RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 DNAH9Q9NYC9 4486 aa6.18□□□□□ -1.42
SF1-218ENST00000489544 HELTA6NFD8 242 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 HMSDA8MTL9 139 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 OR11H12B2RN74 326 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 H3BTX0 84 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 K7EQG2 157 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 DNASE2O00115 360 aaPredicted RBP6.17□□□□□ -1.42
SF1-218ENST00000489544 MPDU1O75352 247 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 ATP6V0CP27449 155 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 DEFB1P60022 68 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 FFAR4Q5NUL3 377 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 MIR17HGQ75NE6 70 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 GTSCR1Q86UQ5 136 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 APRG1Q8IVJ8 170 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 KCNRGQ8N5I3 272 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 DCANP1Q8TF63 244 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 CITED4Q96RK1 184 aa6.17□□□□□ -1.42
SF1-218ENST00000489544 SEPSECSQ9HD40 501 aaKnown RBP6.17□□□□□ -1.42
SF1-218ENST00000489544 ZMAT5Q9UDW3 170 aaKnown RBP6.17□□□□□ -1.42
SF1-218ENST00000489544 PRKDCP78527 4128 aaKnown RBP6.17□□□□□ -1.42
SF1-218ENST00000489544 ELOA3CA0A087WX78 387 aaPredicted RBP6.16□□□□□ -1.42
SF1-218ENST00000489544 OR4C46A6NHA9 309 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 C17orf112F2Z3M2 114 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 MRPS12O15235 138 aaKnown RBP6.16□□□□□ -1.42
SF1-218ENST00000489544 ZNF688P0C7X2 276 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 IGHV4-30-4P0DP06 118 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 DEFB131AP59861 70 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 RAB2AP61019 212 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 PAFAH1B2P68402 229 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 ZNF266Q14584 549 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 LGALSLQ3ZCW2 172 aaPredicted RBP6.16□□□□□ -1.42
SF1-218ENST00000489544 C1orf194Q5T5A4 169 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 PXDC1Q5TGL8 231 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 FAM78BQ5VT40 261 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 IGFL4Q6B9Z1 124 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 OR1L4Q8NGR5 311 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 PARD6GQ9BYG4 376 aaPredicted RBP6.16□□□□□ -1.42
SF1-218ENST00000489544 MAP6D1Q9H9H5 199 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 NRN1Q9NPD7 142 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 PFDN2Q9UHV9 154 aa6.16□□□□□ -1.42
SF1-218ENST00000489544 H3BQ15 152 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 SOCS3O14543 225 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 HMGB3O15347 200 aaKnown RBP6.15□□□□□ -1.42
SF1-218ENST00000489544 C1QBP02746 253 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 CD5P06127 495 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 PYYP10082 97 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 HLA-DMBP28068 263 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 GALR1P47211 349 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 NKX2-5P52952 324 aaPredicted RBP6.15□□□□□ -1.42
SF1-218ENST00000489544 ZNF345Q14585 488 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 TMUB2Q71RG4 321 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 GATAD1Q8WUU5 269 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 C20orf173Q96LM9 149 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 PFDN5Q99471 154 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 ASCL2Q99929 193 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 ARPC5LQ9BPX5 153 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 SLC25A2Q9BXI2 301 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 SRD5A3Q9H8P0 318 aa6.15□□□□□ -1.42
SF1-218ENST00000489544 BORCS7-ASMTA0A0B4J1R7 106 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 TRAV8-2A0A0B4J237 113 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 A0A0D9SG52 128 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 RBMY1BA6NDE4 496 aaKnown RBP6.14□□□□□ -1.43
SF1-218ENST00000489544 RBMY1EA6NEQ0 496 aaKnown RBP6.14□□□□□ -1.43
SF1-218ENST00000489544 KNCNA6PVL3 124 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 TAAR5O14804 337 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 BCL2L11O43521 198 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 RBMY1DP0C7P1 496 aaKnown RBP6.14□□□□□ -1.43
SF1-218ENST00000489544 FRMD6-AS1P0C7T7 363 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 RPL7P18124 248 aaKnown RBP6.14□□□□□ -1.43
SF1-218ENST00000489544 ATF4P18848 351 aaPredicted RBP6.14□□□□□ -1.43
SF1-218ENST00000489544 PSMG4Q5JS54 123 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 FAM122CQ6P4D5 195 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 RNF182Q8N6D2 247 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 ZNF503Q96F45 646 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 FAM167A-AS1Q96KT0 104 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 LINC00052Q96N35 136 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 ZNF471Q9BX82 626 aaPredicted RBP6.14□□□□□ -1.43
SF1-218ENST00000489544 TUBA4BQ9H853 241 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 KCNIP2Q9NS61 270 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 TIMM9Q9Y5J7 89 aa6.14□□□□□ -1.43
SF1-218ENST00000489544 HUWE1Q7Z6Z7 4374 aaKnown RBP6.13□□□□□ -1.43
SF1-218ENST00000489544 TRAV2A0A0B4J234 112 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 KANTRA0A1W2PQU2 76 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 F6UB75 175 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 SLC17A3O00476 420 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 PFDN1O60925 122 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 JTBO76095 146 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 IGLC2P0DOY2 106 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 RPL35AP18077 110 aaKnown RBP6.13□□□□□ -1.43
SF1-218ENST00000489544 M6PRP20645 277 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 S100A7P31151 101 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 ACOT6Q3I5F7 207 aaPredicted RBP6.13□□□□□ -1.43
SF1-218ENST00000489544 ZFP69Q49AA0 526 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 GDF5OSQ5U4N7 250 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 SSX7Q7RTT5 188 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 BPIFA4PQ86YQ2 179 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 SBSPONQ8IVN8 264 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 C9orf62Q8N4C0 152 aa6.13□□□□□ -1.43
SF1-218ENST00000489544 RPP25LQ8N5L8 163 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms