225ENST00000494465 BMPR1BO00238 502 aa12.79□□□□□ -0.36
ATG4B-225ENST00000494465 TYMSP04818 313 aa12.79□□□□□ -0.36
ATG4B-225ENST00000494465 BAGE2Q86Y30 109 aa12.79□□□□□ -0.36
ATG4B-225ENST00000494465 SGK494Q96LW2 274 aa12.79□□□□□ -0.36
ATG4B-225ENST00000494465 ATP6V0BQ99437 205 aa12.79□□□□□ -0.36
ATG4B-225ENST00000494465 OSTCQ9NRP0 149 aa12.79□□□□□ -0.36
ATG4B-225ENST00000494465 RPH3ALQ9UNE2 315 aa12.79□□□□□ -0.36
ATG4B-225ENST00000494465 CLPSL1A2RUU4 121 aa12.78□□□□□ -0.36
ATG4B-225ENST00000494465 AP4M1O00189 453 aa12.78□□□□□ -0.36
ATG4B-225ENST00000494465 SNRPEP62304 92 aaKnown RBP12.78□□□□□ -0.36
ATG4B-225ENST00000494465 CFHR3Q02985 330 aa12.78□□□□□ -0.36
ATG4B-225ENST00000494465 H3BUA1 57 aa12.78□□□□□ -0.36
ATG4B-225ENST00000494465 MGST1P10620 155 aaKnown RBP12.78□□□□□ -0.36
ATG4B-225ENST00000494465 LYPD1Q8N2G4 141 aa12.78□□□□□ -0.36
ATG4B-225ENST00000494465 GNB4Q9HAV0 340 aa12.78□□□□□ -0.36
ATG4B-225ENST00000494465 IL36BQ9NZH7 164 aa12.78□□□□□ -0.36
ATG4B-225ENST00000494465 PPP5D1E7EU14 171 aa12.77□□□□□ -0.36
ATG4B-225ENST00000494465 IGLV1-40P01703 118 aa12.77□□□□□ -0.36
ATG4B-225ENST00000494465 TPPP2P59282 170 aa12.77□□□□□ -0.36
ATG4B-225ENST00000494465 RPL15P61313 204 aaKnown RBP12.77□□□□□ -0.36
ATG4B-225ENST00000494465 CYB5R2Q6BCY4 276 aa12.77□□□□□ -0.36
ATG4B-225ENST00000494465 WFDC11Q8NEX6 87 aa12.77□□□□□ -0.36
ATG4B-225ENST00000494465 MLST8Q9BVC4 326 aa12.77□□□□□ -0.36
ATG4B-225ENST00000494465 KLK15Q9H2R5 256 aa12.77□□□□□ -0.36
ATG4B-225ENST00000494465 SMAD5-AS1Q9Y6J3 95 aa12.77□□□□□ -0.36
ATG4B-225ENST00000494465 HIST1H2BKO60814 126 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 HIST1H2BJP06899 126 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 HIST1H2BOP23527 126 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 HIST1H2BBP33778 126 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 HIST1H2BDP58876 126 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 UBE2G1P62253 170 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 HIST1H2BCP62807 126 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 PDE6HQ13956 83 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 HIST2H2BEQ16778 126 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-225ENST00000494465 CIARTQ8N365 385 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-225ENST00000494465 FRZBQ92765 325 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 HIST1H2BHQ93079 126 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 FMC1Q96HJ9 113 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 HIST1H2BNQ99877 126 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 HIST1H2BMQ99879 126 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 ZNF580Q9UK33 172 aa12.77□□□□□ -0.37
ATG4B-225ENST00000494465 IGLV2-11P01706 119 aa12.76□□□□□ -0.37
ATG4B-225ENST00000494465 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
ATG4B-225ENST00000494465 Q6YL49 198 aa12.76□□□□□ -0.37
ATG4B-225ENST00000494465 LTAP01374 205 aa12.76□□□□□ -0.37
ATG4B-225ENST00000494465 S100A9P06702 114 aaKnown RBP12.76□□□□□ -0.37
ATG4B-225ENST00000494465 TMEM95Q3KNT9 176 aa12.76□□□□□ -0.37
ATG4B-225ENST00000494465 IBA57Q5T440 356 aaKnown RBP12.76□□□□□ -0.37
ATG4B-225ENST00000494465 OR5R1Q8NH85 324 aa12.76□□□□□ -0.37
ATG4B-225ENST00000494465 TMEM190Q8WZ59 177 aa12.76□□□□□ -0.37
ATG4B-225ENST00000494465 GPR82Q96P67 336 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms