RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 LINC00470Q9BZP3 86 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 OR2H1Q9GZK4 316 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 COMMD5Q9GZQ3 224 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 PBOV1Q9GZY1 135 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 LPAR5Q9H1C0 372 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 GPR84Q9NQS5 396 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 ERG28Q9UKR5 140 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 TRAPPC2LQ9UL33 140 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 HIGD1AQ9Y241 93 aa0.58□□□□□ -2.32
CCDC39-206ENST00000489868 RTL1A6NKG5 1358 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 ROBO3Q96MS0 1386 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 MED23Q9ULK4 1368 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 BICRAQ9NZM4 1560 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 LAMB4A4D0S4 1761 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 BCL9O00512 1426 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 FAM135BQ49AJ0 1406 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 CD109Q6YHK3 1445 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 VPS8Q8N3P4 1428 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 ARAP1Q96P48 1450 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 CECR2Q9BXF3 1484 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 TRBV19A0A075B6N1 114 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 TRAV5A0A0B4J249 113 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 IGHV1-69-2A0A0G2JMI3 117 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 A0A0J9YY10 115 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 A0A1B0GW54 56 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 A0A1B0GW64 132 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 A0A1B0GX78 115 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 TMEM218A2RU14 115 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 OR4C45A6NMZ5 311 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 FABP5P3A8MUU1 101 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 GABARAPH6UMI1 98 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 J3QR89 54 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 J3QRK9 145 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 M0R143 59 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 CORTO00230 105 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 SNAPC5O75971 98 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 DPM2O94777 84 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 OR2H2O95918 312 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 IFNA7P01567 189 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 IFNA17P01571 189 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 SCTP09683 121 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 FGF7P21781 194 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 RPS4Y1P22090 263 aaKnown RBP0.57□□□□□ -2.32
CCDC39-206ENST00000489868 EVI2AP22794 236 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 PPIBP23284 216 aaKnown RBP0.57□□□□□ -2.32
CCDC39-206ENST00000489868 KDELR1P24390 212 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 SRIP30626 198 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 POLR2HP52434 150 aaKnown RBP0.57□□□□□ -2.32
CCDC39-206ENST00000489868 RPS25P62851 125 aaKnown RBP0.57□□□□□ -2.32
CCDC39-206ENST00000489868 HBA1P69905 142 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 PSG9Q00887 426 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 SCGB2B2Q4G0G5 96 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 NCMAPQ5T1S8 102 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 FKBP1CQ5VVH2 108 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 TEX261Q6UWH6 196 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 HRCT1Q6UXD1 115 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 DEFB128Q7Z7B8 93 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 SNX29P2Q8IUI4 249 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 CTAGE3PQ8IX95 158 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 PDZD9Q8IXQ8 264 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 EXOC3-AS1Q8N2X6 119 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 ACBD7Q8N6N7 88 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 TCTEX1D1Q8N7M0 179 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 OR5A1Q8NGJ0 315 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 OR5H6Q8NGV6 325 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 SLC25A40Q8TBP6 338 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 SFT2D1Q8WV19 159 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 SLAMF6Q96DU3 332 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 AP1S3Q96PC3 154 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 LXNQ9BS40 222 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 PRADC1Q9BSG0 188 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 PSMG3Q9BT73 122 aaPredicted RBP0.57□□□□□ -2.32
CCDC39-206ENST00000489868 OR2J1Q9GZK6 312 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 EFCAB1Q9HAE3 211 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 CXorf21Q9HAI6 301 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 TAF9BQ9HBM6 251 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 FBXL12Q9NXK8 326 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 TVP23BQ9NYZ1 205 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 LAMTOR3Q9UHA4 124 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 NAT8BQ9UHF3 227 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 PCTPQ9UKL6 214 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 ANAPC10Q9UM13 185 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 TNFSF18Q9UNG2 199 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 BAIAP2Q9UQB8 552 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 CYSLTR1Q9Y271 337 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 ZFP30Q9Y2G7 519 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 LAMTOR2Q9Y2Q5 125 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 MED31Q9Y3C7 131 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 FAM135AQ9P2D6 1515 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 HEATR5AQ86XA9 2040 aa0.57□□□□□ -2.32
CCDC39-206ENST00000489868 OVOS2A0A0G2JMS6 1433 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 ZNF609O15014 1411 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 DCCP43146 1447 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 TNS3Q68CZ2 1445 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 UHRF1BP1LA0JNW5 1464 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 A2MP01023 1474 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 CEP152O94986 1710 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 TRBV20OR9-2A0A075B6H5 130 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 TRAV9-1A0A075B6T8 112 aa0.56□□□□□ -2.32
CCDC39-206ENST00000489868 TRAV4A0A0B4J268 109 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms