RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 C8orf88P0DMB2 117 aa10.97□□□□□ -0.65
VCP-207ENST00000493886 UBE2L3P68036 154 aaKnown RBP10.97□□□□□ -0.65
VCP-207ENST00000493886 C19orf35Q6ZS72 473 aa10.97□□□□□ -0.65
VCP-207ENST00000493886 RCHY1Q96PM5 261 aa10.97□□□□□ -0.65
VCP-207ENST00000493886 HILPDAQ9Y5L2 63 aa10.97□□□□□ -0.65
VCP-207ENST00000493886 TRBV7-9A0A0J9YWB2 115 aa10.97□□□□□ -0.65
VCP-207ENST00000493886 TEX22C9J3V5 150 aa10.97□□□□□ -0.65
VCP-207ENST00000493886 C19orf84I3L1E1 186 aa10.96□□□□□ -0.65
VCP-207ENST00000493886 PLGLAQ15195 96 aa10.96□□□□□ -0.65
VCP-207ENST00000493886 OR5AU1Q8NGC0 362 aa10.96□□□□□ -0.65
VCP-207ENST00000493886 SELENOKQ9Y6D0 94 aa10.96□□□□□ -0.65
VCP-207ENST00000493886 ODF3BA8MYP8 253 aa10.96□□□□□ -0.66
VCP-207ENST00000493886 COX7A2P2O60397 106 aa10.96□□□□□ -0.66
VCP-207ENST00000493886 IBA57Q5T440 356 aaKnown RBP10.96□□□□□ -0.66
VCP-207ENST00000493886 RUSC1-AS1Q66K80 236 aa10.96□□□□□ -0.66
VCP-207ENST00000493886 NIT1Q86X76 327 aa10.96□□□□□ -0.66
VCP-207ENST00000493886 SRSF12Q8WXF0 261 aaKnown RBP10.96□□□□□ -0.66
VCP-207ENST00000493886 FAM168AQ92567 244 aa10.96□□□□□ -0.66
VCP-207ENST00000493886 DPF1Q92782 380 aa10.96□□□□□ -0.66
VCP-207ENST00000493886 C20orf144Q9BQM9 153 aa10.96□□□□□ -0.66
VCP-207ENST00000493886 PAX2Q02962 417 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 OR1L4Q8NGR5 311 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 FAM167A-AS1Q96KT0 104 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 FBXL7Q9UJT9 491 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 LAMTOR2Q9Y2Q5 125 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 IGHV3-21A0A0B4J1V1 117 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 A0A1W2PRD5 423 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 A0A1W2PRF3 423 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 A0A1W2PRM7 423 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 GAGE12BA1L429 117 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 SRIP30626 198 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 AMTP48728 403 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 CFHR4Q92496 578 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 SLC25A2Q9BXI2 301 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 F11RQ9Y624 299 aaKnown RBP10.95□□□□□ -0.66
VCP-207ENST00000493886 SVEP1Q4LDE5 3571 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 C10orf113Q5VZT2 155 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 PATE2Q6UY27 113 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 FAM19A2Q8N3H0 131 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 IGFBPL1Q8WX77 278 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 TNFRSF19Q9NS68 423 aa10.95□□□□□ -0.66
VCP-207ENST00000493886 MOSP00540 346 aa10.94□□□□□ -0.66
VCP-207ENST00000493886 IGLV2-8P01709 118 aa10.94□□□□□ -0.66
VCP-207ENST00000493886 ZFP36P26651 326 aaKnown RBP10.94□□□□□ -0.66
VCP-207ENST00000493886 SIGLECL1Q8N7X8 197 aa10.94□□□□□ -0.66
VCP-207ENST00000493886 PKD1L2Q7Z442 2459 aa10.94□□□□□ -0.66
VCP-207ENST00000493886 MED13LQ71F56 2210 aa10.94□□□□□ -0.66
VCP-207ENST00000493886 PRB4P10163 310 aaPredicted RBP10.94□□□□□ -0.66
VCP-207ENST00000493886 NTF3P20783 257 aa10.94□□□□□ -0.66
VCP-207ENST00000493886 EFNA4P52798 201 aa10.94□□□□□ -0.66
VCP-207ENST00000493886 GNG5P63218 68 aa10.94□□□□□ -0.66
VCP-207ENST00000493886 VMO1Q7Z5L0 202 aa10.94□□□□□ -0.66
VCP-207ENST00000493886 TMEM116Q8NCL8 245 aa10.94□□□□□ -0.66
VCP-207ENST00000493886 ZNF355PQ9NSJ1 428 aa10.94□□□□□ -0.66
VCP-207ENST00000493886 ASH1LQ9NR48 2969 aaKnown RBP10.93□□□□□ -0.66
VCP-207ENST00000493886 CACNA1AO00555 2505 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 H3BTX0 84 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 ZNF253O75346 499 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 RANP62826 216 aaKnown RBP10.93□□□□□ -0.66
VCP-207ENST00000493886 TMEM136Q6ZRR5 245 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 KIR3DL3Q8N743 410 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 TRGV9Q99603 122 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 VAMP8Q9BV40 100 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 TNFRSF18Q9Y5U5 241 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 A0A1W2PRE2 83 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 NBR2O15453 112 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 CD24P25063 80 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 ARL3P36405 182 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 CX3CL1P78423 397 aa10.93□□□□□ -0.66
VCP-207ENST00000493886 PAFAH1B2P68402 229 aa10.92□□□□□ -0.66
VCP-207ENST00000493886 BLNKQ8WV28 456 aa10.92□□□□□ -0.66
VCP-207ENST00000493886 GATA3P23771 443 aa10.92□□□□□ -0.66
VCP-207ENST00000493886 ATOH7Q8N100 152 aa10.92□□□□□ -0.66
VCP-207ENST00000493886 NPBQ8NG41 125 aa10.92□□□□□ -0.66
VCP-207ENST00000493886 SRSF8Q9BRL6 282 aaKnown RBP10.92□□□□□ -0.66
VCP-207ENST00000493886 CACNA1BQ00975 2339 aa10.92□□□□□ -0.66
VCP-207ENST00000493886 BMPR1BO00238 502 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 NDUFA3O95167 84 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 HES1Q14469 280 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 TMEM183BQ1AE95 376 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 Q6ZN92 141 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 IGF2BP2-AS1Q96M15 143 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 PAXXQ9BUH6 204 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 GNB1LQ9BYB4 327 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 LY96Q9Y6Y9 160 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 HOXB4P17483 251 aaPredicted RBP10.91□□□□□ -0.66
VCP-207ENST00000493886 ORM2P19652 201 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 LINC00305Q7Z4B0 112 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 SSBP4Q9BWG4 385 aaPredicted RBP10.91□□□□□ -0.66
VCP-207ENST00000493886 WNT10AQ9GZT5 417 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 CDC42EP3Q9UKI2 254 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 TRAV9-1A0A075B6T8 112 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 TMEM8BA6NDV4 472 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 DIRC3C9JPN6 131 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 G3V4G9 280 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 TEX43Q6ZNM6 134 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 SMIM20Q8N5G0 67 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 OR1B1Q8NGR6 318 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 ZC2HC1AQ96GY0 325 aa10.91□□□□□ -0.66
VCP-207ENST00000493886 FAM110AQ9BQ89 295 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms