RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 LAMB1P07942 1786 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 CFPP27918 469 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 HLA-DMBP28068 263 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 DEFB131AP59861 70 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 ETDBQ3ZM63 59 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 ZNF672Q499Z4 452 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-221ENST00000493795 C3orf56Q8N813 242 aa6.41□□□□□ -1.38
BRCA1-221ENST00000493795 SP7Q8TDD2 431 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-221ENST00000493795 RNASE2P10153 161 aaKnown RBP6.4□□□□□ -1.38
BRCA1-221ENST00000493795 HERVK_113P63121 156 aa6.4□□□□□ -1.38
BRCA1-221ENST00000493795 Q0VG73 95 aa6.4□□□□□ -1.38
BRCA1-221ENST00000493795 PDE6HQ13956 83 aa6.4□□□□□ -1.38
BRCA1-221ENST00000493795 PYY3Q5JQD4 70 aa6.4□□□□□ -1.38
BRCA1-221ENST00000493795 CEND1Q8N111 149 aa6.4□□□□□ -1.38
BRCA1-221ENST00000493795 H0YJW9 148 aa6.4□□□□□ -1.38
BRCA1-221ENST00000493795 ACYP1P07311 99 aa6.4□□□□□ -1.38
BRCA1-221ENST00000493795 FAM104BQ5XKR9 115 aa6.4□□□□□ -1.38
BRCA1-221ENST00000493795 MRPL14Q6P1L8 145 aaKnown RBP6.4□□□□□ -1.38
BRCA1-221ENST00000493795 C20orf204Q6ZNR8 217 aa6.4□□□□□ -1.38
BRCA1-221ENST00000493795 DEFB105AQ8NG35 78 aa6.4□□□□□ -1.38
BRCA1-221ENST00000493795 ZNF837Q96EG3 531 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-221ENST00000493795 C20orf144Q9BQM9 153 aa6.4□□□□□ -1.38
BRCA1-221ENST00000493795 ZNF492Q9P255 531 aa6.4□□□□□ -1.38
BRCA1-221ENST00000493795 E9PLN8 166 aa6.4□□□□□ -1.39
BRCA1-221ENST00000493795 DDX60LQ5H9U9 1706 aaKnown RBP6.4□□□□□ -1.39
BRCA1-221ENST00000493795 LAIR2Q6ISS4 152 aa6.4□□□□□ -1.39
BRCA1-221ENST00000493795 SS18L2Q9UHA2 77 aa6.4□□□□□ -1.39
BRCA1-221ENST00000493795 IGHV3-16A0A0C4DH30 117 aa6.4□□□□□ -1.39
BRCA1-221ENST00000493795 POLR3KQ9Y2Y1 108 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-221ENST00000493795 RREB1Q92766 1687 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 A0A1W2PPM0 123 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 IGKV1-5P01602 117 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 ZNF883P0CG24 379 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 HLA-DRB4P13762 266 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 APOC4P55056 127 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 BVES-AS1Q5T3Y7 98 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 BOD1L2Q8IYS8 172 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 SHANK2-AS3Q9BTD1 123 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 C14orf132Q9NPU4 83 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 HLA-DRB4X5D2U9 266 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 TMEM14EPQ6UXP3 125 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 SRSF8Q9BRL6 282 aaKnown RBP6.39□□□□□ -1.39
BRCA1-221ENST00000493795 A0A1B0GX51 115 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 PRB2P02812 416 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-221ENST00000493795 PRB1P04280 392 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 PFN1P07737 140 aaKnown RBP6.39□□□□□ -1.39
BRCA1-221ENST00000493795 LINC00114Q6XXX2 140 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 ZCCHC24Q8N2G6 241 aaKnown RBP6.39□□□□□ -1.39
BRCA1-221ENST00000493795 CYTL1Q9NRR1 136 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 PSPNO60542 156 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 RPP25LQ8N5L8 163 aaKnown RBP6.39□□□□□ -1.39
BRCA1-221ENST00000493795 XCL2Q9UBD3 114 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 NUP205Q92621 2012 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 A0A0A6YYD4 124 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 IGKV1-9A0A0C4DH69 117 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 E9PQ18 207 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 BUB1B-PAK6H3BSN5 160 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 NMSQ5H8A3 153 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 ZNRF2Q8NHG8 242 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 SPATA25Q9BR10 227 aa6.39□□□□□ -1.39
BRCA1-221ENST00000493795 MYH14Q7Z406 1995 aaKnown RBP6.38□□□□□ -1.39
BRCA1-221ENST00000493795 FNDC10F2Z333 226 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 LINC01619G3V211 115 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 HGFACQ04756 655 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 FOXF2Q12947 444 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 TMEM213A2RRL7 107 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 OVOL3O00110 214 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 RS1O15537 224 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 EVPLQ92817 2033 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 IGHV1OR15-1A0A075B7D0 117 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 SRRM5B3KS81 715 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 J3KT08 172 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 NTN3O00634 580 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-221ENST00000493795 IGLC2P0DOY2 106 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 IGLC3P0DOY3 106 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 PRSS57Q6UWY2 283 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 TRAV3A0A0B4J244 114 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 SDHAF1A6NFY7 115 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 TMEM178BH3BS89 294 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 BAALC-AS2P0C853 105 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 PAX9P55771 341 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 BRD3OSQ6XYD6 125 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 KLK9Q9UKQ9 250 aa6.38□□□□□ -1.39
BRCA1-221ENST00000493795 MYO9BQ13459 2157 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 COX8AP10176 69 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 NTF4P34130 210 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 NTN5Q8WTR8 489 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-221ENST00000493795 CFHR4Q92496 578 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 SIGLEC9Q9Y336 463 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 IGKV1D-8A0A087WSZ0 117 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 B5MCH6 92 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 CFHR2P36980 270 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 LGALS9BQ3B8N2 356 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 LGALS9CQ6DKI2 356 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 LINC01356Q8N9X3 169 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 HS3ST6Q96QI5 342 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 NINQ8N4C6 2090 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 ETDCA0A1B0GVM5 59 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 IGHV3-38A0A0C4DH36 116 aa6.37□□□□□ -1.39
BRCA1-221ENST00000493795 C8orf49Q96NF6 230 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms