RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CHRDL1Q9BU40 450 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 MCRIP2Q9BUT9 160 aaKnown RBP5.79□□□□□ -1.48
CLDN1-202ENST00000490800 GPR61Q9BZJ8 451 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 MAP1LC3BQ9GZQ8 125 aa5.79□□□□□ -1.48
CLDN1-202ENST00000490800 KMT2CQ8NEZ4 4911 aaKnown RBP5.78□□□□□ -1.48
CLDN1-202ENST00000490800 TRBV7-1A0A0A6YYK4 115 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 A0A1W2PPV4 95 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 RAB19A4D1S5 217 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 OR2T8A6NH00 312 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 HMGB3O15347 200 aaKnown RBP5.78□□□□□ -1.48
CLDN1-202ENST00000490800 COX7A2P2O60397 106 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 CLEC3BP05452 202 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 FABP1P07148 127 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 CTSGP08311 255 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 RD3LP0DJH9 198 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 PSMB8P28062 276 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 GPR183P32249 361 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 RAB9AP51151 201 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 PLP1P60201 277 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 YPEL3P61236 119 aaPredicted RBP5.78□□□□□ -1.48
CLDN1-202ENST00000490800 RHOBP62745 196 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 FOXE3Q13461 319 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 KIAA0141Q14154 515 aaPredicted RBP5.78□□□□□ -1.48
CLDN1-202ENST00000490800 MIR17HGQ75NE6 70 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 EIF4E3Q8N5X7 224 aaKnown RBP5.78□□□□□ -1.48
CLDN1-202ENST00000490800 RNF152Q8N8N0 203 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 GATAD1Q8WUU5 269 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 USMG5Q96IX5 58 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 SCRT1Q9BWW7 348 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 SEPSECSQ9HD40 501 aaKnown RBP5.78□□□□□ -1.48
CLDN1-202ENST00000490800 DNAJC4Q9NNZ3 241 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 DOK5Q9P104 306 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 FUT9Q9Y231 359 aa5.78□□□□□ -1.48
CLDN1-202ENST00000490800 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.77□□□□□ -1.49
CLDN1-202ENST00000490800 B5MCH6 92 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 HYPMO75409 117 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 STAG3L2P0CL84 134 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 STAG3L3P0CL85 134 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 ORM2P19652 201 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 LYZP61626 148 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 FAM78BQ5VT40 261 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 MORN5Q5VZ52 161 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 C10orf113Q5VZT2 155 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 CLEC19AQ6UXS0 136 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 ZNF491Q8N8L2 437 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 OR11H1Q8NG94 326 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 OR51G1Q8NGK1 321 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 OR1L4Q8NGR5 311 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 OR1B1Q8NGR6 318 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 FAM167A-AS1Q96KT0 104 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 FAM210AQ96ND0 272 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 ATP6V0BQ99437 205 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 PFDN5Q99471 154 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 RNF2Q99496 336 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 C1orf43Q9BWL3 253 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 MRPL32Q9BYC8 188 aaKnown RBP5.77□□□□□ -1.49
CLDN1-202ENST00000490800 TMPRSS5Q9H3S3 457 aa5.77□□□□□ -1.49
CLDN1-202ENST00000490800 GAR1Q9NY12 217 aaKnown RBP5.77□□□□□ -1.49
CLDN1-202ENST00000490800 MRPL27Q9P0M9 148 aaKnown RBP5.77□□□□□ -1.49
CLDN1-202ENST00000490800 COL7A1Q02388 2944 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 TRAV5A0A0B4J249 113 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 A0A0G2JLM5 398 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 PPP5D1E7EU14 171 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 NUPL2O15504 423 aaKnown RBP5.76□□□□□ -1.49
CLDN1-202ENST00000490800 TGOLN2O43493 480 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 SCGB2A1O75556 95 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 OR2C1O95371 312 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 CXorf1O96002 111 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 TRBV12-3P01733 135 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 IGHV3-11P01762 117 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 IL4P05112 153 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 CD5P06127 495 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 ARL14EPLP0DKL9 152 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 C8orf88P0DMB2 117 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 PMS2P11Q13670 270 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 GUK1Q16774 197 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 ZNF343Q6P1L6 599 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 UQCC3Q6UW78 93 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 ZNF600Q6ZNG1 722 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 MYOZ3Q8TDC0 251 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 Q8WTZ3 238 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 RNF125Q96EQ8 232 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 ZNF503Q96F45 646 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 UHRF2Q96PU4 802 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 OR5B12Q96R08 314 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 B9D2Q9BPU9 175 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 SLC25A2Q9BXI2 301 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 TMEM231Q9H6L2 316 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 GNB4Q9HAV0 340 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 TECRQ9NZ01 308 aaKnown RBP5.76□□□□□ -1.49
CLDN1-202ENST00000490800 ZMAT5Q9UDW3 170 aaKnown RBP5.76□□□□□ -1.49
CLDN1-202ENST00000490800 HIGD1AQ9Y241 93 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 RYR3Q15413 4870 aa5.76□□□□□ -1.49
CLDN1-202ENST00000490800 IGHV3-35A0A0C4DH35 117 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 LOC102723971A0A1B0GUV8 181 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 RBFOX3A6NFN3 312 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 C9JQL5 133 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 I3L521 148 aa5.75□□□□□ -1.49
CLDN1-202ENST00000490800 GCHFRP30047 84 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms