RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 PRDM13Q9H4Q3 707 aa10.75□□□□□ -0.69
SMPD4-219ENST00000491128 GP9P14770 177 aa10.75□□□□□ -0.69
SMPD4-219ENST00000491128 UNQ9165/PRO28630Q6UXU0 137 aa10.75□□□□□ -0.69
SMPD4-219ENST00000491128 OR4X2Q8NGF9 303 aa10.75□□□□□ -0.69
SMPD4-219ENST00000491128 NIPSNAP3BQ9BS92 247 aa10.75□□□□□ -0.69
SMPD4-219ENST00000491128 SNAPINO95295 136 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 ARL3P36405 182 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 IGFL4Q6B9Z1 124 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 ISOC2Q96AB3 205 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 SMDT1Q9H4I9 107 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 TMEM167BQ9NRX6 74 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 NSD1Q96L73 2696 aaPredicted RBP10.74□□□□□ -0.69
SMPD4-219ENST00000491128 TRBV7-1A0A0A6YYK4 115 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 C7orf77A4D0Y5 90 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 NBEAP1P0C6P0 100 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 PMS2P11Q13670 270 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 C18orf65Q6ZTR6 163 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 EXOC3-AS1Q8N2X6 119 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 RNF2Q99496 336 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 SHANK2-AS3Q9BTD1 123 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 ELOVL1Q9BW60 279 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 ZNF586Q9NXT0 402 aa10.74□□□□□ -0.69
SMPD4-219ENST00000491128 TRBV20OR9-2A0A075B6H5 130 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 FAM223BA6NKX1 122 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 H3BRN7 92 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 FABP1P07148 127 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 EDN2P20800 178 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 FAM223AQ8IWN6 122 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 ASCL2Q99929 193 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 ZFAND3Q9H8U3 227 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 JMJD1CQ15652 2540 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 TRAV34A0A0B4J273 112 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 ZNF320A2RRD8 509 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 INAFM1C9JVW0 142 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 SLC17A3O00476 420 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 PSMB8P28062 276 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 ADIRFQ15847 76 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 TXN2Q99757 166 aa10.73□□□□□ -0.69
SMPD4-219ENST00000491128 CLPSL1A2RUU4 121 aa10.72□□□□□ -0.69
SMPD4-219ENST00000491128 SERTAD4Q9NUC0 356 aa10.72□□□□□ -0.69
SMPD4-219ENST00000491128 TEP1Q99973 2627 aaKnown RBP10.72□□□□□ -0.69
SMPD4-219ENST00000491128 PGPA6NDG6 321 aa10.72□□□□□ -0.69
SMPD4-219ENST00000491128 IGHG4P01861 327 aa10.72□□□□□ -0.69
SMPD4-219ENST00000491128 SRD5A1P18405 259 aa10.72□□□□□ -0.69
SMPD4-219ENST00000491128 TAGLN2P37802 199 aaKnown RBP10.72□□□□□ -0.69
SMPD4-219ENST00000491128 KLK9Q2XQG4 91 aa10.72□□□□□ -0.69
SMPD4-219ENST00000491128 NHLRC2Q8NBF2 726 aa10.72□□□□□ -0.69
SMPD4-219ENST00000491128 GSN-AS1Q9NRJ2 163 aa10.72□□□□□ -0.69
SMPD4-219ENST00000491128 KLK9Q9UKQ9 250 aa10.72□□□□□ -0.69
SMPD4-219ENST00000491128 Q6ZSV7 163 aa10.72□□□□□ -0.69
SMPD4-219ENST00000491128 TVP23CQ96ET8 276 aa10.72□□□□□ -0.69
SMPD4-219ENST00000491128 RABAC1Q9UI14 185 aa10.72□□□□□ -0.69
SMPD4-219ENST00000491128 TMEM250H0YL14 139 aa10.71□□□□□ -0.69
SMPD4-219ENST00000491128 BMPR1BO00238 502 aa10.71□□□□□ -0.69
SMPD4-219ENST00000491128 PDE6DO43924 150 aa10.71□□□□□ -0.69
SMPD4-219ENST00000491128 SNRPEP62304 92 aaKnown RBP10.71□□□□□ -0.69
SMPD4-219ENST00000491128 DEFB136Q30KP8 78 aa10.71□□□□□ -0.69
SMPD4-219ENST00000491128 ZNF343Q6P1L6 599 aa10.71□□□□□ -0.69
SMPD4-219ENST00000491128 OR8I2Q8N0Y5 310 aa10.71□□□□□ -0.69
SMPD4-219ENST00000491128 DUX3Q96PT4 197 aa10.71□□□□□ -0.69
SMPD4-219ENST00000491128 F8P00451 2351 aa10.71□□□□□ -0.69
SMPD4-219ENST00000491128 CYSRT1A8MQ03 144 aa10.71□□□□□ -0.7
SMPD4-219ENST00000491128 KHDC1LQ5JSQ8 128 aa10.71□□□□□ -0.7
SMPD4-219ENST00000491128 SDF2L1Q9HCN8 221 aa10.71□□□□□ -0.7
SMPD4-219ENST00000491128 URGCP-MRPS24S4R325 110 aa10.71□□□□□ -0.7
SMPD4-219ENST00000491128 COLCA2A8K830 154 aa10.7□□□□□ -0.7
SMPD4-219ENST00000491128 TMEM241Q24JQ0 296 aa10.7□□□□□ -0.7
SMPD4-219ENST00000491128 BPIFA4PQ86YQ2 179 aa10.7□□□□□ -0.7
SMPD4-219ENST00000491128 Q9H3A6 140 aa10.7□□□□□ -0.7
SMPD4-219ENST00000491128 IGKV3-7A0A075B6H7 116 aa10.7□□□□□ -0.7
SMPD4-219ENST00000491128 SLC25A5P05141 298 aaKnown RBP10.7□□□□□ -0.7
SMPD4-219ENST00000491128 RPL23P62829 140 aaKnown RBP10.7□□□□□ -0.7
SMPD4-219ENST00000491128 TEX38Q6PEX7 206 aa10.7□□□□□ -0.7
SMPD4-219ENST00000491128 USMG5Q96IX5 58 aa10.7□□□□□ -0.7
SMPD4-219ENST00000491128 SMAD5-AS1Q9Y6J3 95 aa10.7□□□□□ -0.7
SMPD4-219ENST00000491128 WNK1Q9H4A3 2382 aa10.69□□□□□ -0.7
SMPD4-219ENST00000491128 A0A1W2PRE2 83 aa10.69□□□□□ -0.7
SMPD4-219ENST00000491128 M0R3E3 92 aa10.69□□□□□ -0.7
SMPD4-219ENST00000491128 HAX1O00165 279 aa10.69□□□□□ -0.7
SMPD4-219ENST00000491128 MRPS12O15235 138 aaKnown RBP10.69□□□□□ -0.7
SMPD4-219ENST00000491128 SCGB2A1O75556 95 aa10.69□□□□□ -0.7
SMPD4-219ENST00000491128 SMIM6P0DI80 62 aa10.69□□□□□ -0.7
SMPD4-219ENST00000491128 HLA-DMBP28068 263 aa10.69□□□□□ -0.7
SMPD4-219ENST00000491128 TM4SF20Q53R12 229 aa10.69□□□□□ -0.7
SMPD4-219ENST00000491128 KLHDC1Q8N7A1 406 aa10.69□□□□□ -0.7
SMPD4-219ENST00000491128 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.69□□□□□ -0.7
SMPD4-219ENST00000491128 TRAV8-1A0A0A6YYK1 113 aa10.69□□□□□ -0.7
SMPD4-219ENST00000491128 CD99P14209 185 aa10.69□□□□□ -0.7
SMPD4-219ENST00000491128 C5orf52A6NGY3 159 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 IGLC2P0DOY2 106 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 HIST1H1EP10412 219 aaKnown RBP10.68□□□□□ -0.7
SMPD4-219ENST00000491128 FOLR2P14207 255 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 OR5I1Q13606 314 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 TCTEX1D4Q5JR98 221 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 STXBP6Q8NFX7 210 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 OR4F17Q8NGA8 305 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 OCC1Q8TAD7 63 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 NAT8Q9UHE5 227 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 A0A0G2JLM5 398 aa10.68□□□□□ -0.7
SMPD4-219ENST00000491128 HELTA6NFD8 242 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms