RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 SAMD13Q5VXD3 122 aa11.72□□□□□ -0.53
SRGAP3-209ENST00000490889 GGNBP1Q5YKI7 109 aa11.72□□□□□ -0.53
SRGAP3-209ENST00000490889 RNF182Q8N6D2 247 aa11.72□□□□□ -0.53
SRGAP3-209ENST00000490889 OR11H7Q8NGC8 314 aa11.72□□□□□ -0.53
SRGAP3-209ENST00000490889 BCL7BQ9BQE9 202 aa11.72□□□□□ -0.53
SRGAP3-209ENST00000490889 CFDP00746 253 aaPredicted RBP11.71□□□□□ -0.53
SRGAP3-209ENST00000490889 PPP1R1AQ13522 171 aa11.71□□□□□ -0.53
SRGAP3-209ENST00000490889 ACOT7LQ6ZUV0 252 aa11.71□□□□□ -0.53
SRGAP3-209ENST00000490889 BPIFCQ8NFQ6 507 aa11.71□□□□□ -0.53
SRGAP3-209ENST00000490889 OR4D5Q8NGN0 318 aa11.71□□□□□ -0.53
SRGAP3-209ENST00000490889 MCFD2Q8NI22 146 aa11.71□□□□□ -0.53
SRGAP3-209ENST00000490889 TMEM208Q9BTX3 173 aa11.71□□□□□ -0.53
SRGAP3-209ENST00000490889 TMED3Q9Y3Q3 217 aa11.71□□□□□ -0.53
SRGAP3-209ENST00000490889 MED6O75586 246 aa11.7□□□□□ -0.54
SRGAP3-209ENST00000490889 SFT2D2O95562 160 aa11.7□□□□□ -0.54
SRGAP3-209ENST00000490889 HOXB5P09067 269 aa11.7□□□□□ -0.54
SRGAP3-209ENST00000490889 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
SRGAP3-209ENST00000490889 SPANXN5Q5MJ07 72 aa11.7□□□□□ -0.54
SRGAP3-209ENST00000490889 BAP18Q8IXM2 172 aa11.7□□□□□ -0.54
SRGAP3-209ENST00000490889 OR1B1Q8NGR6 318 aa11.7□□□□□ -0.54
SRGAP3-209ENST00000490889 CIB3Q96Q77 187 aaPredicted RBP11.7□□□□□ -0.54
SRGAP3-209ENST00000490889 KRTAP4-5Q9BYR2 181 aa11.7□□□□□ -0.54
SRGAP3-209ENST00000490889 V9GYH0 126 aa11.7□□□□□ -0.54
SRGAP3-209ENST00000490889 PIGBOS1A0A0B4J2F0 54 aa11.69□□□□□ -0.54
SRGAP3-209ENST00000490889 PLAC8L1A1L4L8 177 aa11.69□□□□□ -0.54
SRGAP3-209ENST00000490889 H3BRN7 92 aa11.69□□□□□ -0.54
SRGAP3-209ENST00000490889 AZU1P20160 251 aa11.69□□□□□ -0.54
SRGAP3-209ENST00000490889 AKR1C1Q04828 323 aa11.69□□□□□ -0.54
SRGAP3-209ENST00000490889 FGL1Q08830 312 aa11.69□□□□□ -0.54
SRGAP3-209ENST00000490889 TOMM5Q8N4H5 51 aa11.69□□□□□ -0.54
SRGAP3-209ENST00000490889 TMEM147Q9BVK8 224 aa11.69□□□□□ -0.54
SRGAP3-209ENST00000490889 TRAV12-2A0A075B6T6 113 aa11.68□□□□□ -0.54
SRGAP3-209ENST00000490889 DUSP14O95147 198 aaKnown RBP11.68□□□□□ -0.54
SRGAP3-209ENST00000490889 INSP01308 110 aa11.68□□□□□ -0.54
SRGAP3-209ENST00000490889 PRB4P10163 310 aaPredicted RBP11.68□□□□□ -0.54
SRGAP3-209ENST00000490889 RPP30P78346 268 aaKnown RBP11.68□□□□□ -0.54
SRGAP3-209ENST00000490889 FCN2Q15485 313 aa11.68□□□□□ -0.54
SRGAP3-209ENST00000490889 PYDC2Q56P42 97 aa11.68□□□□□ -0.54
SRGAP3-209ENST00000490889 C1orf134Q5TEV5 83 aa11.68□□□□□ -0.54
SRGAP3-209ENST00000490889 SLC25A21Q9BQT8 299 aaPredicted RBP11.68□□□□□ -0.54
SRGAP3-209ENST00000490889 SLC25A39Q9BZJ4 359 aaPredicted RBP11.68□□□□□ -0.54
SRGAP3-209ENST00000490889 PMS2P5A8MQ11 134 aa11.67□□□□□ -0.54
SRGAP3-209ENST00000490889 LYRM9A8MSI8 78 aa11.67□□□□□ -0.54
SRGAP3-209ENST00000490889 SOHLH1Q5JUK2 328 aa11.67□□□□□ -0.54
SRGAP3-209ENST00000490889 CYP2G1PQ6ZSU1 146 aa11.67□□□□□ -0.54
SRGAP3-209ENST00000490889 TMEM144Q7Z5S9 345 aa11.67□□□□□ -0.54
SRGAP3-209ENST00000490889 C15orf53Q8NAA6 179 aa11.67□□□□□ -0.54
SRGAP3-209ENST00000490889 GPR82Q96P67 336 aa11.67□□□□□ -0.54
SRGAP3-209ENST00000490889 SHANK2-AS3Q9BTD1 123 aa11.67□□□□□ -0.54
SRGAP3-209ENST00000490889 STRAPQ9Y3F4 350 aaKnown RBP11.67□□□□□ -0.54
SRGAP3-209ENST00000490889 APOBP04114 4563 aaKnown RBP11.67□□□□□ -0.54
SRGAP3-209ENST00000490889 ADAP1O75689 374 aa11.66□□□□□ -0.54
SRGAP3-209ENST00000490889 CCNKO75909 580 aa11.66□□□□□ -0.54
SRGAP3-209ENST00000490889 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
SRGAP3-209ENST00000490889 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
SRGAP3-209ENST00000490889 TSPOP30536 169 aa11.66□□□□□ -0.54
SRGAP3-209ENST00000490889 AP3S2P59780 193 aa11.66□□□□□ -0.54
SRGAP3-209ENST00000490889 POLR2GP62487 172 aaKnown RBP eCLIP11.66□□□□□ -0.54
SRGAP3-209ENST00000490889 ID3Q02535 119 aa11.66□□□□□ -0.54
SRGAP3-209ENST00000490889 TNP2Q05952 138 aa11.66□□□□□ -0.54
SRGAP3-209ENST00000490889 ZNF738Q8NE65 137 aa11.66□□□□□ -0.54
SRGAP3-209ENST00000490889 UHRF2Q96PU4 802 aa11.66□□□□□ -0.54
SRGAP3-209ENST00000490889 SMCO3A2RU48 225 aa11.65□□□□□ -0.54
SRGAP3-209ENST00000490889 BOLA2-SMG1P6H3BVE0 249 aa11.65□□□□□ -0.54
SRGAP3-209ENST00000490889 IL5P05113 134 aa11.65□□□□□ -0.54
SRGAP3-209ENST00000490889 ZNRF2Q8NHG8 242 aa11.65□□□□□ -0.54
SRGAP3-209ENST00000490889 NOL3O60936 208 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-209ENST00000490889 LINC00869P0C866 280 aa11.64□□□□□ -0.55
SRGAP3-209ENST00000490889 CXCL3P19876 107 aa11.64□□□□□ -0.55
SRGAP3-209ENST00000490889 FAM3BP58499 235 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-209ENST00000490889 PLP1P60201 277 aa11.64□□□□□ -0.55
SRGAP3-209ENST00000490889 HIST1H1AQ02539 215 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-209ENST00000490889 OR8A1Q8NGG7 326 aa11.64□□□□□ -0.55
SRGAP3-209ENST00000490889 PSENENQ9NZ42 101 aa11.64□□□□□ -0.55
SRGAP3-209ENST00000490889 HIGD1AQ9Y241 93 aa11.64□□□□□ -0.55
SRGAP3-209ENST00000490889 DNAH5Q8TE73 4624 aa11.63□□□□□ -0.55
SRGAP3-209ENST00000490889 A0A087X0K7 114 aa11.63□□□□□ -0.55
SRGAP3-209ENST00000490889 F5H768 121 aa11.63□□□□□ -0.55
SRGAP3-209ENST00000490889 HYPMO75409 117 aa11.63□□□□□ -0.55
SRGAP3-209ENST00000490889 RPL7P18124 248 aaKnown RBP11.63□□□□□ -0.55
SRGAP3-209ENST00000490889 RAP2BP61225 183 aa11.63□□□□□ -0.55
SRGAP3-209ENST00000490889 PATE2Q6UY27 113 aa11.63□□□□□ -0.55
SRGAP3-209ENST00000490889 ATG101Q9BSB4 218 aa11.63□□□□□ -0.55
SRGAP3-209ENST00000490889 NBDYA0A0U1RRE5 68 aa11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 C9orf170A2RU37 121 aa11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 MRPS12O15235 138 aaKnown RBP11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 SSSCA1O60232 199 aa11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 NUDT3O95989 172 aa11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 OR5G3P0C626 314 aa11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 S100A7P31151 101 aa11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 B2MP61769 119 aa11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 RRAS2P62070 204 aaPredicted RBP11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 RHOBP62745 196 aa11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 PSG3Q16557 428 aa11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 CCDC190Q86UF4 302 aa11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 DEDD2Q8WXF8 326 aa11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 LINC01587Q99440 93 aa11.62□□□□□ -0.55
SRGAP3-209ENST00000490889 ATP5G1P05496 136 aa11.61□□□□□ -0.55
SRGAP3-209ENST00000490889 HTN1P15515 57 aa11.61□□□□□ -0.55
SRGAP3-209ENST00000490889 ATP5G3P48201 142 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms