RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 C10orf113Q5VZT2 155 aa12.78□□□□□ -0.36
RAPGEF3-212ENST00000490387 LINC00305Q7Z4B0 112 aa12.78□□□□□ -0.36
RAPGEF3-212ENST00000490387 ASCL2Q99929 193 aa12.78□□□□□ -0.36
RAPGEF3-212ENST00000490387 SH3BGRL3Q9H299 93 aa12.78□□□□□ -0.36
RAPGEF3-212ENST00000490387 GP9P14770 177 aa12.77□□□□□ -0.37
RAPGEF3-212ENST00000490387 FFAR4Q5NUL3 377 aa12.77□□□□□ -0.37
RAPGEF3-212ENST00000490387 LEMD1Q68G75 181 aa12.77□□□□□ -0.37
RAPGEF3-212ENST00000490387 PPP1R14BQ96C90 147 aa12.77□□□□□ -0.37
RAPGEF3-212ENST00000490387 GNPNAT1Q96EK6 184 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF3-212ENST00000490387 SPAG8Q99932 426 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF3-212ENST00000490387 SLC25A32Q9H2D1 315 aa12.77□□□□□ -0.37
RAPGEF3-212ENST00000490387 U3KQK5 164 aa12.77□□□□□ -0.37
RAPGEF3-212ENST00000490387 HELTA6NFD8 242 aa12.76□□□□□ -0.37
RAPGEF3-212ENST00000490387 SIGLEC15Q6ZMC9 328 aa12.76□□□□□ -0.37
RAPGEF3-212ENST00000490387 RBPMS2Q6ZRY4 209 aaKnown RBP12.76□□□□□ -0.37
RAPGEF3-212ENST00000490387 S100A7AQ86SG5 101 aa12.76□□□□□ -0.37
RAPGEF3-212ENST00000490387 C17orf77Q96MU5 243 aa12.76□□□□□ -0.37
RAPGEF3-212ENST00000490387 SEPSECSQ9HD40 501 aaKnown RBP12.76□□□□□ -0.37
RAPGEF3-212ENST00000490387 MRPS12O15235 138 aaKnown RBP12.75□□□□□ -0.37
RAPGEF3-212ENST00000490387 PFDN1O60925 122 aa12.75□□□□□ -0.37
RAPGEF3-212ENST00000490387 SPP1P10451 314 aa12.75□□□□□ -0.37
RAPGEF3-212ENST00000490387 NKX2-5P52952 324 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF3-212ENST00000490387 SERF2P84101 59 aa12.75□□□□□ -0.37
RAPGEF3-212ENST00000490387 OR8I2Q8N0Y5 310 aa12.75□□□□□ -0.37
RAPGEF3-212ENST00000490387 STOML3Q8TAV4 291 aa12.75□□□□□ -0.37
RAPGEF3-212ENST00000490387 GPR82Q96P67 336 aa12.75□□□□□ -0.37
RAPGEF3-212ENST00000490387 ZNF471Q9BX82 626 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF3-212ENST00000490387 MS4A6AQ9H2W1 248 aa12.75□□□□□ -0.37
RAPGEF3-212ENST00000490387 SLC25A22Q9H936 323 aa12.75□□□□□ -0.37
RAPGEF3-212ENST00000490387 TRAV2A0A0B4J234 112 aa12.74□□□□□ -0.37
RAPGEF3-212ENST00000490387 M6PRP20645 277 aa12.74□□□□□ -0.37
RAPGEF3-212ENST00000490387 RAB2AP61019 212 aa12.74□□□□□ -0.37
RAPGEF3-212ENST00000490387 GUCA2BQ16661 112 aa12.74□□□□□ -0.37
RAPGEF3-212ENST00000490387 SPATA31B1PQ5VZV4 182 aa12.74□□□□□ -0.37
RAPGEF3-212ENST00000490387 DCANP1Q8TF63 244 aa12.74□□□□□ -0.37
RAPGEF3-212ENST00000490387 MRPL32Q9BYC8 188 aaKnown RBP12.74□□□□□ -0.37
RAPGEF3-212ENST00000490387 RNF24Q9Y225 148 aa12.74□□□□□ -0.37
RAPGEF3-212ENST00000490387 TRAV5A0A0B4J249 113 aa12.73□□□□□ -0.37
RAPGEF3-212ENST00000490387 RPL7P18124 248 aaKnown RBP12.73□□□□□ -0.37
RAPGEF3-212ENST00000490387 ACOT6Q3I5F7 207 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF3-212ENST00000490387 FAM78BQ5VT40 261 aa12.73□□□□□ -0.37
RAPGEF3-212ENST00000490387 MIR17HGQ75NE6 70 aa12.73□□□□□ -0.37
RAPGEF3-212ENST00000490387 FAM167A-AS1Q96KT0 104 aa12.73□□□□□ -0.37
RAPGEF3-212ENST00000490387 NRN1Q9NPD7 142 aa12.73□□□□□ -0.37
RAPGEF3-212ENST00000490387 FUT9Q9Y231 359 aa12.73□□□□□ -0.37
RAPGEF3-212ENST00000490387 IGKV3-7A0A075B6H7 116 aa12.72□□□□□ -0.37
RAPGEF3-212ENST00000490387 K7EQG2 157 aa12.72□□□□□ -0.37
RAPGEF3-212ENST00000490387 GALR1P47211 349 aa12.72□□□□□ -0.37
RAPGEF3-212ENST00000490387 RPL11P62913 178 aaKnown RBP12.72□□□□□ -0.37
RAPGEF3-212ENST00000490387 BAP18Q8IXM2 172 aa12.72□□□□□ -0.37
RAPGEF3-212ENST00000490387 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
RAPGEF3-212ENST00000490387 RPP25LQ8N5L8 163 aaKnown RBP12.72□□□□□ -0.37
RAPGEF3-212ENST00000490387 SLC25A2Q9BXI2 301 aa12.72□□□□□ -0.37
RAPGEF3-212ENST00000490387 A0A087X0K7 114 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 OR4C46A6NHA9 309 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 SOCS3O14543 225 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 MBP02144 154 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 SEC11BP0C7V7 166 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 IGLC2P0DOY2 106 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 TPT1P13693 172 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 RHOBP62745 196 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 EIF5AP63241 154 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 SLC51BQ86UW2 128 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 BPIFA4PQ86YQ2 179 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 Q8N1Y9 231 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 STXBP6Q8NFX7 210 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 OR10G4Q8NGN3 311 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 OR10G9Q8NGN4 311 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 OR10G7Q8NGN6 311 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 RPRMQ9NS64 109 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 C19orf73Q9NVV2 129 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 PLA2G2EQ9NZK7 142 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 TMEM14CQ9P0S9 112 aa12.71□□□□□ -0.37
RAPGEF3-212ENST00000490387 BOLA2-SMG1P6H3BVE0 249 aa12.7□□□□□ -0.38
RAPGEF3-212ENST00000490387 CD7P09564 240 aa12.7□□□□□ -0.38
RAPGEF3-212ENST00000490387 FRMD6-AS1P0C7T7 363 aa12.7□□□□□ -0.38
RAPGEF3-212ENST00000490387 PAFAH1B2P68402 229 aa12.7□□□□□ -0.38
RAPGEF3-212ENST00000490387 ODF3L2Q3SX64 289 aa12.7□□□□□ -0.38
RAPGEF3-212ENST00000490387 TMEM41BQ5BJD5 291 aa12.7□□□□□ -0.38
RAPGEF3-212ENST00000490387 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.7□□□□□ -0.38
RAPGEF3-212ENST00000490387 SBSPONQ8IVN8 264 aa12.7□□□□□ -0.38
RAPGEF3-212ENST00000490387 FAM24BQ8N5W8 94 aa12.7□□□□□ -0.38
RAPGEF3-212ENST00000490387 FAM110AQ9BQ89 295 aa12.7□□□□□ -0.38
RAPGEF3-212ENST00000490387 DNASE2O00115 360 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF3-212ENST00000490387 TFPI2P48307 235 aa12.69□□□□□ -0.38
RAPGEF3-212ENST00000490387 ZNF503Q96F45 646 aa12.69□□□□□ -0.38
RAPGEF3-212ENST00000490387 TENM3Q9P273 2699 aa12.69□□□□□ -0.38
RAPGEF3-212ENST00000490387 H3BQ15 152 aa12.68□□□□□ -0.38
RAPGEF3-212ENST00000490387 C4BPBP20851 252 aa12.68□□□□□ -0.38
RAPGEF3-212ENST00000490387 CD81P60033 236 aa12.68□□□□□ -0.38
RAPGEF3-212ENST00000490387 FAM122CQ6P4D5 195 aa12.68□□□□□ -0.38
RAPGEF3-212ENST00000490387 GTSCR1Q86UQ5 136 aa12.68□□□□□ -0.38
RAPGEF3-212ENST00000490387 WFDC3Q8IUB2 231 aa12.68□□□□□ -0.38
RAPGEF3-212ENST00000490387 TMED6Q8WW62 240 aa12.68□□□□□ -0.38
RAPGEF3-212ENST00000490387 HRH4Q9H3N8 390 aa12.68□□□□□ -0.38
RAPGEF3-212ENST00000490387 BOLA1Q9Y3E2 137 aa12.68□□□□□ -0.38
RAPGEF3-212ENST00000490387 EIF3GO75821 320 aaKnown RBP eCLIP12.67□□□□□ -0.38
RAPGEF3-212ENST00000490387 PYYP10082 97 aa12.67□□□□□ -0.38
RAPGEF3-212ENST00000490387 ATF4P18848 351 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF3-212ENST00000490387 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms