RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 SPTBN4Q9H254 2564 aa11.39□□□□□ -0.59
RER1-207ENST00000488353 A1L4Q6 167 aa11.39□□□□□ -0.59
RER1-207ENST00000488353 KALRNO60229 2985 aa11.39□□□□□ -0.59
RER1-207ENST00000488353 LTAP01374 205 aa11.39□□□□□ -0.59
RER1-207ENST00000488353 APOHP02749 345 aaPredicted RBP11.39□□□□□ -0.59
RER1-207ENST00000488353 GLRXP35754 106 aa11.39□□□□□ -0.59
RER1-207ENST00000488353 FAM169BQ8N8A8 192 aa11.39□□□□□ -0.59
RER1-207ENST00000488353 NAA38Q9BRA0 125 aaKnown RBP11.39□□□□□ -0.59
RER1-207ENST00000488353 SCNM1Q9BWG6 230 aa11.39□□□□□ -0.59
RER1-207ENST00000488353 RNF7Q9UBF6 113 aa11.39□□□□□ -0.59
RER1-207ENST00000488353 TLN1Q9Y490 2541 aaKnown RBP11.39□□□□□ -0.59
RER1-207ENST00000488353 GNG7O60262 68 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 FSTL3O95633 263 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 PPIAL4GP0DN37 164 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 ERHP84090 104 aaKnown RBP11.38□□□□□ -0.59
RER1-207ENST00000488353 LINC00305Q7Z4B0 112 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 OR10W1Q8NGF6 305 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 OR4X2Q8NGF9 303 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 OR4A5Q8NH83 315 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 TCRBV4S1A1TA0A5B7 111 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 NCR2O95944 276 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 CT45A6P0DMU7 189 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 CT45A5P0DMU8 189 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 CT45A7P0DMV0 189 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 TNFAIP6P98066 277 aaPredicted RBP11.38□□□□□ -0.59
RER1-207ENST00000488353 NHLH1Q02575 133 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 BLNKQ8WV28 456 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 GAFA1Q96PS6 74 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 HILPDAQ9Y5L2 63 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 PLXNB1O43157 2135 aa11.38□□□□□ -0.59
RER1-207ENST00000488353 SMAD7O15105 426 aaKnown RBP11.37□□□□□ -0.59
RER1-207ENST00000488353 FABP2P12104 132 aa11.37□□□□□ -0.59
RER1-207ENST00000488353 FA2HQ7L5A8 372 aa11.37□□□□□ -0.59
RER1-207ENST00000488353 Q8NA96 180 aa11.37□□□□□ -0.59
RER1-207ENST00000488353 RAB37Q96AX2 223 aa11.37□□□□□ -0.59
RER1-207ENST00000488353 PTPRQQ9UMZ3 2332 aa11.37□□□□□ -0.59
RER1-207ENST00000488353 NPIPB6E9PJ23 425 aa11.37□□□□□ -0.59
RER1-207ENST00000488353 IGHV1-46P01743 117 aa11.37□□□□□ -0.59
RER1-207ENST00000488353 COL8A1P27658 744 aa11.37□□□□□ -0.59
RER1-207ENST00000488353 SSBP2P81877 361 aaPredicted RBP11.37□□□□□ -0.59
RER1-207ENST00000488353 PRR30Q53SZ7 412 aaPredicted RBP11.37□□□□□ -0.59
RER1-207ENST00000488353 PRSS3P2Q8NHM4 247 aa11.37□□□□□ -0.59
RER1-207ENST00000488353 RELNP78509 3460 aa11.37□□□□□ -0.59
RER1-207ENST00000488353 A0A0G2JNJ9 132 aa11.36□□□□□ -0.59
RER1-207ENST00000488353 ADAMTSL5Q6ZMM2 481 aa11.36□□□□□ -0.59
RER1-207ENST00000488353 SIGMAR1Q99720 223 aa11.36□□□□□ -0.59
RER1-207ENST00000488353 Q9UFV3 132 aa11.36□□□□□ -0.59
RER1-207ENST00000488353 NAV3Q8IVL0 2385 aa11.36□□□□□ -0.59
RER1-207ENST00000488353 IGF2RP11717 2491 aa11.36□□□□□ -0.59
RER1-207ENST00000488353 ZCCHC24Q8N2G6 241 aaKnown RBP11.36□□□□□ -0.59
RER1-207ENST00000488353 OR5AN1Q8NGI8 311 aa11.36□□□□□ -0.59
RER1-207ENST00000488353 FAM222BQ8WU58 562 aa11.36□□□□□ -0.59
RER1-207ENST00000488353 NPIPB3Q92617 1050 aa11.36□□□□□ -0.59
RER1-207ENST00000488353 THYN1Q9P016 225 aa11.36□□□□□ -0.59
RER1-207ENST00000488353 TMEM189A5PLL7 270 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 PLAUP00749 431 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 AZU1P20160 251 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 RPL24P83731 157 aaKnown RBP11.35□□□□□ -0.59
RER1-207ENST00000488353 LGALS9BQ3B8N2 356 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 LGALS9CQ6DKI2 356 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 PERPQ96FX8 193 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 NDUFA4L2Q9NRX3 87 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 SMPXQ9UHP9 88 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 SPTA1P02549 2419 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 IGLV3-9A0A075B6K5 115 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 A0A1B0GUT8 65 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 PRRG2O14669 202 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 IGHV3-48P01763 117 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 TCRAP04437 139 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 SAA1P0DJI8 122 aaPredicted RBP11.35□□□□□ -0.59
RER1-207ENST00000488353 CCL8P80075 99 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 PSG3Q16557 428 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 SLC25A48Q6ZT89 311 aaKnown RBP11.35□□□□□ -0.59
RER1-207ENST00000488353 ZZEF1O43149 2961 aa11.35□□□□□ -0.59
RER1-207ENST00000488353 A0A1B0GV72 72 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 PRSS57Q6UWY2 283 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 GFRALQ6UXV0 394 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 OR8A1Q8NGG7 326 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 RPUSD1Q9UJJ7 312 aaKnown RBP11.34□□□□□ -0.59
RER1-207ENST00000488353 PKDREJQ9NTG1 2253 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 IGKV1D-37A0A075B6S9 117 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 PPIAL4CA0A0B4J2A2 164 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 INS-IGF2F8WCM5 200 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 GOSR1O95249 250 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 CD40P25942 277 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 RIGQ13278 110 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 SAMD5Q5TGI4 173 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 ZNF788Q6ZQV5 615 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 THAP8Q8NA92 274 aa11.34□□□□□ -0.59
RER1-207ENST00000488353 TEX48A0A1B0GUV7 120 aa11.33□□□□□ -0.6
RER1-207ENST00000488353 GATA4P43694 442 aa11.33□□□□□ -0.6
RER1-207ENST00000488353 MEF2CQ06413 473 aaPredicted RBP11.33□□□□□ -0.6
RER1-207ENST00000488353 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
RER1-207ENST00000488353 TMEM116Q8NCL8 245 aa11.33□□□□□ -0.6
RER1-207ENST00000488353 MRPL20Q9BYC9 149 aaKnown RBP11.33□□□□□ -0.6
RER1-207ENST00000488353 GTSF1LQ9H1H1 148 aa11.33□□□□□ -0.6
RER1-207ENST00000488353 E7EUB6 86 aa11.33□□□□□ -0.6
RER1-207ENST00000488353 CCL3L1P16619 93 aa11.33□□□□□ -0.6
RER1-207ENST00000488353 ORM2P19652 201 aa11.33□□□□□ -0.6
RER1-207ENST00000488353 SMIM13P0DJ93 91 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms