RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 ISLRO14498 428 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 GNG7O60262 68 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 IGKV1-17P01599 117 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 TRGC2P03986 189 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 APELAP0DMC3 54 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 HIST1H1EP10412 219 aaKnown RBP9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 ASPHD1Q5U4P2 390 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 MORN5Q5VZ52 161 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 ZNF329Q86UD4 541 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 LINC00518Q8N0U6 118 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 ARL6IP6Q8N6S5 226 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 OR5T1Q8NG75 326 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 FANCD2OSQ96PS1 177 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 ZNF747Q9BV97 191 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 IL36BQ9NZH7 164 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 KLF12Q9Y4X4 402 aa9.37□□□□□ -0.91
SRGAP3-210ENST00000491467 PEX7O00628 323 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 PYYP10082 97 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 CD24P25063 80 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 LYZP61626 148 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 FABP9Q0Z7S8 132 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 TMEM183BQ1AE95 376 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 CENPWQ5EE01 88 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 FAM231DQ6ZW35 169 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 BPIFA4PQ86YQ2 179 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 C5orf17Q8NAS9 161 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 SHANK2-AS3Q9BTD1 123 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 SLC25A39Q9BZJ4 359 aaPredicted RBP9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 OTORQ9NRC9 128 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 C21orf62Q9NYP8 219 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 EPDR1Q9UM22 224 aa9.36□□□□□ -0.91
SRGAP3-210ENST00000491467 HYDINQ4G0P3 5121 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 TRAV20A0A0B4J274 112 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 IGHV4-61A0A0C4DH41 118 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 A0A1W2PPQ1 181 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 PGPA6NDG6 321 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 B4DSR2 109 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 H3BRN7 92 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 HIST1H2BKO60814 126 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 HIST1H2BJP06899 126 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 IGHV4-31P0DP07 118 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 EGR2P11161 476 aaPredicted RBP9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 GP9P14770 177 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 HIST1H2BOP23527 126 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 HIST1H2BBP33778 126 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 CDX1P47902 265 aaPredicted RBP9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 AKR1D1P51857 326 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 CRIP2P52943 208 aaPredicted RBP9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 HIST1H2BDP58876 126 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 HIST1H2BCP62807 126 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 HIST2H2BEQ16778 126 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 RPEL1Q2QD12 228 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 ZNF491Q8N8L2 437 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 HIST1H2BHQ93079 126 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 IGF2BP2-AS1Q96M15 143 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 HIST1H2BNQ99877 126 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 HIST1H2BMQ99879 126 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 PITPNC1Q9UKF7 332 aa9.35□□□□□ -0.91
SRGAP3-210ENST00000491467 IGHV4-30-2A0A087WSY4 118 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 TRBV9A0A0B4J1U6 114 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 IGHV3-21A0A0B4J1V1 117 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 TRBV6-1A0A0K0K1D8 114 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 K7EN84 100 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 M0QZK8 103 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 PHOX2AO14813 284 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 SLC25A5P05141 298 aaKnown RBP9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 MSMBP08118 114 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 TRGC1P0CF51 173 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 RAB9AP51151 201 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 NDUFA6P56556 154 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 ERVFC1-1P60608 527 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 RUSC1-AS1Q66K80 236 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 ZNF600Q6ZNG1 722 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 NECAP1Q8NC96 275 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 OR4F17Q8NGA8 305 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 FRZBQ92765 325 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 RNF125Q96EQ8 232 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 FMC1Q96HJ9 113 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 ATG101Q9BSB4 218 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 FAM103A1Q9BTL3 118 aaKnown RBP9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 MOB4Q9Y3A3 225 aa9.34□□□□□ -0.91
SRGAP3-210ENST00000491467 A0A0U1RQK1 487 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 ZNF320A2RRD8 509 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 PGPEP1LA6NFU8 196 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 NDUFB8O95169 186 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 BRI3O95415 125 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 IGLV2-8P01709 118 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 UBE2G1P62253 170 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 RANP62826 216 aaKnown RBP9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 LOXL1Q08397 574 aaPredicted RBP9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 PDE6HQ13956 83 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 Q56UQ5 140 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 UNQ5815/PRO19632Q6UWF5 114 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 C19orf35Q6ZS72 473 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 BAGE2Q86Y30 109 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 PIP4P2Q8N4L2 257 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 FBXL7Q9UJT9 491 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 V9GYV3 84 aa9.33□□□□□ -0.92
SRGAP3-210ENST00000491467 A0A096LNT2 108 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms