RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TMEM268Q5VZI3 342 aa11.08□□□□□ -0.64
USP48-210ENST00000489108 ZNF493Q6ZR52 646 aa11.08□□□□□ -0.64
USP48-210ENST00000489108 RNASE8Q8TDE3 154 aaKnown RBP11.08□□□□□ -0.64
USP48-210ENST00000489108 H3BNG1 76 aa11.07□□□□□ -0.64
USP48-210ENST00000489108 DNAH10OSP0CZ25 163 aa11.07□□□□□ -0.64
USP48-210ENST00000489108 SULT1A3P0DMM9 295 aa11.07□□□□□ -0.64
USP48-210ENST00000489108 SULT1A4P0DMN0 295 aa11.07□□□□□ -0.64
USP48-210ENST00000489108 FGL1Q08830 312 aa11.07□□□□□ -0.64
USP48-210ENST00000489108 Q6ZSN1 163 aa11.07□□□□□ -0.64
USP48-210ENST00000489108 LINC00612Q8N6U2 182 aa11.07□□□□□ -0.64
USP48-210ENST00000489108 DTD1Q8TEA8 209 aa11.07□□□□□ -0.64
USP48-210ENST00000489108 TRGV9Q99603 122 aa11.07□□□□□ -0.64
USP48-210ENST00000489108 RTBDNQ9BSG5 229 aaPredicted RBP11.07□□□□□ -0.64
USP48-210ENST00000489108 RBKSQ9H477 322 aa11.07□□□□□ -0.64
USP48-210ENST00000489108 NAA60Q9H7X0 242 aa11.07□□□□□ -0.64
USP48-210ENST00000489108 PPP1R14DQ9NXH3 145 aa11.07□□□□□ -0.64
USP48-210ENST00000489108 UBR4Q5T4S7 5183 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 IGKV1OR2-108A0A075B7D4 117 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 A0A087WTM6 91 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 GAGE12BA1L429 117 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 SIVA1O15304 175 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 GAGE7O76087 117 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 TNFAIP8O95379 198 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 GAGE12IP0CL82 117 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 PRB4P10163 310 aaPredicted RBP11.06□□□□□ -0.64
USP48-210ENST00000489108 HIST1H1AQ02539 215 aaPredicted RBP11.06□□□□□ -0.64
USP48-210ENST00000489108 ZNF738Q8NE65 137 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 OR1B1Q8NGR6 318 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 OR52I2Q8NH67 350 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 TMEM263Q8WUH6 116 aaKnown RBP11.06□□□□□ -0.64
USP48-210ENST00000489108 CACFD1Q9UGQ2 172 aa11.06□□□□□ -0.64
USP48-210ENST00000489108 A0A096LPF7 62 aa11.05□□□□□ -0.64
USP48-210ENST00000489108 HPGDSO60760 199 aa11.05□□□□□ -0.64
USP48-210ENST00000489108 ADAP1O75689 374 aa11.05□□□□□ -0.64
USP48-210ENST00000489108 OR4D5Q8NGN0 318 aa11.05□□□□□ -0.64
USP48-210ENST00000489108 HSPB7Q9UBY9 170 aa11.05□□□□□ -0.64
USP48-210ENST00000489108 ORM2P19652 201 aa11.04□□□□□ -0.64
USP48-210ENST00000489108 TBPP20226 339 aa11.04□□□□□ -0.64
USP48-210ENST00000489108 GCSHP23434 173 aa11.04□□□□□ -0.64
USP48-210ENST00000489108 GGNBP1Q5YKI7 109 aa11.04□□□□□ -0.64
USP48-210ENST00000489108 OR8A1Q8NGG7 326 aa11.04□□□□□ -0.64
USP48-210ENST00000489108 VSIG2Q96IQ7 327 aa11.04□□□□□ -0.64
USP48-210ENST00000489108 MTFP1Q9UDX5 166 aa11.04□□□□□ -0.64
USP48-210ENST00000489108 C14orf166Q9Y224 244 aaKnown RBP11.04□□□□□ -0.64
USP48-210ENST00000489108 TMEM56-RWDD3S4R434 201 aa11.04□□□□□ -0.64
USP48-210ENST00000489108 RAB3DO95716 219 aa11.03□□□□□ -0.64
USP48-210ENST00000489108 GATA2P23769 480 aaPredicted RBP11.03□□□□□ -0.64
USP48-210ENST00000489108 ATP5IP56385 69 aaPredicted RBP11.03□□□□□ -0.64
USP48-210ENST00000489108 TMEM182Q6ZP80 229 aaPredicted RBP11.03□□□□□ -0.64
USP48-210ENST00000489108 THAP8Q8NA92 274 aa11.03□□□□□ -0.64
USP48-210ENST00000489108 GPR82Q96P67 336 aa11.03□□□□□ -0.64
USP48-210ENST00000489108 PRR13Q9NZ81 148 aa11.03□□□□□ -0.64
USP48-210ENST00000489108 SLC45A2Q9UMX9 530 aa11.03□□□□□ -0.64
USP48-210ENST00000489108 CRYM-AS1A6NIL9 109 aa11.02□□□□□ -0.65
USP48-210ENST00000489108 H7BYZ3 331 aa11.02□□□□□ -0.65
USP48-210ENST00000489108 CFDP00746 253 aaPredicted RBP11.02□□□□□ -0.65
USP48-210ENST00000489108 RLN2P04090 185 aa11.02□□□□□ -0.65
USP48-210ENST00000489108 CDKN1BP46527 198 aa11.02□□□□□ -0.65
USP48-210ENST00000489108 KIR3DS1Q14943 382 aa11.02□□□□□ -0.65
USP48-210ENST00000489108 TMEM229BQ8NBD8 167 aa11.02□□□□□ -0.65
USP48-210ENST00000489108 NXPH4O95158 308 aa11.01□□□□□ -0.65
USP48-210ENST00000489108 CCR6P51684 374 aa11.01□□□□□ -0.65
USP48-210ENST00000489108 SMCO1Q147U7 214 aa11.01□□□□□ -0.65
USP48-210ENST00000489108 GPR107Q5VW38 600 aa11.01□□□□□ -0.65
USP48-210ENST00000489108 FAAP20Q6NZ36 180 aa11.01□□□□□ -0.65
USP48-210ENST00000489108 STEAP1BQ6NZ63 245 aa11.01□□□□□ -0.65
USP48-210ENST00000489108 TMED4Q7Z7H5 227 aa11.01□□□□□ -0.65
USP48-210ENST00000489108 CCDC28AQ8IWP9 274 aa11.01□□□□□ -0.65
USP48-210ENST00000489108 TMPRSS5Q9H3S3 457 aa11.01□□□□□ -0.65
USP48-210ENST00000489108 FAM25AB3EWG3 89 aa11□□□□□ -0.65
USP48-210ENST00000489108 FAM25CB3EWG5 89 aa11□□□□□ -0.65
USP48-210ENST00000489108 FAM25GB3EWG6 89 aa11□□□□□ -0.65
USP48-210ENST00000489108 CXCL3P19876 107 aa11□□□□□ -0.65
USP48-210ENST00000489108 PSG3Q16557 428 aa11□□□□□ -0.65
USP48-210ENST00000489108 NFE4Q86UQ8 179 aa11□□□□□ -0.65
USP48-210ENST00000489108 YIPF6Q96EC8 236 aa11□□□□□ -0.65
USP48-210ENST00000489108 TMEM147Q9BVK8 224 aa11□□□□□ -0.65
USP48-210ENST00000489108 PAIP2BQ9ULR5 123 aaKnown RBP11□□□□□ -0.65
USP48-210ENST00000489108 GPR132Q9UNW8 380 aa11□□□□□ -0.65
USP48-210ENST00000489108 KRTAP29-1A8MX34 341 aaPredicted RBP10.99□□□□□ -0.65
USP48-210ENST00000489108 SNURFLB1AK76 121 aa10.99□□□□□ -0.65
USP48-210ENST00000489108 TAS2R19P59542 299 aa10.99□□□□□ -0.65
USP48-210ENST00000489108 Q6ZTI0 123 aa10.99□□□□□ -0.65
USP48-210ENST00000489108 LYZL2Q7Z4W2 148 aa10.99□□□□□ -0.65
USP48-210ENST00000489108 BPIFCQ8NFQ6 507 aa10.99□□□□□ -0.65
USP48-210ENST00000489108 IL22RA2Q969J5 263 aa10.99□□□□□ -0.65
USP48-210ENST00000489108 PARD6GQ9BYG4 376 aaPredicted RBP10.99□□□□□ -0.65
USP48-210ENST00000489108 RAB11AP62491 216 aa10.98□□□□□ -0.65
USP48-210ENST00000489108 C20orf144Q9BQM9 153 aa10.98□□□□□ -0.65
USP48-210ENST00000489108 HMCN2Q8NDA2 5059 aa10.97□□□□□ -0.65
USP48-210ENST00000489108 H3BRN7 92 aa10.97□□□□□ -0.65
USP48-210ENST00000489108 IAPPP10997 89 aa10.97□□□□□ -0.65
USP48-210ENST00000489108 S100A7P31151 101 aa10.97□□□□□ -0.65
USP48-210ENST00000489108 SURF2Q15527 256 aaPredicted RBP10.97□□□□□ -0.65
USP48-210ENST00000489108 SERTAD4-AS1Q5TG53 156 aa10.97□□□□□ -0.65
USP48-210ENST00000489108 OR1S1Q8NH92 325 aa10.97□□□□□ -0.65
USP48-210ENST00000489108 RPUSD4Q96CM3 377 aaKnown RBP10.97□□□□□ -0.65
USP48-210ENST00000489108 Q9H521 79 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 349.3 ms