RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 LYRM2Q9NU23 88 aaPredicted RBP11.04□□□□□ -0.64
COL27A1-206ENST00000490831 X6R8D5 127 aa11.04□□□□□ -0.64
COL27A1-206ENST00000490831 ALMS1Q8TCU4 4167 aa11.04□□□□□ -0.64
COL27A1-206ENST00000490831 A8MTW9 85 aa11.03□□□□□ -0.64
COL27A1-206ENST00000490831 AGPAT2O15120 278 aa11.03□□□□□ -0.64
COL27A1-206ENST00000490831 JTBO76095 146 aa11.03□□□□□ -0.64
COL27A1-206ENST00000490831 CAV2P51636 162 aa11.03□□□□□ -0.64
COL27A1-206ENST00000490831 SLC38A11Q08AI6 406 aa11.03□□□□□ -0.64
COL27A1-206ENST00000490831 RAB32Q13637 225 aa11.03□□□□□ -0.64
COL27A1-206ENST00000490831 PMS2P11Q13670 270 aa11.03□□□□□ -0.64
COL27A1-206ENST00000490831 VWC2Q2TAL6 325 aa11.03□□□□□ -0.64
COL27A1-206ENST00000490831 PATE2Q6UY27 113 aa11.03□□□□□ -0.64
COL27A1-206ENST00000490831 MGST2Q99735 147 aa11.03□□□□□ -0.64
COL27A1-206ENST00000490831 MARVELD1Q9BSK0 173 aa11.03□□□□□ -0.64
COL27A1-206ENST00000490831 DOK5Q9P104 306 aa11.03□□□□□ -0.64
COL27A1-206ENST00000490831 HYDINQ4G0P3 5121 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 A0A0J9YX75 114 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 FAM24AA6NFZ4 105 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 RPL7P18124 248 aaKnown RBP11.02□□□□□ -0.65
COL27A1-206ENST00000490831 SULT1A1P50225 295 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 BCAP31P51572 246 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 DEFB1P60022 68 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 TMEM252Q8N6L7 170 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 C16orf92Q96LL3 132 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 C20orf173Q96LM9 149 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 UHRF2Q96PU4 802 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 MFFQ9GZY8 342 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 ARL6Q9H0F7 186 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 HRH4Q9H3N8 390 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 RPRMQ9NS64 109 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 CLEC5AQ9NY25 188 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 RNF24Q9Y225 148 aa11.02□□□□□ -0.65
COL27A1-206ENST00000490831 A0A087X0K7 114 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 IGHV4-28A0A0C4DH34 117 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 INMT-MINDY4F8WBC2 141 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 GOSR2O14653 212 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 MRPS12O15235 138 aaKnown RBP11.01□□□□□ -0.65
COL27A1-206ENST00000490831 CST7O76096 145 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 OR5G3P0C626 314 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 RBMY1A1P0DJD3 496 aaKnown RBP11.01□□□□□ -0.65
COL27A1-206ENST00000490831 RBMY1CP0DJD4 496 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 S100A11P31949 105 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 S100A10P60903 97 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 RBMY1FQ15415 496 aaKnown RBP11.01□□□□□ -0.65
COL27A1-206ENST00000490831 ZNF709Q8N972 641 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 C11orf45Q8TAV5 145 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 CHAC2Q8WUX2 184 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 ARV1Q9H2C2 271 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 XCL2Q9UBD3 114 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 WDR83OSQ9Y284 106 aa11.01□□□□□ -0.65
COL27A1-206ENST00000490831 TRAV8-2A0A0B4J237 113 aa11□□□□□ -0.65
COL27A1-206ENST00000490831 IGSF23A1L1A6 192 aa11□□□□□ -0.65
COL27A1-206ENST00000490831 DEFB4AO15263 64 aa11□□□□□ -0.65
COL27A1-206ENST00000490831 DEFA1P59665 94 aa11□□□□□ -0.65
COL27A1-206ENST00000490831 DEFA3P59666 94 aa11□□□□□ -0.65
COL27A1-206ENST00000490831 EBLN2Q6P2I7 272 aa11□□□□□ -0.65
COL27A1-206ENST00000490831 ZNF705AQ6ZN79 300 aaPredicted RBP11□□□□□ -0.65
COL27A1-206ENST00000490831 PHLDA1Q8WV24 401 aaPredicted RBP11□□□□□ -0.65
COL27A1-206ENST00000490831 NEU1Q99519 415 aa11□□□□□ -0.65
COL27A1-206ENST00000490831 NMES1Q9C002 83 aa11□□□□□ -0.65
COL27A1-206ENST00000490831 UQCC1Q9NVA1 299 aa11□□□□□ -0.65
COL27A1-206ENST00000490831 KLK5Q9Y337 293 aaPredicted RBP11□□□□□ -0.65
COL27A1-206ENST00000490831 ELOA3CA0A087WX78 387 aaPredicted RBP10.99□□□□□ -0.65
COL27A1-206ENST00000490831 ZNF705FA8MVS1 300 aaPredicted RBP10.99□□□□□ -0.65
COL27A1-206ENST00000490831 F6UB75 175 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 ZNF705DP0CH99 300 aaPredicted RBP10.99□□□□□ -0.65
COL27A1-206ENST00000490831 ZNF705BP0CI00 300 aaPredicted RBP10.99□□□□□ -0.65
COL27A1-206ENST00000490831 CAMLGP49069 296 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 NANOS2P60321 138 aaKnown RBP10.99□□□□□ -0.65
COL27A1-206ENST00000490831 HBG1P69891 147 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 HBG2P69892 147 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 PRR20EP86478 221 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 PRR20CP86479 221 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 PRR20DP86480 221 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 PRR20BP86481 221 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 PRR20AP86496 221 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 RAB31Q13636 194 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 ATP6V1FQ16864 119 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 FAM78BQ5VT40 261 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 STX12Q86Y82 276 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 TMEM37Q8WXS4 190 aa10.99□□□□□ -0.65
COL27A1-206ENST00000490831 SIX6O95475 246 aa10.98□□□□□ -0.65
COL27A1-206ENST00000490831 CYCSP99999 105 aaKnown RBP10.98□□□□□ -0.65
COL27A1-206ENST00000490831 PSG9Q00887 426 aa10.98□□□□□ -0.65
COL27A1-206ENST00000490831 AMTNQ6UX39 209 aa10.98□□□□□ -0.65
COL27A1-206ENST00000490831 LINC00305Q7Z4B0 112 aa10.98□□□□□ -0.65
COL27A1-206ENST00000490831 OR4B1Q8NGF8 309 aa10.98□□□□□ -0.65
COL27A1-206ENST00000490831 IGKV3-20P01619 116 aa10.97□□□□□ -0.65
COL27A1-206ENST00000490831 CXCL2P19875 107 aa10.97□□□□□ -0.65
COL27A1-206ENST00000490831 RPL29P47914 159 aaKnown RBP10.97□□□□□ -0.65
COL27A1-206ENST00000490831 LINC00476Q8WZB0 136 aa10.97□□□□□ -0.65
COL27A1-206ENST00000490831 SLC35B3Q9H1N7 401 aa10.97□□□□□ -0.65
COL27A1-206ENST00000490831 SMIM9A6NGZ8 99 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 E5RGE8 158 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 H0YIZ8 118 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 COX7A2P2O60397 106 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 DUSP14O95147 198 aaKnown RBP10.96□□□□□ -0.65
COL27A1-206ENST00000490831 RLN2P04090 185 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 CXCL3P19876 107 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 H2BFSP57053 126 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms