RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 KRTAP9-6A0A140TA67 174 aa8.34□□□□□ -1.07
VARS2-210ENST00000490699 ZNF98A6NK75 572 aa8.34□□□□□ -1.07
VARS2-210ENST00000490699 H3BRN7 92 aa8.34□□□□□ -1.07
VARS2-210ENST00000490699 OR7C2O60412 319 aa8.34□□□□□ -1.07
VARS2-210ENST00000490699 C8orf88P0DMB2 117 aa8.34□□□□□ -1.07
VARS2-210ENST00000490699 MEOX2P50222 304 aa8.34□□□□□ -1.07
VARS2-210ENST00000490699 LCN12Q6JVE5 192 aa8.34□□□□□ -1.07
VARS2-210ENST00000490699 OR2K2Q8NGT1 345 aa8.34□□□□□ -1.07
VARS2-210ENST00000490699 FAM213BQ8TBF2 198 aa8.34□□□□□ -1.07
VARS2-210ENST00000490699 LRRC20Q8TCA0 184 aa8.34□□□□□ -1.07
VARS2-210ENST00000490699 RNF141Q8WVD5 230 aa8.34□□□□□ -1.07
VARS2-210ENST00000490699 UHRF2Q96PU4 802 aa8.34□□□□□ -1.07
VARS2-210ENST00000490699 IGHV3OR16-13A0A075B7E8 117 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 IGHV3-74A0A0B4J1X5 117 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 IGHV3-66A0A0C4DH42 116 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 CTXND1A0A1B0GTU2 59 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 ZNF785A8K8V0 405 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 CHEK1O14757 476 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 BUB3O43684 328 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 CSN3P07498 182 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 SIGLEC15Q6ZMC9 328 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 PQLC2Q6ZP29 291 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 TCF24Q7RTU0 167 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 IQCF2Q8IXL9 164 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 TMEM37Q8WXS4 190 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 SCRT1Q9BWW7 348 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 VSIRQ9H7M9 311 aa8.33□□□□□ -1.08
VARS2-210ENST00000490699 COL6A5A8TX70 2615 aa8.32□□□□□ -1.08
VARS2-210ENST00000490699 TRAV25A0A0B4J276 109 aa8.32□□□□□ -1.08
VARS2-210ENST00000490699 DNASE2O00115 360 aaPredicted RBP8.32□□□□□ -1.08
VARS2-210ENST00000490699 CXorf1O96002 111 aa8.32□□□□□ -1.08
VARS2-210ENST00000490699 HBE1P02100 147 aa8.32□□□□□ -1.08
VARS2-210ENST00000490699 SULT1A2P50226 295 aa8.32□□□□□ -1.08
VARS2-210ENST00000490699 RAB14P61106 215 aa8.32□□□□□ -1.08
VARS2-210ENST00000490699 GCSAMLQ5JQS6 135 aa8.32□□□□□ -1.08
VARS2-210ENST00000490699 C16orf54Q6UWD8 224 aa8.32□□□□□ -1.08
VARS2-210ENST00000490699 ALKAL2Q6UX46 152 aa8.32□□□□□ -1.08
VARS2-210ENST00000490699 PATE2Q6UY27 113 aa8.32□□□□□ -1.08
VARS2-210ENST00000490699 RPRMQ9NS64 109 aa8.32□□□□□ -1.08
VARS2-210ENST00000490699 UBQLN2Q9UHD9 624 aa8.32□□□□□ -1.08
VARS2-210ENST00000490699 MAP1LC3B2A6NCE7 125 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 OR4C46A6NHA9 309 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 ZNF705EA8MWA4 302 aaPredicted RBP8.31□□□□□ -1.08
VARS2-210ENST00000490699 H2AFB1P0C5Y9 115 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 UBE2L3P68036 154 aaKnown RBP8.31□□□□□ -1.08
VARS2-210ENST00000490699 BLOC1S1P78537 153 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 GUCA2BQ16661 112 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 GUK1Q16774 197 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 LEMD1Q68G75 181 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 TEX261Q6UWH6 196 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 IL34Q6ZMJ4 242 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 MIR17HGQ75NE6 70 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 WFDC9Q8NEX5 89 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 RAB24Q969Q5 203 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 PAXXQ9BUH6 204 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 MAP1LC3BQ9GZQ8 125 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 OR51M1Q9H341 326 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 SEPSECSQ9HD40 501 aaKnown RBP8.31□□□□□ -1.08
VARS2-210ENST00000490699 TMEM167BQ9NRX6 74 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 TMEM14CQ9P0S9 112 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 U3KQE9 123 aa8.31□□□□□ -1.08
VARS2-210ENST00000490699 APOHP02749 345 aaPredicted RBP8.3□□□□□ -1.08
VARS2-210ENST00000490699 ID1P41134 155 aa8.3□□□□□ -1.08
VARS2-210ENST00000490699 PPT1P50897 306 aa8.3□□□□□ -1.08
VARS2-210ENST00000490699 DEFB114Q30KQ6 69 aa8.3□□□□□ -1.08
VARS2-210ENST00000490699 LCN15Q6UWW0 184 aa8.3□□□□□ -1.08
VARS2-210ENST00000490699 ZNF767PQ75MW2 155 aa8.3□□□□□ -1.08
VARS2-210ENST00000490699 RPP25LQ8N5L8 163 aaKnown RBP8.3□□□□□ -1.08
VARS2-210ENST00000490699 SFT2D1Q8WV19 159 aa8.3□□□□□ -1.08
VARS2-210ENST00000490699 GLMPQ8WWB7 406 aa8.3□□□□□ -1.08
VARS2-210ENST00000490699 SPAG8Q99932 426 aaPredicted RBP8.3□□□□□ -1.08
VARS2-210ENST00000490699 NRN1Q9NPD7 142 aa8.3□□□□□ -1.08
VARS2-210ENST00000490699 MLXQ9UH92 298 aa8.3□□□□□ -1.08
VARS2-210ENST00000490699 RFNGQ9Y644 331 aa8.3□□□□□ -1.08
VARS2-210ENST00000490699 WNK1Q9H4A3 2382 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 IGKV3-7A0A075B6H7 116 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 IGLV1-51P01701 117 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 STAG3L2P0CL84 134 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 STAG3L3P0CL85 134 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 ARL14EPLP0DKL9 152 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 HIST1H1EP10412 219 aaKnown RBP8.29□□□□□ -1.08
VARS2-210ENST00000490699 IGLL1P15814 213 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 CMC4P56277 68 aaPredicted RBP8.29□□□□□ -1.08
VARS2-210ENST00000490699 SNRPD3P62318 126 aaKnown RBP8.29□□□□□ -1.08
VARS2-210ENST00000490699 CD300EQ496F6 205 aaPredicted RBP8.29□□□□□ -1.08
VARS2-210ENST00000490699 FAM74A1Q5RGS3 127 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 SPATA31B1PQ5VZV4 182 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 ZNF680Q8NEM1 530 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 SAT2Q96F10 170 aaPredicted RBP8.29□□□□□ -1.08
VARS2-210ENST00000490699 ZNF414Q96IQ9 312 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 SLC50A1Q9BRV3 221 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 SLC25A2Q9BXI2 301 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 AAMDCQ9H7C9 122 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 CLEC5AQ9NY25 188 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 TENM1Q9UKZ4 2725 aa8.29□□□□□ -1.08
VARS2-210ENST00000490699 TRAV2A0A0B4J234 112 aa8.28□□□□□ -1.08
VARS2-210ENST00000490699 TRAV5A0A0B4J249 113 aa8.28□□□□□ -1.08
VARS2-210ENST00000490699 TSPAN4O14817 238 aa8.28□□□□□ -1.08
VARS2-210ENST00000490699 HMGB3O15347 200 aaKnown RBP8.28□□□□□ -1.08
VARS2-210ENST00000490699 IFNA1P01562 189 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms