RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 SDC2P34741 201 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 CKS1BP61024 79 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 RPS28P62857 69 aaKnown RBP2.09□□□□□ -2.07
VPS26A-206ENST00000489794 PSPHP78330 225 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 TPRXLQ17RH7 258 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 KRTAP13-4Q3LI77 160 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 ZNF826PQ6ZT77 177 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 CXCL16Q9H2A7 254 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 TCEAL2Q9H3H9 227 aaPredicted RBP2.09□□□□□ -2.07
VPS26A-206ENST00000489794 NHP2Q9NX24 153 aaKnown RBP2.09□□□□□ -2.07
VPS26A-206ENST00000489794 TAS2R4Q9NYW5 299 aa2.09□□□□□ -2.07
VPS26A-206ENST00000489794 SBF1O95248 1867 aa2.09□□□□□ -2.08
VPS26A-206ENST00000489794 NCKAP5O14513 1909 aa2.09□□□□□ -2.08
VPS26A-206ENST00000489794 CPDO75976 1380 aa2.09□□□□□ -2.08
VPS26A-206ENST00000489794 PIK3C2AO00443 1686 aa2.09□□□□□ -2.08
VPS26A-206ENST00000489794 TRAV5A0A0B4J249 113 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 UBBP0CG47 229 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 RPL35P42766 123 aaKnown RBP2.08□□□□□ -2.08
VPS26A-206ENST00000489794 ESRGQ1W209 222 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 VMA21Q3ZAQ7 101 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 RNASE10Q5GAN6 216 aaKnown RBP2.08□□□□□ -2.08
VPS26A-206ENST00000489794 PATE2Q6UY27 113 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 C4orf22Q6V702 233 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 C7orf65Q6ZTY9 151 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 OR8I2Q8N0Y5 310 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 TEX29Q8N6K0 151 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 OR4K15Q8NH41 348 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 ZNF418Q8TF45 676 aaPredicted RBP2.08□□□□□ -2.08
VPS26A-206ENST00000489794 SLC50A1Q9BRV3 221 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 TTTY12Q9BZ98 90 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 SPANXCQ9NY87 97 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 COL4A2P08572 1712 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 STRCQ7RTU9 1775 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 OVOS2A0A0G2JMS6 1433 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 TRAPPC8Q9Y2L5 1435 aa2.08□□□□□ -2.08
VPS26A-206ENST00000489794 MYO5AQ9Y4I1 1855 aaKnown RBP2.07□□□□□ -2.08
VPS26A-206ENST00000489794 BORCS7-ASMTA0A0B4J1R7 106 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 TMEM189A5PLL7 270 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 A8MWV9 139 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 RER1O15258 196 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 IFNA4P05014 189 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 CMPK1P30085 196 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 SDC4P31431 198 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 NDUFA6P56556 154 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 SMIM21Q3B7S5 101 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 SPANXN5Q5MJ07 72 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 PHF5AQ7RTV0 110 aaKnown RBP2.07□□□□□ -2.08
VPS26A-206ENST00000489794 LINC00471Q8N535 108 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 LINC00301Q8NCQ3 95 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 OR5D16Q8NGK9 328 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 LHFPL6Q9Y693 200 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 RTEL1-TNFRSF6BF6WH68 1400 aa2.07□□□□□ -2.08
VPS26A-206ENST00000489794 GLI3P10071 1580 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 SMARCA4P51532 1647 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 STRCP1A6NGW2 1772 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 VIRMAQ69YN4 1812 aaKnown RBP2.06□□□□□ -2.08
VPS26A-206ENST00000489794 TAF1LQ8IZX4 1826 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 IGHV1-58A0A0C4DH39 117 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 LOC107984640A0A0U1RRK4 108 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 H3BRN7 92 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 M0QZK8 103 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 ZNF737O75373 536 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 MT-ND6P03923 174 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 ZNF705BP0CI00 300 aaPredicted RBP2.06□□□□□ -2.08
VPS26A-206ENST00000489794 GPX2P18283 190 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 AKR1C3P42330 323 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 PSG9Q00887 426 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 KLRD1Q13241 179 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 LINC00305Q7Z4B0 112 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 Q8IYB0 196 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 C9orf163Q8N9P6 203 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 SPACA4Q8TDM5 124 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 TCEAL4Q96EI5 215 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 RETNLBQ9BQ08 111 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 LINC00467Q9BRT7 94 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 LXNQ9BS40 222 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 CST9LQ9H4G1 147 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 PXDNLA1KZ92 1463 aa2.06□□□□□ -2.08
VPS26A-206ENST00000489794 DOCK10Q96BY6 2186 aa2.05□□□□□ -2.08
VPS26A-206ENST00000489794 A0A1B0GW64 132 aa2.05□□□□□ -2.08
VPS26A-206ENST00000489794 C9JAW5 83 aa2.05□□□□□ -2.08
VPS26A-206ENST00000489794 TNFSF15O95150 251 aa2.05□□□□□ -2.08
VPS26A-206ENST00000489794 C1QCP02747 245 aa2.05□□□□□ -2.08
VPS26A-206ENST00000489794 DBIP07108 87 aaKnown RBP2.05□□□□□ -2.08
VPS26A-206ENST00000489794 ASAH2BP0C7U1 165 aa2.05□□□□□ -2.08
VPS26A-206ENST00000489794 RNASE11Q8TAA1 199 aaKnown RBP2.05□□□□□ -2.08
VPS26A-206ENST00000489794 HSPB8Q9UJY1 196 aa2.05□□□□□ -2.08
VPS26A-206ENST00000489794 HIGD1AQ9Y241 93 aa2.05□□□□□ -2.08
VPS26A-206ENST00000489794 A2MP01023 1474 aa2.05□□□□□ -2.08
VPS26A-206ENST00000489794 ADGRB3O60242 1522 aa2.05□□□□□ -2.08
VPS26A-206ENST00000489794 TRPM1Q7Z4N2 1603 aa2.05□□□□□ -2.08
VPS26A-206ENST00000489794 FER1L6Q2WGJ9 1857 aa2.05□□□□□ -2.08
VPS26A-206ENST00000489794 ZFHX2Q9C0A1 2572 aaPredicted RBP2.04□□□□□ -2.08
VPS26A-206ENST00000489794 TRBV7-6A0A0J9YX20 115 aa2.04□□□□□ -2.08
VPS26A-206ENST00000489794 DPM2O94777 84 aa2.04□□□□□ -2.08
VPS26A-206ENST00000489794 OR2H2O95918 312 aa2.04□□□□□ -2.08
VPS26A-206ENST00000489794 SSR2P43308 183 aa2.04□□□□□ -2.08
VPS26A-206ENST00000489794 ZNF846Q147U1 533 aa2.04□□□□□ -2.08
VPS26A-206ENST00000489794 CCDC58Q4VC31 144 aa2.04□□□□□ -2.08
VPS26A-206ENST00000489794 TCTE3Q8IZS6 198 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms