RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TUBA4BQ9H853 241 aa9.91□□□□□ -0.82
ERCC3-209ENST00000494464 DAZ1Q9NQZ3 744 aaKnown RBP9.91□□□□□ -0.82
ERCC3-209ENST00000494464 SLC39A9Q9NUM3 307 aa9.91□□□□□ -0.82
ERCC3-209ENST00000494464 PXMP4Q9Y6I8 212 aa9.91□□□□□ -0.82
ERCC3-209ENST00000494464 DNAH7Q8WXX0 4024 aa9.91□□□□□ -0.82
ERCC3-209ENST00000494464 IGHV3-21A0A0B4J1V1 117 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 TRAV25A0A0B4J276 109 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 IGHV3-35A0A0C4DH35 117 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 LOC102723971A0A1B0GUV8 181 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 CORTO00230 105 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 NDUFS6O75380 124 aaKnown RBP9.9□□□□□ -0.82
ERCC3-209ENST00000494464 IFNA1P01562 189 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 CD7P09564 240 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 TAGLN2P37802 199 aaKnown RBP9.9□□□□□ -0.82
ERCC3-209ENST00000494464 PRR20EP86478 221 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 PRR20CP86479 221 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 PRR20DP86480 221 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 PRR20BP86481 221 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 PRR20AP86496 221 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 GUCA2BQ16661 112 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 Q56UQ5 140 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 KHDC3LQ587J8 217 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 LCN15Q6UWW0 184 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 LINC00322Q6ZN03 302 aaPredicted RBP9.9□□□□□ -0.82
ERCC3-209ENST00000494464 SLC35E1Q96K37 410 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 TXN2Q99757 166 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 SPATA25Q9BR10 227 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 CHRDL1Q9BU40 450 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 SLC35B3Q9H1N7 401 aa9.9□□□□□ -0.82
ERCC3-209ENST00000494464 A0A1B0GV50 99 aa9.89□□□□□ -0.83
ERCC3-209ENST00000494464 YIF1AO95070 293 aa9.89□□□□□ -0.83
ERCC3-209ENST00000494464 BCL2P10415 239 aa9.89□□□□□ -0.83
ERCC3-209ENST00000494464 CDC34P49427 236 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-209ENST00000494464 PPT1P50897 306 aa9.89□□□□□ -0.83
ERCC3-209ENST00000494464 RELQ04864 619 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-209ENST00000494464 GAMTQ14353 236 aa9.89□□□□□ -0.83
ERCC3-209ENST00000494464 ICAM4Q14773 271 aa9.89□□□□□ -0.83
ERCC3-209ENST00000494464 HAGHQ16775 308 aa9.89□□□□□ -0.83
ERCC3-209ENST00000494464 ETFRF1Q6IPR1 90 aa9.89□□□□□ -0.83
ERCC3-209ENST00000494464 FAM122CQ6P4D5 195 aa9.89□□□□□ -0.83
ERCC3-209ENST00000494464 MISP3Q96FF7 219 aa9.89□□□□□ -0.83
ERCC3-209ENST00000494464 SLC25A22Q9H936 323 aa9.89□□□□□ -0.83
ERCC3-209ENST00000494464 OR11H12B2RN74 326 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 C3orf84H3BNL1 204 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 K7EMT4 169 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 NUPL2O15504 423 aaKnown RBP9.88□□□□□ -0.83
ERCC3-209ENST00000494464 SCO1O75880 301 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 SNAPINO95295 136 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 MT-CO2P00403 227 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 CTSGP08311 255 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 MFAP4P55083 255 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 B2MP61769 119 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 MIC13Q5XKP0 118 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 STPG3Q8N7X2 389 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 RAB24Q969Q5 203 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 ZNF414Q96IQ9 312 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 NKX6-2Q9C056 277 aaPredicted RBP9.88□□□□□ -0.83
ERCC3-209ENST00000494464 MANBALQ9NQG1 85 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 SLC45A2Q9UMX9 530 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 SRP19P09132 144 aaKnown RBP9.88□□□□□ -0.83
ERCC3-209ENST00000494464 RBPMS2Q6ZRY4 209 aaKnown RBP9.88□□□□□ -0.83
ERCC3-209ENST00000494464 DEFB125Q8N687 156 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 THAP8Q8NA92 274 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 SPAG8Q99932 426 aaPredicted RBP9.88□□□□□ -0.83
ERCC3-209ENST00000494464 RARRES2Q99969 163 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 WFDC10AQ9H1F0 79 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 SRD5A3Q9H8P0 318 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 GNG13Q9P2W3 67 aa9.88□□□□□ -0.83
ERCC3-209ENST00000494464 IGKV1OR2-108A0A075B7D4 117 aa9.87□□□□□ -0.83
ERCC3-209ENST00000494464 TSPAN4O14817 238 aa9.87□□□□□ -0.83
ERCC3-209ENST00000494464 PSMB3P49720 205 aa9.87□□□□□ -0.83
ERCC3-209ENST00000494464 FGF8P55075 233 aaPredicted RBP9.87□□□□□ -0.83
ERCC3-209ENST00000494464 ATRAIDQ6UW56 229 aa9.87□□□□□ -0.83
ERCC3-209ENST00000494464 MUC7Q8TAX7 377 aa9.87□□□□□ -0.83
ERCC3-209ENST00000494464 C20orf24Q9BUV8 137 aa9.87□□□□□ -0.83
ERCC3-209ENST00000494464 FNDC4Q9H6D8 234 aaPredicted RBP9.87□□□□□ -0.83
ERCC3-209ENST00000494464 VAX2Q9UIW0 290 aa9.87□□□□□ -0.83
ERCC3-209ENST00000494464 SELENOKQ9Y6D0 94 aa9.87□□□□□ -0.83
ERCC3-209ENST00000494464 A0A1W2PPV4 95 aa9.86□□□□□ -0.83
ERCC3-209ENST00000494464 RBMY1BA6NDE4 496 aaKnown RBP9.86□□□□□ -0.83
ERCC3-209ENST00000494464 RBMY1EA6NEQ0 496 aaKnown RBP9.86□□□□□ -0.83
ERCC3-209ENST00000494464 ZFP92A6NM28 416 aa9.86□□□□□ -0.83
ERCC3-209ENST00000494464 GNG7O60262 68 aa9.86□□□□□ -0.83
ERCC3-209ENST00000494464 RBMY1DP0C7P1 496 aaKnown RBP9.86□□□□□ -0.83
ERCC3-209ENST00000494464 LINC00869P0C866 280 aa9.86□□□□□ -0.83
ERCC3-209ENST00000494464 STAG3L2P0CL84 134 aa9.86□□□□□ -0.83
ERCC3-209ENST00000494464 STAG3L3P0CL85 134 aa9.86□□□□□ -0.83
ERCC3-209ENST00000494464 OR10J1P30954 320 aa9.86□□□□□ -0.83
ERCC3-209ENST00000494464 RHOBP62745 196 aa9.86□□□□□ -0.83
ERCC3-209ENST00000494464 RXFP4Q8TDU9 374 aa9.86□□□□□ -0.83
ERCC3-209ENST00000494464 EDA2RQ9HAV5 297 aa9.86□□□□□ -0.83
ERCC3-209ENST00000494464 NPBWR1P48145 328 aa9.85□□□□□ -0.83
ERCC3-209ENST00000494464 SELENOTP62341 195 aa9.85□□□□□ -0.83
ERCC3-209ENST00000494464 GCSAMLQ5JQS6 135 aa9.85□□□□□ -0.83
ERCC3-209ENST00000494464 SOHLH1Q5JUK2 328 aa9.85□□□□□ -0.83
ERCC3-209ENST00000494464 CYP2G1PQ6ZSU1 146 aa9.85□□□□□ -0.83
ERCC3-209ENST00000494464 TMEM116Q8NCL8 245 aa9.85□□□□□ -0.83
ERCC3-209ENST00000494464 CLRN3Q8NCR9 226 aa9.85□□□□□ -0.83
ERCC3-209ENST00000494464 IGKV1D-37A0A075B6S9 117 aa9.84□□□□□ -0.83
ERCC3-209ENST00000494464 IGHV3OR16-8A0A075B7F1 116 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms