RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 HBE1P02100 147 aa12.17□□□□□ -0.46
CLDN11-208ENST00000488989 C16orf54Q6UWD8 224 aa12.17□□□□□ -0.46
CLDN11-208ENST00000488989 LCN15Q6UWW0 184 aa12.17□□□□□ -0.46
CLDN11-208ENST00000488989 IL34Q6ZMJ4 242 aa12.17□□□□□ -0.46
CLDN11-208ENST00000488989 C3orf56Q8N813 242 aa12.17□□□□□ -0.46
CLDN11-208ENST00000488989 STXBP6Q8NFX7 210 aa12.17□□□□□ -0.46
CLDN11-208ENST00000488989 SUN5Q8TC36 379 aa12.17□□□□□ -0.46
CLDN11-208ENST00000488989 NARS2Q96I59 477 aaKnown RBP12.17□□□□□ -0.46
CLDN11-208ENST00000488989 OVOL1O14753 267 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 CHEK1O14757 476 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 HMGB3O15347 200 aaKnown RBP12.16□□□□□ -0.46
CLDN11-208ENST00000488989 CXorf1O96002 111 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 GP9P14770 177 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 RIPPLY3P57055 190 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 RAB14P61106 215 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 LEMD1Q68G75 181 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 ADAMTSL5Q6ZMM2 481 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 LINC00482Q8N8I6 264 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 SFT2D1Q8WV19 159 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 GLMPQ8WWB7 406 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 GPR82Q96P67 336 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 TMEM231Q9H6L2 316 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 SIGLEC8Q9NYZ4 499 aa12.16□□□□□ -0.46
CLDN11-208ENST00000488989 TEX46H3BTG2 121 aa12.15□□□□□ -0.46
CLDN11-208ENST00000488989 CSN3P07498 182 aa12.15□□□□□ -0.46
CLDN11-208ENST00000488989 ARL14EPLP0DKL9 152 aa12.15□□□□□ -0.46
CLDN11-208ENST00000488989 RPL7P18124 248 aaKnown RBP12.15□□□□□ -0.46
CLDN11-208ENST00000488989 EDN2P20800 178 aa12.15□□□□□ -0.46
CLDN11-208ENST00000488989 CBLN1P23435 193 aa12.15□□□□□ -0.46
CLDN11-208ENST00000488989 BMI1P35226 326 aa12.15□□□□□ -0.46
CLDN11-208ENST00000488989 PMS2P11Q13670 270 aa12.15□□□□□ -0.46
CLDN11-208ENST00000488989 BPIFA4PQ86YQ2 179 aa12.15□□□□□ -0.46
CLDN11-208ENST00000488989 PCNPQ8WW12 178 aaKnown RBP12.15□□□□□ -0.46
CLDN11-208ENST00000488989 RHPN1-AS1Q9BWJ2 59 aa12.15□□□□□ -0.46
CLDN11-208ENST00000488989 OR51M1Q9H341 326 aa12.15□□□□□ -0.46
CLDN11-208ENST00000488989 STAB1Q9NY15 2570 aa12.14□□□□□ -0.47
CLDN11-208ENST00000488989 IGHV3-49A0A0A0MS15 119 aa12.14□□□□□ -0.47
CLDN11-208ENST00000488989 PF4P02776 101 aa12.14□□□□□ -0.47
CLDN11-208ENST00000488989 FOLR2P14207 255 aa12.14□□□□□ -0.47
CLDN11-208ENST00000488989 GCHFRP30047 84 aa12.14□□□□□ -0.47
CLDN11-208ENST00000488989 FGF8P55075 233 aaPredicted RBP12.14□□□□□ -0.47
CLDN11-208ENST00000488989 OR8I2Q8N0Y5 310 aa12.14□□□□□ -0.47
CLDN11-208ENST00000488989 FXYD5Q96DB9 178 aa12.14□□□□□ -0.47
CLDN11-208ENST00000488989 GRAMD2BQ96HH9 432 aa12.14□□□□□ -0.47
CLDN11-208ENST00000488989 PAXXQ9BUH6 204 aa12.14□□□□□ -0.47
CLDN11-208ENST00000488989 ELOVL1Q9BW60 279 aa12.14□□□□□ -0.47
CLDN11-208ENST00000488989 IGHV3OR16-13A0A075B7E8 117 aa12.13□□□□□ -0.47
CLDN11-208ENST00000488989 IGHV3-74A0A0B4J1X5 117 aa12.13□□□□□ -0.47
CLDN11-208ENST00000488989 IGHV3-66A0A0C4DH42 116 aa12.13□□□□□ -0.47
CLDN11-208ENST00000488989 OR7C2O60412 319 aa12.13□□□□□ -0.47
CLDN11-208ENST00000488989 IGLC2P0DOY2 106 aa12.13□□□□□ -0.47
CLDN11-208ENST00000488989 PYYP10082 97 aa12.13□□□□□ -0.47
CLDN11-208ENST00000488989 HIST1H1EP10412 219 aaKnown RBP12.13□□□□□ -0.47
CLDN11-208ENST00000488989 PSMB3P49720 205 aa12.13□□□□□ -0.47
CLDN11-208ENST00000488989 FAM90A2PQ658T7 463 aa12.13□□□□□ -0.47
CLDN11-208ENST00000488989 TMEM167BQ9NRX6 74 aa12.13□□□□□ -0.47
CLDN11-208ENST00000488989 SMAD5-AS1Q9Y6J3 95 aa12.13□□□□□ -0.47
CLDN11-208ENST00000488989 ANK2Q01484 3957 aa12.13□□□□□ -0.47
CLDN11-208ENST00000488989 A0A087X0K7 114 aa12.12□□□□□ -0.47
CLDN11-208ENST00000488989 CCL20P78556 96 aa12.12□□□□□ -0.47
CLDN11-208ENST00000488989 C17orf77Q96MU5 243 aa12.12□□□□□ -0.47
CLDN11-208ENST00000488989 MDFIQ99750 246 aa12.12□□□□□ -0.47
CLDN11-208ENST00000488989 HRH4Q9H3N8 390 aa12.12□□□□□ -0.47
CLDN11-208ENST00000488989 TMPRSS5Q9H3S3 457 aa12.12□□□□□ -0.47
CLDN11-208ENST00000488989 HELTA6NFD8 242 aa12.11□□□□□ -0.47
CLDN11-208ENST00000488989 M0QZ24 198 aa12.11□□□□□ -0.47
CLDN11-208ENST00000488989 CD5P06127 495 aa12.11□□□□□ -0.47
CLDN11-208ENST00000488989 GALR1P47211 349 aa12.11□□□□□ -0.47
CLDN11-208ENST00000488989 PPT1P50897 306 aa12.11□□□□□ -0.47
CLDN11-208ENST00000488989 UBE2L3P68036 154 aaKnown RBP12.11□□□□□ -0.47
CLDN11-208ENST00000488989 SIGLEC15Q6ZMC9 328 aa12.11□□□□□ -0.47
CLDN11-208ENST00000488989 MED9Q9NWA0 146 aa12.11□□□□□ -0.47
CLDN11-208ENST00000488989 MLXQ9UH92 298 aa12.11□□□□□ -0.47
CLDN11-208ENST00000488989 ARL2-SNX15V9GYD0 113 aa12.11□□□□□ -0.47
CLDN11-208ENST00000488989 CMYA5Q8N3K9 4069 aa12.1□□□□□ -0.47
CLDN11-208ENST00000488989 A0A1B0GV50 99 aa12.1□□□□□ -0.47
CLDN11-208ENST00000488989 H3BQ15 152 aa12.1□□□□□ -0.47
CLDN11-208ENST00000488989 OR10J4P0C629 311 aa12.1□□□□□ -0.47
CLDN11-208ENST00000488989 NBEAP1P0C6P0 100 aa12.1□□□□□ -0.47
CLDN11-208ENST00000488989 MEOX2P50222 304 aa12.1□□□□□ -0.47
CLDN11-208ENST00000488989 GUK1Q16774 197 aa12.1□□□□□ -0.47
CLDN11-208ENST00000488989 WFDC9Q8NEX5 89 aa12.1□□□□□ -0.47
CLDN11-208ENST00000488989 ZNF586Q9NXT0 402 aa12.1□□□□□ -0.47
CLDN11-208ENST00000488989 TRBV19A0A075B6N1 114 aa12.09□□□□□ -0.47
CLDN11-208ENST00000488989 LINC00862A6NCI5 91 aa12.09□□□□□ -0.47
CLDN11-208ENST00000488989 ZNF253O75346 499 aa12.09□□□□□ -0.47
CLDN11-208ENST00000488989 PDE6HQ13956 83 aa12.09□□□□□ -0.47
CLDN11-208ENST00000488989 DEFB114Q30KQ6 69 aa12.09□□□□□ -0.47
CLDN11-208ENST00000488989 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.09□□□□□ -0.47
CLDN11-208ENST00000488989 TCF24Q7RTU0 167 aa12.09□□□□□ -0.47
CLDN11-208ENST00000488989 TRRAPQ9Y4A5 3859 aa12.09□□□□□ -0.47
CLDN11-208ENST00000488989 ATF4P18848 351 aaPredicted RBP12.08□□□□□ -0.48
CLDN11-208ENST00000488989 KRTAP21-3Q3LHN1 58 aa12.08□□□□□ -0.48
CLDN11-208ENST00000488989 MANBALQ9NQG1 85 aa12.08□□□□□ -0.48
CLDN11-208ENST00000488989 VWFP04275 2813 aa12.07□□□□□ -0.48
CLDN11-208ENST00000488989 TRAV25A0A0B4J276 109 aa12.07□□□□□ -0.48
CLDN11-208ENST00000488989 A0A1W2PRE2 83 aa12.07□□□□□ -0.48
CLDN11-208ENST00000488989 ZNF785A8K8V0 405 aa12.07□□□□□ -0.48
CLDN11-208ENST00000488989 NDUFB4O95168 129 aa12.07□□□□□ -0.48
CLDN11-208ENST00000488989 TAGLN2P37802 199 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms