RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 HIST1H1EP10412 219 aaKnown RBP20.64■□□□□ 0.89
HOXB3-210ENST00000489475 UBE2E2Q96LR5 201 aa20.64■□□□□ 0.89
HOXB3-210ENST00000489475 RPUSD4Q96CM3 377 aaKnown RBP20.63■□□□□ 0.89
HOXB3-210ENST00000489475 CLPSL1A2RUU4 121 aa20.62■□□□□ 0.89
HOXB3-210ENST00000489475 GGTLC3B5MD39 225 aa20.62■□□□□ 0.89
HOXB3-210ENST00000489475 SNAPINO95295 136 aa20.62■□□□□ 0.89
HOXB3-210ENST00000489475 SUMO1P63165 101 aaKnown RBP20.62■□□□□ 0.89
HOXB3-210ENST00000489475 NIPSNAP3BQ9BS92 247 aa20.62■□□□□ 0.89
HOXB3-210ENST00000489475 NPPCP23582 126 aa20.62■□□□□ 0.89
HOXB3-210ENST00000489475 OR8I2Q8N0Y5 310 aa20.62■□□□□ 0.89
HOXB3-210ENST00000489475 RPL7P18124 248 aaKnown RBP20.61■□□□□ 0.89
HOXB3-210ENST00000489475 RANP62826 216 aaKnown RBP20.61■□□□□ 0.89
HOXB3-210ENST00000489475 ZNF674Q2M3X9 581 aa20.61■□□□□ 0.89
HOXB3-210ENST00000489475 SMIM7Q9BQ49 75 aa20.61■□□□□ 0.89
HOXB3-210ENST00000489475 ZNF727A8MUV8 499 aa20.6■□□□□ 0.89
HOXB3-210ENST00000489475 H3BQ15 152 aa20.6■□□□□ 0.89
HOXB3-210ENST00000489475 LGALS1P09382 135 aaKnown RBP20.6■□□□□ 0.89
HOXB3-210ENST00000489475 PARLQ9H300 379 aa20.6■□□□□ 0.89
HOXB3-210ENST00000489475 C16orf95Q9H693 158 aa20.6■□□□□ 0.89
HOXB3-210ENST00000489475 ZNF586Q9NXT0 402 aa20.6■□□□□ 0.89
HOXB3-210ENST00000489475 SCO2A0A1W2PP80 73 aa20.6■□□□□ 0.89
HOXB3-210ENST00000489475 NDUFB4O95168 129 aa20.6■□□□□ 0.89
HOXB3-210ENST00000489475 IGLC2P0DOY2 106 aa20.6■□□□□ 0.89
HOXB3-210ENST00000489475 FAM74A3Q4VXF1 159 aa20.6■□□□□ 0.89
HOXB3-210ENST00000489475 NF1P21359 2839 aa20.59■□□□□ 0.89
HOXB3-210ENST00000489475 NSD1Q96L73 2696 aaPredicted RBP20.59■□□□□ 0.89
HOXB3-210ENST00000489475 H3BTX0 84 aa20.59■□□□□ 0.89
HOXB3-210ENST00000489475 MRPS12O15235 138 aaKnown RBP20.59■□□□□ 0.89
HOXB3-210ENST00000489475 ZNF207O43670 478 aaKnown RBP20.59■□□□□ 0.89
HOXB3-210ENST00000489475 CRYBB3P26998 211 aa20.59■□□□□ 0.89
HOXB3-210ENST00000489475 UNQ9165/PRO28630Q6UXU0 137 aa20.59■□□□□ 0.89
HOXB3-210ENST00000489475 BUB3O43684 328 aa20.58■□□□□ 0.89
HOXB3-210ENST00000489475 ATRAIDQ6UW56 229 aa20.58■□□□□ 0.89
HOXB3-210ENST00000489475 CLRN3Q8NCR9 226 aa20.58■□□□□ 0.89
HOXB3-210ENST00000489475 ZNF320A2RRD8 509 aa20.57■□□□□ 0.88
HOXB3-210ENST00000489475 FAM106AQ4KMX7 169 aa20.57■□□□□ 0.88
HOXB3-210ENST00000489475 C11orf52Q96A22 123 aa20.57■□□□□ 0.88
HOXB3-210ENST00000489475 TRBV19A0A075B6N1 114 aa20.57■□□□□ 0.88
HOXB3-210ENST00000489475 M0R036 132 aa20.57■□□□□ 0.88
HOXB3-210ENST00000489475 CRLF1O75462 422 aa20.57■□□□□ 0.88
HOXB3-210ENST00000489475 SCO1O75880 301 aa20.57■□□□□ 0.88
HOXB3-210ENST00000489475 C1orf194Q5T5A4 169 aa20.57■□□□□ 0.88
HOXB3-210ENST00000489475 TMEM190Q8WZ59 177 aa20.57■□□□□ 0.88
HOXB3-210ENST00000489475 GPR82Q96P67 336 aa20.57■□□□□ 0.88
HOXB3-210ENST00000489475 ELOVL1Q9BW60 279 aa20.57■□□□□ 0.88
HOXB3-210ENST00000489475 TCF21O43680 179 aa20.56■□□□□ 0.88
HOXB3-210ENST00000489475 LINC01006Q8NI28 216 aa20.56■□□□□ 0.88
HOXB3-210ENST00000489475 TVP23CQ96ET8 276 aa20.56■□□□□ 0.88
HOXB3-210ENST00000489475 U3KQE9 123 aa20.56■□□□□ 0.88
HOXB3-210ENST00000489475 MYCNOSP40205 109 aa20.55■□□□□ 0.88
HOXB3-210ENST00000489475 RPEL1Q2QD12 228 aa20.55■□□□□ 0.88
HOXB3-210ENST00000489475 GPHB5Q86YW7 130 aa20.55■□□□□ 0.88
HOXB3-210ENST00000489475 Q9H3A6 140 aa20.55■□□□□ 0.88
HOXB3-210ENST00000489475 PGPA6NDG6 321 aa20.55■□□□□ 0.88
HOXB3-210ENST00000489475 CDX1P47902 265 aaPredicted RBP20.55■□□□□ 0.88
HOXB3-210ENST00000489475 TCTEX1D4Q5JR98 221 aa20.55■□□□□ 0.88
HOXB3-210ENST00000489475 TCEAL7Q9BRU2 100 aa20.55■□□□□ 0.88
HOXB3-210ENST00000489475 DERL1Q9BUN8 251 aa20.55■□□□□ 0.88
HOXB3-210ENST00000489475 IGHV3-49A0A0A0MS15 119 aa20.54■□□□□ 0.88
HOXB3-210ENST00000489475 IGHV3-66A0A0C4DH42 116 aa20.54■□□□□ 0.88
HOXB3-210ENST00000489475 NDUFA7O95182 113 aa20.54■□□□□ 0.88
HOXB3-210ENST00000489475 APOHP02749 345 aaPredicted RBP20.54■□□□□ 0.88
HOXB3-210ENST00000489475 TMEM241Q24JQ0 296 aa20.54■□□□□ 0.88
HOXB3-210ENST00000489475 KHDC1LQ5JSQ8 128 aa20.54■□□□□ 0.88
HOXB3-210ENST00000489475 C17orf77Q96MU5 243 aa20.54■□□□□ 0.88
HOXB3-210ENST00000489475 NAT8Q9UHE5 227 aa20.54■□□□□ 0.88
HOXB3-210ENST00000489475 IGHV3OR16-13A0A075B7E8 117 aa20.53■□□□□ 0.88
HOXB3-210ENST00000489475 IGHV3-74A0A0B4J1X5 117 aa20.53■□□□□ 0.88
HOXB3-210ENST00000489475 ATF4P18848 351 aaPredicted RBP20.53■□□□□ 0.88
HOXB3-210ENST00000489475 PDE6HQ13956 83 aa20.53■□□□□ 0.88
HOXB3-210ENST00000489475 AWAT1Q58HT5 328 aa20.53■□□□□ 0.88
HOXB3-210ENST00000489475 WIPF2Q8TF74 440 aaPredicted RBP20.53■□□□□ 0.88
HOXB3-210ENST00000489475 OTORQ9NRC9 128 aa20.53■□□□□ 0.88
HOXB3-210ENST00000489475 SETXQ7Z333 2677 aaKnown RBP20.53■□□□□ 0.88
HOXB3-210ENST00000489475 SLC25A5P05141 298 aaKnown RBP20.53■□□□□ 0.88
HOXB3-210ENST00000489475 GALR1P47211 349 aa20.53■□□□□ 0.88
HOXB3-210ENST00000489475 PNRC1Q12796 327 aaPredicted RBP20.53■□□□□ 0.88
HOXB3-210ENST00000489475 LYPD1Q8N2G4 141 aa20.53■□□□□ 0.88
HOXB3-210ENST00000489475 DAZ1Q9NQZ3 744 aaKnown RBP20.53■□□□□ 0.88
HOXB3-210ENST00000489475 CUBNO60494 3623 aa20.52■□□□□ 0.88
HOXB3-210ENST00000489475 FN1P02751 2386 aaKnown RBP20.52■□□□□ 0.88
HOXB3-210ENST00000489475 SDF2L1Q9HCN8 221 aa20.52■□□□□ 0.88
HOXB3-210ENST00000489475 C5orf17Q8NAS9 161 aa20.51■□□□□ 0.87
HOXB3-210ENST00000489475 C4orf3Q8WVX3 66 aa20.51■□□□□ 0.87
HOXB3-210ENST00000489475 SMAD5-AS1Q9Y6J3 95 aa20.51■□□□□ 0.87
HOXB3-210ENST00000489475 IGHV4OR15-8A0A075B7B6 117 aa20.5■□□□□ 0.87
HOXB3-210ENST00000489475 A0A087WW49 117 aa20.5■□□□□ 0.87
HOXB3-210ENST00000489475 A0A1W2PS18 150 aa20.5■□□□□ 0.87
HOXB3-210ENST00000489475 C2CD4CQ8TF44 421 aa20.5■□□□□ 0.87
HOXB3-210ENST00000489475 HIST1H2BAQ96A08 127 aa20.5■□□□□ 0.87
HOXB3-210ENST00000489475 EPDR1Q9UM22 224 aa20.5■□□□□ 0.87
HOXB3-210ENST00000489475 ZNF785A8K8V0 405 aa20.5■□□□□ 0.87
HOXB3-210ENST00000489475 K7EMT4 169 aa20.5■□□□□ 0.87
HOXB3-210ENST00000489475 RPL35P42766 123 aaKnown RBP20.5■□□□□ 0.87
HOXB3-210ENST00000489475 RHEBQ15382 184 aa20.5■□□□□ 0.87
HOXB3-210ENST00000489475 GRAMD2BQ96HH9 432 aa20.5■□□□□ 0.87
HOXB3-210ENST00000489475 UFC1Q9Y3C8 167 aa20.5■□□□□ 0.87
HOXB3-210ENST00000489475 F8P00451 2351 aa20.5■□□□□ 0.87
HOXB3-210ENST00000489475 HELTA6NFD8 242 aa20.49■□□□□ 0.87
HOXB3-210ENST00000489475 SLC17A3O00476 420 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 1835.9 ms