RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 OR52R1Q8NGF1 315 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 GINS4Q9BRT9 223 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 GINS3Q9BRX5 216 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 MRPL40Q9NQ50 206 aaKnown RBP2.07□□□□□ -2.08
CMSS1-207ENST00000494412 ERGIC3Q9Y282 383 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 ASPMQ8IZT6 3477 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 MALRD1Q5VYJ5 2156 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 MAP2P11137 1827 aaKnown RBP2.07□□□□□ -2.08
CMSS1-207ENST00000494412 VPS8Q8N3P4 1428 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 WDR87Q6ZQQ6 2873 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 PTPRBP23467 1997 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 NFAT5O94916 1531 aa2.07□□□□□ -2.08
CMSS1-207ENST00000494412 CFAP46Q8IYW2 2715 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 COL4A6Q14031 1691 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 NRXN2Q9P2S2 1712 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 ANKRD31Q8N7Z5 1873 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 TMSB15BA0A087X1C1 80 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 TRAV4A0A0B4J268 109 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 C1orf196B1AJZ1 125 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 NDUFC2O95298 119 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 C1QBP02746 253 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 PEBP1P30086 187 aaKnown RBP2.06□□□□□ -2.08
CMSS1-207ENST00000494412 TCTAP57738 103 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 CDC42P60953 191 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 GNG5P63218 68 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 HES1Q14469 280 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 SS18Q15532 418 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 ZNF181Q2M3W8 571 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 ZNF791Q3KP31 576 aaPredicted RBP2.06□□□□□ -2.08
CMSS1-207ENST00000494412 AKR1C8PQ5T2L2 129 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 LYRM7Q5U5X0 104 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 C3orf33Q6P1S2 294 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 DNAJC30Q96LL9 226 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 SCGB3A1Q96QR1 104 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 CHST6Q9GZX3 395 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 PCBD2Q9H0N5 130 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 BOLA2Q9H3K6 86 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 PRNDQ9UKY0 176 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 CEP295Q9C0D2 2601 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 MPDZO75970 2070 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 RIC1Q4ADV7 1423 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 ADGRB1O14514 1584 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 CNOT1A5YKK6 2376 aaKnown RBP2.06□□□□□ -2.08
CMSS1-207ENST00000494412 CEP250Q9BV73 2442 aa2.06□□□□□ -2.08
CMSS1-207ENST00000494412 LRRC37A2A6NM11 1700 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 KDM3BQ7LBC6 1761 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 ARFGEF2Q9Y6D5 1785 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 ECM29Q5VYK3 1845 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 CPAMD8Q8IZJ3 1885 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 KIAA2026Q5HYC2 2103 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 SPTAN1Q13813 2472 aaKnown RBP2.05□□□□□ -2.08
CMSS1-207ENST00000494412 TRBV19A0A075B6N1 114 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 A0A1B0GVG6 124 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 J3QQQ9 107 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 J3QRK9 145 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 IFNA7P01567 189 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 NFYAP23511 347 aaPredicted RBP2.05□□□□□ -2.08
CMSS1-207ENST00000494412 PHBP35232 272 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 G6PCP35575 357 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 PIGPP57054 158 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 KRTAP10-10P60014 251 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 RPL26P61254 145 aaKnown RBP2.05□□□□□ -2.08
CMSS1-207ENST00000494412 SNCBQ16143 134 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 FAM27BQ5VT28 67 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 LCA10Q71F78 164 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 MIR17HGQ75NE6 70 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 KTN1-AS1Q86SY8 53 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 TRAPPC6BQ86SZ2 158 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 LRRC28Q86X40 367 aaPredicted RBP2.05□□□□□ -2.08
CMSS1-207ENST00000494412 STX19Q8N4C7 294 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 Q8NDZ9 215 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 TERB2Q8NHR7 220 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 TMEM106AQ96A25 262 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 ZHX1-C8orf76Q96EF9 292 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 BIN3Q9NQY0 253 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 RPL26L1Q9UNX3 145 aaKnown RBP2.05□□□□□ -2.08
CMSS1-207ENST00000494412 ROCK1Q13464 1354 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 KIF24Q5T7B8 1368 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 SCN7AQ01118 1682 aa2.05□□□□□ -2.08
CMSS1-207ENST00000494412 COL5A3P25940 1745 aaPredicted RBP2.05□□□□□ -2.08
CMSS1-207ENST00000494412 FBN3Q75N90 2809 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 TRGV4A0A0C4DH28 118 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 A0A0D9SEW6 157 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 TRBV10-2A0A0K0K1G8 114 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 SSC5DA1L4H1 1573 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 H0YJX3 145 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 BANF1O75531 89 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 MYH3P11055 1940 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 SPI1P17947 270 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 SRIP30626 198 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 SERPINB1P30740 379 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 EP300Q09472 2414 aaPredicted RBP2.04□□□□□ -2.08
CMSS1-207ENST00000494412 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
CMSS1-207ENST00000494412 HIST3H2BBQ8N257 126 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 C11orf40Q8WZ69 217 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 DOHHQ9BU89 302 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 PBDC1Q9BVG4 233 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 OSTCQ9NRP0 149 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 PRO2289Q9P1D8 64 aa2.04□□□□□ -2.08
CMSS1-207ENST00000494412 MYH2Q9UKX2 1941 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms