RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 ZNF414Q96IQ9 312 aa4.32□□□□□ -1.72
ATG4A-208ENST00000489247 BTF3L4Q96K17 158 aa4.32□□□□□ -1.72
ATG4A-208ENST00000489247 IGF2BP2-AS1Q96M15 143 aa4.32□□□□□ -1.72
ATG4A-208ENST00000489247 RASL11BQ9BPW5 248 aa4.32□□□□□ -1.72
ATG4A-208ENST00000489247 SHANK2-AS3Q9BTD1 123 aa4.32□□□□□ -1.72
ATG4A-208ENST00000489247 PAXXQ9BUH6 204 aa4.32□□□□□ -1.72
ATG4A-208ENST00000489247 C11orf21Q9P2W6 132 aa4.32□□□□□ -1.72
ATG4A-208ENST00000489247 RNF24Q9Y225 148 aa4.32□□□□□ -1.72
ATG4A-208ENST00000489247 HIGD1AQ9Y241 93 aa4.32□□□□□ -1.72
ATG4A-208ENST00000489247 MOB4Q9Y3A3 225 aa4.32□□□□□ -1.72
ATG4A-208ENST00000489247 KLF12Q9Y4X4 402 aa4.32□□□□□ -1.72
ATG4A-208ENST00000489247 DOCK11Q5JSL3 2073 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 MYO18BQ8IUG5 2567 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 YLPM1P49750 1951 aaKnown RBP4.31□□□□□ -1.72
ATG4A-208ENST00000489247 COL12A1Q99715 3063 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 SPTAN1Q13813 2472 aaKnown RBP4.31□□□□□ -1.72
ATG4A-208ENST00000489247 TRAV5A0A0B4J249 113 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 NCBP2LA6PVI3 153 aaKnown RBP4.31□□□□□ -1.72
ATG4A-208ENST00000489247 H3BUA1 57 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 H7BYZ3 331 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 M0QZK8 103 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 MRPS12O15235 138 aaKnown RBP4.31□□□□□ -1.72
ATG4A-208ENST00000489247 SCGB2A1O75556 95 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 NDUFB8O95169 186 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 S100A9P06702 114 aaKnown RBP4.31□□□□□ -1.72
ATG4A-208ENST00000489247 CXCL1P09341 107 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 RD3LP0DJH9 198 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 HIST1H1EP10412 219 aaKnown RBP4.31□□□□□ -1.72
ATG4A-208ENST00000489247 RPL35P42766 123 aaKnown RBP4.31□□□□□ -1.72
ATG4A-208ENST00000489247 ADIRFQ15847 76 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 CLEC12BQ2HXU8 276 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 ZNF674Q2M3X9 581 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 TIGITQ495A1 244 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 KLF17Q5JT82 389 aaPredicted RBP4.31□□□□□ -1.72
ATG4A-208ENST00000489247 DGAT2L7PQ6IED9 249 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 TEX38Q6PEX7 206 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 ZNF329Q86UD4 541 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 LYPD1Q8N2G4 141 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 ZNF491Q8N8L2 437 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 ZNF502Q8TBZ5 544 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 HSPB9Q9BQS6 159 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 FAM103A1Q9BTL3 118 aaKnown RBP4.31□□□□□ -1.72
ATG4A-208ENST00000489247 DERL1Q9BUN8 251 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 ELOVL1Q9BW60 279 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 SLC25A39Q9BZJ4 359 aaPredicted RBP4.31□□□□□ -1.72
ATG4A-208ENST00000489247 SRD5A3Q9H8P0 318 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 OSTCQ9NRP0 149 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 GAR1Q9NY12 217 aaKnown RBP4.31□□□□□ -1.72
ATG4A-208ENST00000489247 C21orf62Q9NYP8 219 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 MLXQ9UH92 298 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 NAV3Q8IVL0 2385 aa4.31□□□□□ -1.72
ATG4A-208ENST00000489247 FLNCQ14315 2725 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 LRRK2Q5S007 2527 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 TRAV40A0A0B4J280 105 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 A0A0U1RQK1 487 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 HELTA6NFD8 242 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 C5orf52A6NGY3 159 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 FAM223BA6NKX1 122 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 K7EN84 100 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 ISLRO14498 428 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 ATP6V0E1O15342 81 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 GCGP01275 180 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 IGLV2-8P01709 118 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 IGHV3-48P01763 117 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 IGHG2P01859 326 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 CTSGP08311 255 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 NBEAP1P0C6P0 100 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 APELAP0DMC3 54 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 IGLC2P0DOY2 106 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 IGHV4-38-2P0DP08 117 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 PYYP10082 97 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 ORM2P19652 201 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 CRYBB3P26998 211 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 S100A7P31151 101 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 PDE6HQ13956 83 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 TMEM183BQ1AE95 376 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 DEFB113Q30KQ7 82 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 ZNF600Q6ZNG1 722 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 FAM231DQ6ZW35 169 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 FAM223AQ8IWN6 122 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 C5orf17Q8NAS9 161 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 NECAP1Q8NC96 275 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 OR1B1Q8NGR6 318 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 OCC1Q8TAD7 63 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 RNF125Q96EQ8 232 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 SFRP2Q96HF1 295 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 FAM210BQ96KR6 192 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 OR5B12Q96R08 314 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 BIN3Q9NQY0 253 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 OTORQ9NRC9 128 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 HIF1ANQ9NWT6 349 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 PITPNC1Q9UKF7 332 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 EPDR1Q9UM22 224 aa4.3□□□□□ -1.72
ATG4A-208ENST00000489247 DCHS2Q6V1P9 2916 aa4.29□□□□□ -1.72
ATG4A-208ENST00000489247 TRBV19A0A075B6N1 114 aa4.29□□□□□ -1.72
ATG4A-208ENST00000489247 TRBV7-1A0A0A6YYK4 115 aa4.29□□□□□ -1.72
ATG4A-208ENST00000489247 TGIF2-C20orf24A0A0A6YYL0 155 aa4.29□□□□□ -1.72
ATG4A-208ENST00000489247 MDFIC2A0A1B0GVS7 189 aa4.29□□□□□ -1.72
ATG4A-208ENST00000489247 TMEM89A2RUT3 159 aa4.29□□□□□ -1.72
ATG4A-208ENST00000489247 PEX7O00628 323 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms