RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 RELQ04864 619 aaPredicted RBP5.23□□□□□ -1.57
MSH5-217ENST00000494458 BTN1A1Q13410 526 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 FOXE3Q13461 319 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 Q56UQ5 140 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 C1orf194Q5T5A4 169 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 ZNF329Q86UD4 541 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 BPIFA4PQ86YQ2 179 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 SIGLECL1Q8N7X8 197 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 WFDC12Q8WWY7 111 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 HIST1H2BAQ96A08 127 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 ELOVL1Q9BW60 279 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 NPFFR1Q9GZQ6 430 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 ZNF586Q9NXT0 402 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 LINC00527Q9UJ94 153 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 PUS1Q9Y606 427 aaKnown RBP eCLIP5.23□□□□□ -1.57
MSH5-217ENST00000494458 OTOGQ6ZRI0 2925 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 HECTD1Q9ULT8 2610 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 A0A087X0K7 114 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 SCO2A0A1W2PP80 73 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 K7EMT4 169 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 NDUFA4O00483 81 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 IGLV2-8P01709 118 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 OR10J4P0C629 311 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 S100A7P31151 101 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 GPR183P32249 361 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 UBE2G2P60604 165 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 LYZP61626 148 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 SUMO1P63165 101 aaKnown RBP5.22□□□□□ -1.57
MSH5-217ENST00000494458 UBE2L3P68036 154 aaKnown RBP5.22□□□□□ -1.57
MSH5-217ENST00000494458 CST9LP1Q5W188 147 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 CLEC19AQ6UXS0 136 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 SIGLEC15Q6ZMC9 328 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 LINC01551Q86U37 167 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 GPHB5Q86YW7 130 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 SMIM12Q96EX1 92 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 MS4A10Q96PG2 267 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 SMIM7Q9BQ49 75 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 DERL1Q9BUN8 251 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 MLST8Q9BVC4 326 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 CTDSP1Q9GZU7 261 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 C16orf95Q9H693 158 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 OTORQ9NRC9 128 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 SMCO4Q9NRQ5 59 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 CDC42EP3Q9UKI2 254 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 EPDR1Q9UM22 224 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 PRELID1Q9Y255 219 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 SMAD5-AS1Q9Y6J3 95 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 S4R3C0 116 aa5.22□□□□□ -1.57
MSH5-217ENST00000494458 ZNF785A8K8V0 405 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 BMPR1BO00238 502 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 SMAD7O15105 426 aaKnown RBP5.21□□□□□ -1.58
MSH5-217ENST00000494458 IGHV3-23P01764 117 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 S100A9P06702 114 aaKnown RBP5.21□□□□□ -1.58
MSH5-217ENST00000494458 RNASE1P07998 156 aaKnown RBP5.21□□□□□ -1.58
MSH5-217ENST00000494458 FOLR2P14207 255 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 RPL7P18124 248 aaKnown RBP5.21□□□□□ -1.58
MSH5-217ENST00000494458 C9orf152Q5JTZ5 239 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 LEMD1Q68G75 181 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 TEX38Q6PEX7 206 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 COX8CQ7Z4L0 72 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 C15orf54Q8N8G6 183 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 C5orf17Q8NAS9 161 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 OCC1Q8TAD7 63 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 ISOC2Q96AB3 205 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 UBE2E2Q96LR5 201 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 IGF2BP2-AS1Q96M15 143 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 GPR82Q96P67 336 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 PYGO2Q9BRQ0 406 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 ESM1Q9NQ30 184 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 RABAC1Q9UI14 185 aa5.21□□□□□ -1.58
MSH5-217ENST00000494458 MYO9AB2RTY4 2548 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 HELTA6NFD8 242 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 GGCTO75223 188 aaKnown RBP5.2□□□□□ -1.58
MSH5-217ENST00000494458 GCGP01275 180 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 IGLV2-11P01706 119 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 TRBV12-3P01733 135 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 TCRAP04437 139 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 PFN1P07737 140 aaKnown RBP5.2□□□□□ -1.58
MSH5-217ENST00000494458 RPL35P42766 123 aaKnown RBP5.2□□□□□ -1.58
MSH5-217ENST00000494458 CDX1P47902 265 aaPredicted RBP5.2□□□□□ -1.58
MSH5-217ENST00000494458 MEOX2P50222 304 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 TPPP2P59282 170 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 HILS1P60008 231 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 RANP62826 216 aaKnown RBP5.2□□□□□ -1.58
MSH5-217ENST00000494458 SCGB2A2Q13296 93 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 TMEM183BQ1AE95 376 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 TMEM95Q3KNT9 176 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 RNF212Q495C1 297 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 C16orf54Q6UWD8 224 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 Q6ZSV7 163 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 CBLN2Q8IUK8 224 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 IQCF2Q8IXL9 164 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 OR4X2Q8NGF9 303 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 GLMPQ8WWB7 406 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 ANAPC16Q96DE5 110 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 IMMP2LQ96T52 175 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 Q9H3A6 140 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 RPS10P5Q9NQ39 176 aa5.2□□□□□ -1.58
MSH5-217ENST00000494458 PEF1Q9UBV8 284 aaKnown RBP5.2□□□□□ -1.58
MSH5-217ENST00000494458 ACANP16112 2415 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms