RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 ZNF493Q6ZR52 646 aa6.78□□□□□ -1.32
TNFRSF9-203ENST00000492571 TMEM144Q7Z5S9 345 aa6.78□□□□□ -1.32
TNFRSF9-203ENST00000492571 LHFPL1Q86WI0 220 aa6.78□□□□□ -1.32
TNFRSF9-203ENST00000492571 LGI3Q8N145 548 aa6.78□□□□□ -1.32
TNFRSF9-203ENST00000492571 LYPD1Q8N2G4 141 aa6.78□□□□□ -1.32
TNFRSF9-203ENST00000492571 ZNF503Q96F45 646 aa6.78□□□□□ -1.32
TNFRSF9-203ENST00000492571 GPR82Q96P67 336 aa6.78□□□□□ -1.32
TNFRSF9-203ENST00000492571 UHRF2Q96PU4 802 aa6.78□□□□□ -1.32
TNFRSF9-203ENST00000492571 RSG1Q9BU20 258 aa6.78□□□□□ -1.32
TNFRSF9-203ENST00000492571 SLC25A22Q9H936 323 aa6.78□□□□□ -1.32
TNFRSF9-203ENST00000492571 TRAV26-1A0A087WT03 109 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 NXPH3O95157 252 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 CD3DP04234 171 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 PRM2P04554 102 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 OR5AC1P0C628 307 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 SULT1A3P0DMM9 295 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 SULT1A4P0DMN0 295 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 ERVFC1-1P60608 527 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 RAB11AP62491 216 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 ZNF90Q03938 601 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 RNASE12Q5GAN4 147 aaKnown RBP6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 NMSQ5H8A3 153 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 Q5VSD8 79 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 TMEM268Q5VZI3 342 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 CCDC28AQ8IWP9 274 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 OR11H7Q8NGC8 314 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 OR1B1Q8NGR6 318 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 OR13C8Q8NGS7 320 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 RXFP4Q8TDU9 374 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 C15orf40Q8WUR7 153 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 UPK3BQ9BT76 320 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 KCNIP3Q9Y2W7 256 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 NACAE9PAV3 2078 aa6.77□□□□□ -1.33
TNFRSF9-203ENST00000492571 FAM25AB3EWG3 89 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 FAM25CB3EWG5 89 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 FAM25GB3EWG6 89 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 BOLA2-SMG1P6H3BVE0 249 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 AZU1P20160 251 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 LSM3P62310 102 aaKnown RBP6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 FGL1Q08830 312 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 OR2F1Q13607 317 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 AMTNQ6UX39 209 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 BAP18Q8IXM2 172 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 SELENOHQ8IZQ5 122 aaKnown RBP6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 OR4D5Q8NGN0 318 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 LRRC20Q8TCA0 184 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 MARCH1Q8TCQ1 289 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 DTD1Q8TEA8 209 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 GLYATL2Q8WU03 294 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 NAA60Q9H7X0 242 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 VCX3AQ9NNX9 186 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 NOP10Q9NPE3 64 aaKnown RBP6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 ZNF586Q9NXT0 402 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 SLC45A2Q9UMX9 530 aa6.76□□□□□ -1.33
TNFRSF9-203ENST00000492571 TRAV12-2A0A075B6T6 113 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 PIGBOS1A0A0B4J2F0 54 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 A0A0J9YY99 117 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 A8MTW9 85 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 CRXO43186 299 aaPredicted RBP6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 RAB3DO95716 219 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 TAS2R19P59542 299 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 MEF2DQ14814 521 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 GPR107Q5VW38 600 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 MZT2AQ6P582 158 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 S100A7AQ86SG5 101 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 ZNF738Q8NE65 137 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 TMEM170AQ8WVE7 144 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 C18orf15Q96N68 181 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 TRGV9Q99603 122 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 TMEM147Q9BVK8 224 aa6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 SLC25A39Q9BZJ4 359 aaPredicted RBP6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 PAIP2BQ9ULR5 123 aaKnown RBP6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 MRPS16Q9Y3D3 137 aaKnown RBP6.75□□□□□ -1.33
TNFRSF9-203ENST00000492571 ZNF98A6NK75 572 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 H3BNG1 76 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 H7BYZ3 331 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 RLN2P04090 185 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 AKR1C4P17516 323 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 ELK1P19419 428 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 ORM2P19652 201 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 TGFBR1P36897 503 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 CCR6P51684 374 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 LINC00315P59091 139 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 RPP30P78346 268 aaKnown RBP6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 HIST1H1AQ02539 215 aaPredicted RBP6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 SURF2Q15527 256 aaPredicted RBP6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 ESRGQ1W209 222 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 NFE4Q86UQ8 179 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 BPIFCQ8NFQ6 507 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 TMEM263Q8WUH6 116 aaKnown RBP6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 IL22RA2Q969J5 263 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 KRTAP1-5Q9BYS1 174 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 SLC25A32Q9H2D1 315 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 MTFP1Q9UDX5 166 aa6.74□□□□□ -1.33
TNFRSF9-203ENST00000492571 TRAV9-2A0A087WT02 112 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 PLAC8L1A1L4L8 177 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 SNURFLB1AK76 121 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 DISC1C4P0D8 188 aa6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 ZNF701M0R085 212 aaPredicted RBP6.73□□□□□ -1.33
TNFRSF9-203ENST00000492571 SIVA1O15304 175 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms