RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 APELAP0DMC3 54 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 IGLC2P0DOY2 106 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 S100A2P29034 98 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 S100A7P31151 101 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 CT83Q5H943 113 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 WDR73Q6P4I2 378 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 BPIFA4PQ86YQ2 179 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 PIP4P2Q8N4L2 257 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 WFDC11Q8NEX6 87 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 WIPF2Q8TF74 440 aaPredicted RBP8.42□□□□□ -1.06
USP4-214ENST00000491791 FAM168AQ92567 244 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 GPR82Q96P67 336 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 C21orf62Q9NYP8 219 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 TRAPPC1Q9Y5R8 145 aa8.42□□□□□ -1.06
USP4-214ENST00000491791 JMJD1CQ15652 2540 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 TRBV19A0A075B6N1 114 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 IGHV1-69DA0A0B4J2H0 117 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 PGPA6NDG6 321 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 NCBP2LA6PVI3 153 aaKnown RBP8.41□□□□□ -1.06
USP4-214ENST00000491791 NDUFB8O95169 186 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 IGHV1-69P01742 117 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 ESDP10768 282 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 CD24P25063 80 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 LYZP61626 148 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 RANP62826 216 aaKnown RBP8.41□□□□□ -1.06
USP4-214ENST00000491791 OR5I1Q13606 314 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 C19orf54Q5BKX5 351 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 IBA57Q5T440 356 aaKnown RBP8.41□□□□□ -1.06
USP4-214ENST00000491791 PACRGQ96M98 296 aaPredicted RBP8.41□□□□□ -1.06
USP4-214ENST00000491791 CCL19Q99731 98 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 GPR61Q9BZJ8 451 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 PRSS22Q9GZN4 317 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 Q9H3A6 140 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 ZNF586Q9NXT0 402 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 ARHGAP32A7KAX9 2087 aa8.41□□□□□ -1.06
USP4-214ENST00000491791 IGHV3-21A0A0B4J1V1 117 aa8.4□□□□□ -1.06
USP4-214ENST00000491791 XKRY2A2RUG3 117 aa8.4□□□□□ -1.06
USP4-214ENST00000491791 FAM231BA6NCW3 169 aa8.4□□□□□ -1.06
USP4-214ENST00000491791 FBLL1A6NHQ2 334 aaKnown RBP8.4□□□□□ -1.06
USP4-214ENST00000491791 SLC17A3O00476 420 aa8.4□□□□□ -1.06
USP4-214ENST00000491791 ZNF253O75346 499 aa8.4□□□□□ -1.06
USP4-214ENST00000491791 SLC25A5P05141 298 aaKnown RBP8.4□□□□□ -1.06
USP4-214ENST00000491791 CTSGP08311 255 aa8.4□□□□□ -1.06
USP4-214ENST00000491791 FAM120AOSQ5T036 256 aa8.4□□□□□ -1.06
USP4-214ENST00000491791 C16orf54Q6UWD8 224 aa8.4□□□□□ -1.06
USP4-214ENST00000491791 Q71RC1 249 aaPredicted RBP8.4□□□□□ -1.06
USP4-214ENST00000491791 GRAMD2BQ96HH9 432 aa8.4□□□□□ -1.06
USP4-214ENST00000491791 HIST1H2BLQ99880 126 aa8.4□□□□□ -1.06
USP4-214ENST00000491791 FAM103A1Q9BTL3 118 aaKnown RBP8.4□□□□□ -1.06
USP4-214ENST00000491791 VPS13CQ709C8 3753 aa8.4□□□□□ -1.07
USP4-214ENST00000491791 IGHV4-61A0A0C4DH41 118 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 SERTM2A0A1B0GWG4 89 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 C19orf71A6NCJ1 209 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 IZUMO1RA6ND01 250 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 NPIPB6E9PJ23 425 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 GNG7O60262 68 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 HNF1AP20823 631 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 GATA3P23771 443 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 RAB9AP51151 201 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 UBE2G1P62253 170 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 Q0VG73 95 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 KLF17Q5JT82 389 aaPredicted RBP8.39□□□□□ -1.07
USP4-214ENST00000491791 GFI1BQ5VTD9 330 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 CLEC2AQ6UVW9 174 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 SIGLEC15Q6ZMC9 328 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 COX8CQ7Z4L0 72 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 C5orf56Q8N8D9 126 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 NUDT10Q8NFP7 164 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 OR4F17Q8NGA8 305 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 ZNF502Q8TBZ5 544 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 PIFOQ8TCI5 191 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 NUDT11Q96G61 164 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 ZNF414Q96IQ9 312 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 LINC00479Q96M42 142 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 GFRA4Q9GZZ7 299 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 RNASE7Q9H1E1 156 aaKnown RBP8.39□□□□□ -1.07
USP4-214ENST00000491791 ZNF580Q9UK33 172 aa8.39□□□□□ -1.07
USP4-214ENST00000491791 GATCO43716 136 aaKnown RBP8.38□□□□□ -1.07
USP4-214ENST00000491791 IGLV2-11P01706 119 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 IL4P05112 153 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 CLEC12BQ2HXU8 276 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 PYY3Q5JQD4 70 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 ATP5L2Q7Z4Y8 100 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 OR8I2Q8N0Y5 310 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 LRRC75A-AS1Q8N1F1 130 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 TMEM75Q8N9X5 138 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 TSKUQ8WUA8 353 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 BLNKQ8WV28 456 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 SMR3AQ99954 134 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 HSPB9Q9BQS6 159 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 FBXL7Q9UJT9 491 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 ZFP30Q9Y2G7 519 aa8.38□□□□□ -1.07
USP4-214ENST00000491791 SOX21Q9Y651 276 aaPredicted RBP8.38□□□□□ -1.07
USP4-214ENST00000491791 FBN3Q75N90 2809 aa8.37□□□□□ -1.07
USP4-214ENST00000491791 HIVEP2P31629 2446 aa8.37□□□□□ -1.07
USP4-214ENST00000491791 HLA-DQA1P01909 254 aa8.37□□□□□ -1.07
USP4-214ENST00000491791 AMBPP02760 352 aa8.37□□□□□ -1.07
USP4-214ENST00000491791 AMY1AP04745 511 aa8.37□□□□□ -1.07
USP4-214ENST00000491791 RPL7P18124 248 aaKnown RBP8.37□□□□□ -1.07
USP4-214ENST00000491791 ADMP35318 185 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms