RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 FAM90A2PQ658T7 463 aa10.95□□□□□ -0.66
BRCA1-223ENST00000494123 GBGT1Q8N5D6 347 aa10.95□□□□□ -0.66
BRCA1-223ENST00000494123 STXBP6Q8NFX7 210 aa10.95□□□□□ -0.66
BRCA1-223ENST00000494123 GPR82Q96P67 336 aa10.95□□□□□ -0.66
BRCA1-223ENST00000494123 SPAG8Q99932 426 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-223ENST00000494123 SH3BGRL3Q9H299 93 aa10.95□□□□□ -0.66
BRCA1-223ENST00000494123 NBEAL1Q6ZS30 2694 aa10.95□□□□□ -0.66
BRCA1-223ENST00000494123 OR4C46A6NHA9 309 aa10.95□□□□□ -0.66
BRCA1-223ENST00000494123 SERF2P84101 59 aa10.95□□□□□ -0.66
BRCA1-223ENST00000494123 ACOT6Q3I5F7 207 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-223ENST00000494123 FAM78BQ5VT40 261 aa10.95□□□□□ -0.66
BRCA1-223ENST00000494123 GTSCR1Q86UQ5 136 aa10.95□□□□□ -0.66
BRCA1-223ENST00000494123 SLC25A32Q9H2D1 315 aa10.95□□□□□ -0.66
BRCA1-223ENST00000494123 SORL1Q92673 2214 aa10.94□□□□□ -0.66
BRCA1-223ENST00000494123 ZNF785A8K8V0 405 aa10.94□□□□□ -0.66
BRCA1-223ENST00000494123 RPL7P18124 248 aaKnown RBP10.94□□□□□ -0.66
BRCA1-223ENST00000494123 WFDC3Q8IUB2 231 aa10.94□□□□□ -0.66
BRCA1-223ENST00000494123 C9orf62Q8N4C0 152 aa10.94□□□□□ -0.66
BRCA1-223ENST00000494123 OR2G3Q8NGZ4 309 aa10.94□□□□□ -0.66
BRCA1-223ENST00000494123 PRR25Q96S07 402 aa10.94□□□□□ -0.66
BRCA1-223ENST00000494123 MS4A6AQ9H2W1 248 aa10.94□□□□□ -0.66
BRCA1-223ENST00000494123 MBP02144 154 aa10.93□□□□□ -0.66
BRCA1-223ENST00000494123 TPT1P13693 172 aaKnown RBP10.93□□□□□ -0.66
BRCA1-223ENST00000494123 ATF4P18848 351 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-223ENST00000494123 M6PRP20645 277 aa10.93□□□□□ -0.66
BRCA1-223ENST00000494123 NKX2-5P52952 324 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-223ENST00000494123 RHOBP62745 196 aa10.93□□□□□ -0.66
BRCA1-223ENST00000494123 MRPL32Q9BYC8 188 aaKnown RBP10.93□□□□□ -0.66
BRCA1-223ENST00000494123 SEPSECSQ9HD40 501 aaKnown RBP10.93□□□□□ -0.66
BRCA1-223ENST00000494123 NRN1Q9NPD7 142 aa10.93□□□□□ -0.66
BRCA1-223ENST00000494123 RAB2AP61019 212 aa10.92□□□□□ -0.66
BRCA1-223ENST00000494123 MORN5Q5VZ52 161 aa10.92□□□□□ -0.66
BRCA1-223ENST00000494123 BPIFA4PQ86YQ2 179 aa10.92□□□□□ -0.66
BRCA1-223ENST00000494123 OR10G4Q8NGN3 311 aa10.92□□□□□ -0.66
BRCA1-223ENST00000494123 OR10G9Q8NGN4 311 aa10.92□□□□□ -0.66
BRCA1-223ENST00000494123 OR10G7Q8NGN6 311 aa10.92□□□□□ -0.66
BRCA1-223ENST00000494123 FUT9Q9Y231 359 aa10.92□□□□□ -0.66
BRCA1-223ENST00000494123 TRAV5A0A0B4J249 113 aa10.91□□□□□ -0.66
BRCA1-223ENST00000494123 A0A1W2PPV4 95 aa10.91□□□□□ -0.66
BRCA1-223ENST00000494123 PRB2P02812 416 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-223ENST00000494123 CD81P60033 236 aa10.91□□□□□ -0.66
BRCA1-223ENST00000494123 SPATA31B1PQ5VZV4 182 aa10.91□□□□□ -0.66
BRCA1-223ENST00000494123 FAM122CQ6P4D5 195 aa10.91□□□□□ -0.66
BRCA1-223ENST00000494123 MIR17HGQ75NE6 70 aa10.91□□□□□ -0.66
BRCA1-223ENST00000494123 BAP18Q8IXM2 172 aa10.91□□□□□ -0.66
BRCA1-223ENST00000494123 TRAV2A0A0B4J234 112 aa10.91□□□□□ -0.66
BRCA1-223ENST00000494123 SPP1P10451 314 aa10.91□□□□□ -0.66
BRCA1-223ENST00000494123 TMEM41BQ5BJD5 291 aa10.91□□□□□ -0.66
BRCA1-223ENST00000494123 AKR1C8PQ5T2L2 129 aa10.91□□□□□ -0.66
BRCA1-223ENST00000494123 AURKAIP1Q9NWT8 199 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-223ENST00000494123 SEC11BP0C7V7 166 aa10.9□□□□□ -0.66
BRCA1-223ENST00000494123 MEOX2P50222 304 aa10.9□□□□□ -0.66
BRCA1-223ENST00000494123 TAS2R45P59539 299 aa10.9□□□□□ -0.66
BRCA1-223ENST00000494123 SLC51BQ86UW2 128 aa10.9□□□□□ -0.66
BRCA1-223ENST00000494123 STOML3Q8TAV4 291 aa10.9□□□□□ -0.66
BRCA1-223ENST00000494123 SMAD5-AS1Q9Y6J3 95 aa10.9□□□□□ -0.66
BRCA1-223ENST00000494123 K7EQG2 157 aa10.89□□□□□ -0.67
BRCA1-223ENST00000494123 CD7P09564 240 aa10.89□□□□□ -0.67
BRCA1-223ENST00000494123 CDC34P49427 236 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-223ENST00000494123 KHDC3LQ587J8 217 aa10.89□□□□□ -0.67
BRCA1-223ENST00000494123 EIF5AL1Q6IS14 154 aaKnown RBP10.89□□□□□ -0.67
BRCA1-223ENST00000494123 LRRC20Q8TCA0 184 aa10.89□□□□□ -0.67
BRCA1-223ENST00000494123 DCANP1Q8TF63 244 aa10.89□□□□□ -0.67
BRCA1-223ENST00000494123 SLC25A2Q9BXI2 301 aa10.89□□□□□ -0.67
BRCA1-223ENST00000494123 OR7C2O60412 319 aa10.88□□□□□ -0.67
BRCA1-223ENST00000494123 ID1P41134 155 aa10.88□□□□□ -0.67
BRCA1-223ENST00000494123 CMC4P56277 68 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-223ENST00000494123 SNRPD3P62318 126 aaKnown RBP10.88□□□□□ -0.67
BRCA1-223ENST00000494123 SAMD13Q5VXD3 122 aa10.88□□□□□ -0.67
BRCA1-223ENST00000494123 RPP25LQ8N5L8 163 aaKnown RBP10.88□□□□□ -0.67
BRCA1-223ENST00000494123 C16orf92Q96LL3 132 aa10.88□□□□□ -0.67
BRCA1-223ENST00000494123 ACTR3CQ9C0K3 210 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-223ENST00000494123 RPRMQ9NS64 109 aa10.88□□□□□ -0.67
BRCA1-223ENST00000494123 TMEM14CQ9P0S9 112 aa10.88□□□□□ -0.67
BRCA1-223ENST00000494123 UBQLN2Q9UHD9 624 aa10.88□□□□□ -0.67
BRCA1-223ENST00000494123 OR11H12B2RN74 326 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 BOLA2-SMG1P6H3BVE0 249 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 MRPS12O15235 138 aaKnown RBP10.87□□□□□ -0.67
BRCA1-223ENST00000494123 SNRPCP09234 159 aaKnown RBP10.87□□□□□ -0.67
BRCA1-223ENST00000494123 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 TMED6Q8WW62 240 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 PAXXQ9BUH6 204 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 OR51M1Q9H341 326 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 A0A087X0K7 114 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 EIF3GO75821 320 aaKnown RBP eCLIP10.87□□□□□ -0.67
BRCA1-223ENST00000494123 ZNF688P0C7X2 276 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 PYYP10082 97 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 DEFA6Q01524 100 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 LCN15Q6UWW0 184 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 FAM24BQ8N5W8 94 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 FAM167A-AS1Q96KT0 104 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 HRH4Q9H3N8 390 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 MAP6D1Q9H9H5 199 aa10.87□□□□□ -0.67
BRCA1-223ENST00000494123 UMAD1C9J7I0 102 aa10.86□□□□□ -0.67
BRCA1-223ENST00000494123 H3BTX0 84 aa10.86□□□□□ -0.67
BRCA1-223ENST00000494123 ISLRO14498 428 aa10.86□□□□□ -0.67
BRCA1-223ENST00000494123 HMGB3O15347 200 aaKnown RBP10.86□□□□□ -0.67
BRCA1-223ENST00000494123 OR10J4P0C629 311 aa10.86□□□□□ -0.67
BRCA1-223ENST00000494123 IGLC2P0DOY2 106 aa10.86□□□□□ -0.67
BRCA1-223ENST00000494123 PSMB3P49720 205 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms