RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 CITED4Q96RK1 184 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 TXNDC17Q9BRA2 123 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 EIF5A2Q9GZV4 153 aaKnown RBP10.84□□□□□ -0.67
VPS26A-205ENST00000489656 VAX2Q9UIW0 290 aa10.84□□□□□ -0.67
VPS26A-205ENST00000489656 TSSC4Q9Y5U2 329 aaPredicted RBP10.84□□□□□ -0.67
VPS26A-205ENST00000489656 A8MWP6 167 aa10.83□□□□□ -0.68
VPS26A-205ENST00000489656 LGALS9O00182 355 aa10.83□□□□□ -0.68
VPS26A-205ENST00000489656 BUB3O43684 328 aa10.83□□□□□ -0.68
VPS26A-205ENST00000489656 RPL7P18124 248 aaKnown RBP10.83□□□□□ -0.68
VPS26A-205ENST00000489656 NPPCP23582 126 aa10.83□□□□□ -0.68
VPS26A-205ENST00000489656 SRSF3P84103 164 aaKnown RBP10.83□□□□□ -0.68
VPS26A-205ENST00000489656 SRSF2Q01130 221 aaKnown RBP10.83□□□□□ -0.68
VPS26A-205ENST00000489656 LEMD1Q68G75 181 aa10.83□□□□□ -0.68
VPS26A-205ENST00000489656 C18orf65Q6ZTR6 163 aa10.83□□□□□ -0.68
VPS26A-205ENST00000489656 KLHL30-AS1Q8NEE0 82 aa10.83□□□□□ -0.68
VPS26A-205ENST00000489656 GPR82Q96P67 336 aa10.83□□□□□ -0.68
VPS26A-205ENST00000489656 RARRES2Q99969 163 aa10.83□□□□□ -0.68
VPS26A-205ENST00000489656 C20orf24Q9BUV8 137 aa10.83□□□□□ -0.68
VPS26A-205ENST00000489656 IGHV3OR16-8A0A075B7F1 116 aa10.82□□□□□ -0.68
VPS26A-205ENST00000489656 A0A1W2PRE2 83 aa10.82□□□□□ -0.68
VPS26A-205ENST00000489656 LINC01619G3V211 115 aa10.82□□□□□ -0.68
VPS26A-205ENST00000489656 PAGE4O60829 102 aa10.82□□□□□ -0.68
VPS26A-205ENST00000489656 OR10J4P0C629 311 aa10.82□□□□□ -0.68
VPS26A-205ENST00000489656 IGLC2P0DOY2 106 aa10.82□□□□□ -0.68
VPS26A-205ENST00000489656 PYYP10082 97 aa10.82□□□□□ -0.68
VPS26A-205ENST00000489656 HIST1H1EP10412 219 aaKnown RBP10.82□□□□□ -0.68
VPS26A-205ENST00000489656 HOXD3P31249 432 aaPredicted RBP10.82□□□□□ -0.68
VPS26A-205ENST00000489656 MEF2BQ02080 365 aaPredicted RBP10.82□□□□□ -0.68
VPS26A-205ENST00000489656 FOXL1Q12952 345 aa10.82□□□□□ -0.68
VPS26A-205ENST00000489656 KHDC1LQ5JSQ8 128 aa10.82□□□□□ -0.68
VPS26A-205ENST00000489656 C1QL4Q86Z23 238 aa10.82□□□□□ -0.68
VPS26A-205ENST00000489656 CITED2Q99967 270 aaPredicted RBP10.82□□□□□ -0.68
VPS26A-205ENST00000489656 DAZ1Q9NQZ3 744 aaKnown RBP10.82□□□□□ -0.68
VPS26A-205ENST00000489656 UFC1Q9Y3C8 167 aa10.82□□□□□ -0.68
VPS26A-205ENST00000489656 FAM74A7A6NL05 159 aa10.81□□□□□ -0.68
VPS26A-205ENST00000489656 NBEAP1P0C6P0 100 aa10.81□□□□□ -0.68
VPS26A-205ENST00000489656 FHL3Q13643 280 aa10.81□□□□□ -0.68
VPS26A-205ENST00000489656 KLF5Q13887 457 aaPredicted RBP10.81□□□□□ -0.68
VPS26A-205ENST00000489656 C16orf54Q6UWD8 224 aa10.81□□□□□ -0.68
VPS26A-205ENST00000489656 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.81□□□□□ -0.68
VPS26A-205ENST00000489656 OR4F17Q8NGA8 305 aa10.81□□□□□ -0.68
VPS26A-205ENST00000489656 OR1N2Q8NGR9 330 aa10.81□□□□□ -0.68
VPS26A-205ENST00000489656 NARS2Q96I59 477 aaKnown RBP10.81□□□□□ -0.68
VPS26A-205ENST00000489656 OR4F4Q96R69 305 aa10.81□□□□□ -0.68
VPS26A-205ENST00000489656 NKX6-2Q9C056 277 aaPredicted RBP10.81□□□□□ -0.68
VPS26A-205ENST00000489656 TMEM231Q9H6L2 316 aa10.81□□□□□ -0.68
VPS26A-205ENST00000489656 TREM1Q9NP99 234 aa10.81□□□□□ -0.68
VPS26A-205ENST00000489656 IGHV7-4-1A0A0J9YVY3 117 aa10.8□□□□□ -0.68
VPS26A-205ENST00000489656 A0A1W2PS18 150 aa10.8□□□□□ -0.68
VPS26A-205ENST00000489656 C9JQL5 133 aa10.8□□□□□ -0.68
VPS26A-205ENST00000489656 SRP19P09132 144 aaKnown RBP10.8□□□□□ -0.68
VPS26A-205ENST00000489656 CD81P60033 236 aa10.8□□□□□ -0.68
VPS26A-205ENST00000489656 PDE6HQ13956 83 aa10.8□□□□□ -0.68
VPS26A-205ENST00000489656 OR8I2Q8N0Y5 310 aa10.8□□□□□ -0.68
VPS26A-205ENST00000489656 LINC00528Q8N1L1 170 aa10.8□□□□□ -0.68
VPS26A-205ENST00000489656 OR11H1Q8NG94 326 aa10.8□□□□□ -0.68
VPS26A-205ENST00000489656 RXFP4Q8TDU9 374 aa10.8□□□□□ -0.68
VPS26A-205ENST00000489656 DPF1Q92782 380 aa10.8□□□□□ -0.68
VPS26A-205ENST00000489656 ZNF586Q9NXT0 402 aa10.8□□□□□ -0.68
VPS26A-205ENST00000489656 YTHDF2Q9Y5A9 579 aaKnown RBP10.8□□□□□ -0.68
VPS26A-205ENST00000489656 JMJD1CQ15652 2540 aa10.8□□□□□ -0.68
VPS26A-205ENST00000489656 A0A087X0K7 114 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 ZNF320A2RRD8 509 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 TMEM218A2RU14 115 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 ADARB2-AS1A8MUL3 147 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 KRBOX1C9JBD0 128 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 C11orf94C9JXX5 98 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 TMEM250H0YL14 139 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 H3BQ15 152 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 ZNF207O43670 478 aaKnown RBP10.79□□□□□ -0.68
VPS26A-205ENST00000489656 APOHP02749 345 aaPredicted RBP10.79□□□□□ -0.68
VPS26A-205ENST00000489656 S100A1P23297 94 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 UBE2G2P60604 165 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 DEFB136Q30KP8 78 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 C8orf86Q6ZUL3 223 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 CCDC28AQ8IWP9 274 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 GLMPQ8WWB7 406 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 GRAMD2BQ96HH9 432 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 ELOVL1Q9BW60 279 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 SLC35B3Q9H1N7 401 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 WNK1Q9H4A3 2382 aa10.79□□□□□ -0.68
VPS26A-205ENST00000489656 TRBV19A0A075B6N1 114 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 TMEM213A2RRL7 107 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 F6UZH7 168 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 PDE6DO43924 150 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 ZNF253O75346 499 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 BMI1P35226 326 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 MYCNOSP40205 109 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 GALR1P47211 349 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 ATP5G3P48201 142 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 MEOX2P50222 304 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 SYNJ2BPP57105 145 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 KRTAP10-3P60369 221 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 TM4SF20Q53R12 229 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 C10orf91Q5T1B1 145 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 CST9LP1Q5W188 147 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 NDUFA11Q86Y39 141 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 LYPD1Q8N2G4 141 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 C11orf44Q8N8P7 122 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 RAX2Q96IS3 184 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms