RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 F11RQ9Y624 299 aaKnown RBP4.64□□□□□ -1.67
VPS41-214ENST00000490924 DSCAML1Q8TD84 2053 aa4.64□□□□□ -1.67
VPS41-214ENST00000490924 MAP1BP46821 2468 aaKnown RBP4.64□□□□□ -1.67
VPS41-214ENST00000490924 MAST4O15021 2626 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 FLNBO75369 2602 aaKnown RBP4.63□□□□□ -1.67
VPS41-214ENST00000490924 GCN1Q92616 2671 aaKnown RBP4.63□□□□□ -1.67
VPS41-214ENST00000490924 ZFYVE26Q68DK2 2539 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 TRAV30A0A087WSZ9 112 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 A0A1B0GUT8 65 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 A0A1W2PPI3 338 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 SHISA9B4DS77 424 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 HSBP1L1C9JCN9 74 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 C16orf97H3BN30 126 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 K7EM74 188 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 NKX2-8O15522 239 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 SCGB2A1O75556 95 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 IGLV1-47P01700 117 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 APOHP02749 345 aaPredicted RBP4.63□□□□□ -1.67
VPS41-214ENST00000490924 TFF1P04155 84 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 SLC25A5P05141 298 aaKnown RBP4.63□□□□□ -1.67
VPS41-214ENST00000490924 NPSP0C0P6 89 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 FTH1P19P0C7X4 201 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 CEACAM3P40198 252 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 CSN1S1P47710 185 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 SEC11AP67812 179 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 RIGQ13278 110 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 PLGLAQ15195 96 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 ADIPOQQ15848 244 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 MRGPRG-AS1Q2M3A8 158 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 FAM120AOSQ5T036 256 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 ATP1A1-AS1Q5TC04 95 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 LINC01545Q5VT33 79 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 LEMD1Q68G75 181 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 EBLN2Q6P2I7 272 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 SLC25A34Q6PIV7 304 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 Q86TA4 180 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 CIARTQ8N365 385 aaPredicted RBP4.63□□□□□ -1.67
VPS41-214ENST00000490924 C11orf42Q8N5U0 333 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 STPG4Q8N801 248 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 OR1N2Q8NGR9 330 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 OR2T6Q8NHC8 308 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 H1FXQ92522 213 aaKnown RBP4.63□□□□□ -1.67
VPS41-214ENST00000490924 MAP1LC3CQ9BXW4 147 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 TMEM133Q9H2Q1 129 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 HIGD1AQ9Y241 93 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 SIGLEC9Q9Y336 463 aa4.63□□□□□ -1.67
VPS41-214ENST00000490924 EP300Q09472 2414 aaPredicted RBP4.63□□□□□ -1.67
VPS41-214ENST00000490924 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.62□□□□□ -1.67
VPS41-214ENST00000490924 PGPA6NDG6 321 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 CYSRT1A8MQ03 144 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 SIVA1O15304 175 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 NDUFB8O95169 186 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 LEPROTL1O95214 131 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 MOSP00540 346 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 FRMD6-AS1P0C7T7 363 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 IGLC1P0CG04 106 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 CT45A10P0DMU9 189 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 IGHV1-8P0DP01 117 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 IGLL1P15814 213 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 G0S2P27469 103 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 LOXP28300 417 aaPredicted RBP4.62□□□□□ -1.67
VPS41-214ENST00000490924 FCGR2BP31994 310 aaPredicted RBP4.62□□□□□ -1.67
VPS41-214ENST00000490924 GNG10P50151 68 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 TCL1AP56279 114 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 HIST1H1AQ02539 215 aaPredicted RBP4.62□□□□□ -1.67
VPS41-214ENST00000490924 LPAL2Q16609 132 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 KLK9Q2XQG4 91 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 GDF5OSQ5U4N7 250 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 MORN5Q5VZ52 161 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 MOB3BQ86TA1 216 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 BPIFA4PQ86YQ2 179 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 DEFB125Q8N687 156 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 OR10W1Q8NGF6 305 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 OR10AG1Q8NH19 301 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 LEAP2Q969E1 77 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 SHANK2-AS3Q9BTD1 123 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 FAM103A1Q9BTL3 118 aaKnown RBP4.62□□□□□ -1.67
VPS41-214ENST00000490924 Q9H3A6 140 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 KLK9Q9UKQ9 250 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 U3KQK5 164 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 NBEAQ8NFP9 2946 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 YLPM1P49750 1951 aaKnown RBP4.62□□□□□ -1.67
VPS41-214ENST00000490924 TANC2Q9HCD6 1990 aa4.62□□□□□ -1.67
VPS41-214ENST00000490924 TET2Q6N021 2002 aaPredicted RBP4.62□□□□□ -1.67
VPS41-214ENST00000490924 TNCP24821 2201 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 WDFY3Q8IZQ1 3526 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 TRBV19A0A075B6N1 114 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 TRAV5A0A0B4J249 113 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 IGHV1-24A0A0C4DH33 117 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 LINC01546A6NGU7 62 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 OR4C46A6NHA9 309 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 OOSP1A8MZH6 123 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 VWC2LB2RUY7 222 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 B9A039 149 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 TEX22C9J3V5 150 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 H3BRN7 92 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 I3L2K1 104 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 CHEK1O14757 476 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 CD5LO43866 347 aa4.61□□□□□ -1.67
VPS41-214ENST00000490924 TOX4O94842 621 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms