RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 HSD52Q0P140 79 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 C2orf83Q53S99 150 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 FAM120AOSQ5T036 256 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 RPP25LQ8N5L8 163 aaKnown RBP8.03□□□□□ -1.12
HDAC9-225ENST00000490851 OR10G4Q8NGN3 311 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 OR10G9Q8NGN4 311 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 OR10G7Q8NGN6 311 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 OR2T6Q8NHC8 308 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 FAM103A1Q9BTL3 118 aaKnown RBP8.03□□□□□ -1.12
HDAC9-225ENST00000490851 PPDPFQ9H3Y8 114 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 KIAA1456Q9P272 454 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 GNG13Q9P2W3 67 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 UQCR10Q9UDW1 63 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 TIMM9Q9Y5J7 89 aa8.03□□□□□ -1.12
HDAC9-225ENST00000490851 TRAV40A0A0B4J280 105 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 IGLC7A0M8Q6 106 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 MAP1LC3B2A6NCE7 125 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 MDKP21741 143 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-225ENST00000490851 OPRK1P41145 380 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 FA2HQ7L5A8 372 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 PIP4P2Q8N4L2 257 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 VN1R17PQ8TDU5 208 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 C1orf159Q96HA4 380 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 MCRIP2Q9BUT9 160 aaKnown RBP8.02□□□□□ -1.13
HDAC9-225ENST00000490851 MAP1LC3BQ9GZQ8 125 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 NPVFQ9HCQ7 196 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 SLC39A9Q9NUM3 307 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 CENPVL3A0A0U1RRI6 287 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 ZFP92A6NM28 416 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 NPFFO15130 113 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 PLA2G2AP14555 144 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 ELOBQ15370 118 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 MINOS1Q5TGZ0 78 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 TEPPQ6URK8 271 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 DPPA3Q6W0C5 159 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 OR2T10Q8NGZ9 312 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 SRSF12Q8WXF0 261 aaKnown RBP8.02□□□□□ -1.13
HDAC9-225ENST00000490851 GGTLC1Q9BX51 225 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 PXMP4Q9Y6I8 212 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 MINOS1-NBL1R4GNA1 71 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 TLN2Q9Y4G6 2542 aa8.02□□□□□ -1.13
HDAC9-225ENST00000490851 F5H768 121 aa8.01□□□□□ -1.13
HDAC9-225ENST00000490851 PF4P02776 101 aa8.01□□□□□ -1.13
HDAC9-225ENST00000490851 GATA2P23769 480 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-225ENST00000490851 TOMM20LQ6UXN7 152 aa8.01□□□□□ -1.13
HDAC9-225ENST00000490851 RBFOX3A6NFN3 312 aa8.01□□□□□ -1.13
HDAC9-225ENST00000490851 HBE1P02100 147 aa8.01□□□□□ -1.13
HDAC9-225ENST00000490851 TYMSP04818 313 aa8.01□□□□□ -1.13
HDAC9-225ENST00000490851 SUB1P53999 127 aaKnown RBP eCLIP8.01□□□□□ -1.13
HDAC9-225ENST00000490851 MRPL23Q16540 153 aaKnown RBP8.01□□□□□ -1.13
HDAC9-225ENST00000490851 CENPVQ7Z7K6 275 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-225ENST00000490851 LFNGQ8NES3 379 aa8.01□□□□□ -1.13
HDAC9-225ENST00000490851 OR1B1Q8NGR6 318 aa8.01□□□□□ -1.13
HDAC9-225ENST00000490851 AJUBAQ96IF1 538 aa8.01□□□□□ -1.13
HDAC9-225ENST00000490851 CTDSP1Q9GZU7 261 aa8.01□□□□□ -1.13
HDAC9-225ENST00000490851 FNDC4Q9H6D8 234 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-225ENST00000490851 HECTD1Q9ULT8 2610 aa8.01□□□□□ -1.13
HDAC9-225ENST00000490851 IGKV1OR2-108A0A075B7D4 117 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 GAGE12HA6NDE8 117 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 TEX22C9J3V5 150 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 J3QKU1 62 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 MPDU1O75352 247 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 MSMBP08118 114 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 IGLC1P0CG04 106 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 IGHV4-38-2P0DP08 117 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 MFAP2P55001 183 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 PAX8Q06710 450 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 CD69Q07108 199 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 ACOT6Q3I5F7 207 aaPredicted RBP8□□□□□ -1.13
HDAC9-225ENST00000490851 GTF2H5Q6ZYL4 71 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 STPG3Q8N7X2 389 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 TMEM116Q8NCL8 245 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 SCRT1Q9BWW7 348 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 C7orf69Q9H7B7 122 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 LSM4Q9Y4Z0 139 aaKnown RBP8□□□□□ -1.13
HDAC9-225ENST00000490851 SOX21Q9Y651 276 aaPredicted RBP8□□□□□ -1.13
HDAC9-225ENST00000490851 ITPR2Q14571 2701 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 FXYD3Q14802 87 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 OR4B1Q8NGF8 309 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 Q8WTZ3 238 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 RNF183Q96D59 192 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 RNF5Q99942 180 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 NDFIP1Q9BT67 221 aa8□□□□□ -1.13
HDAC9-225ENST00000490851 MRPL36Q9P0J6 103 aaKnown RBP8□□□□□ -1.13
HDAC9-225ENST00000490851 SH2D7A6NKC9 451 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-225ENST00000490851 OOSP1A8MZH6 123 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 DSCR9P59020 149 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 NPIPB3Q92617 1050 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 DERL1Q9BUN8 251 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 TEX15Q9BXT5 2789 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 ITPR3Q14573 2671 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 IGHV1-69DA0A0B4J2H0 117 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 CTXND1A0A1B0GTU2 59 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 B5MCH6 92 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 RNF223E7ERA6 249 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 NDUFA3O95167 84 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 IGHV1-69P01742 117 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 CXCL1P09341 107 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 FAM106CPP0CH98 169 aa7.99□□□□□ -1.13
HDAC9-225ENST00000490851 HIST1H1EP10412 219 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms