RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 MRPL27Q9P0M9 148 aaKnown RBP9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 DNAH3Q8TD57 4116 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 DNAH9Q9NYC9 4486 aa9.3□□□□□ -0.92
HLA-DOB-209ENST00000488325 F8W036 122 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 ADMP35318 185 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 ARL3P36405 182 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 SRSF3P84103 164 aaKnown RBP9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 ZNF343Q6P1L6 599 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 Q6ZSV7 163 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 SUN5Q8TC36 379 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 FAM167A-AS1Q96KT0 104 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 UHRF2Q96PU4 802 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 RARRES2Q99969 163 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 SHANK2-AS3Q9BTD1 123 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 PAXXQ9BUH6 204 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 SLC25A2Q9BXI2 301 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 SLC25A39Q9BZJ4 359 aaPredicted RBP9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 SLC35B3Q9H1N7 401 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 KLK15Q9H2R5 256 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 OR51M1Q9H341 326 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 RABAC1Q9UI14 185 aa9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 PUS1Q9Y606 427 aaKnown RBP eCLIP9.29□□□□□ -0.92
HLA-DOB-209ENST00000488325 H3BRN7 92 aa9.28□□□□□ -0.92
HLA-DOB-209ENST00000488325 SFTA3P0C7M3 94 aa9.28□□□□□ -0.92
HLA-DOB-209ENST00000488325 UBE2L3P68036 154 aaKnown RBP9.28□□□□□ -0.92
HLA-DOB-209ENST00000488325 MEF2BQ02080 365 aaPredicted RBP9.28□□□□□ -0.92
HLA-DOB-209ENST00000488325 RNF152Q8N8N0 203 aa9.28□□□□□ -0.92
HLA-DOB-209ENST00000488325 OR4X2Q8NGF9 303 aa9.28□□□□□ -0.92
HLA-DOB-209ENST00000488325 LINC01006Q8NI28 216 aa9.28□□□□□ -0.92
HLA-DOB-209ENST00000488325 SEC11CQ9BY50 192 aa9.28□□□□□ -0.92
HLA-DOB-209ENST00000488325 SERTAD4Q9NUC0 356 aa9.28□□□□□ -0.92
HLA-DOB-209ENST00000488325 TRAV5A0A0B4J249 113 aa9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 F6UZH7 168 aa9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 PAGE4O60829 102 aa9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 IGHV3-11P01762 117 aa9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 SRP19P09132 144 aaKnown RBP9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 USF2Q15853 346 aaPredicted RBP9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 OXLD1Q5BKU9 147 aa9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 CST9LP1Q5W188 147 aa9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 TOMM20LQ6UXN7 152 aa9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 BPIFA4PQ86YQ2 179 aa9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 LINC00052Q96N35 136 aa9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 TMEM14CQ9P0S9 112 aa9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 PEF1Q9UBV8 284 aaKnown RBP9.27□□□□□ -0.93
HLA-DOB-209ENST00000488325 A0A1W2PRE2 83 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 ZNF98A6NK75 572 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 C11orf94C9JXX5 98 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 PPP5D1E7EU14 171 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 TMEM250H0YL14 139 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 NDUFA4O00483 81 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 PDE6DO43924 150 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 GGCTO75223 188 aaKnown RBP9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 UBE2G2P60604 165 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 SOHLH1Q5JUK2 328 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 MORN5Q5VZ52 161 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 KLHDC1Q8N7A1 406 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 OR4F17Q8NGA8 305 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 MYOZ3Q8TDC0 251 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 TMEM190Q8WZ59 177 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 ZNF503Q96F45 646 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 OR4F4Q96R69 305 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 METTL26Q96S19 204 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 NKX6-2Q9C056 277 aaPredicted RBP9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 C16orf95Q9H693 158 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 ZFAND3Q9H8U3 227 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 CARHSP1Q9Y2V2 147 aaKnown RBP9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 HYDINQ4G0P3 5121 aa9.26□□□□□ -0.93
HLA-DOB-209ENST00000488325 FAM74A7A6NL05 159 aa9.25□□□□□ -0.93
HLA-DOB-209ENST00000488325 C9JQL5 133 aa9.25□□□□□ -0.93
HLA-DOB-209ENST00000488325 RPLP1P05386 114 aaKnown RBP9.25□□□□□ -0.93
HLA-DOB-209ENST00000488325 OR10J4P0C629 311 aa9.25□□□□□ -0.93
HLA-DOB-209ENST00000488325 C10orf91Q5T1B1 145 aa9.25□□□□□ -0.93
HLA-DOB-209ENST00000488325 LCNL1Q6ZST4 164 aa9.25□□□□□ -0.93
HLA-DOB-209ENST00000488325 UBE2E2Q96LR5 201 aa9.25□□□□□ -0.93
HLA-DOB-209ENST00000488325 IGHV3-35A0A0C4DH35 117 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 APOC3P02656 99 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 LGALS1P09382 135 aaKnown RBP9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 NBEAP1P0C6P0 100 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 PYYP10082 97 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 HIST1H1EP10412 219 aaKnown RBP9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 GP9P14770 177 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 RPL7P18124 248 aaKnown RBP9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 CEBPGP53567 150 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 CD81P60033 236 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 KIAA0141Q14154 515 aaPredicted RBP9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 FAM106AQ4KMX7 169 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 C10orf99Q6UWK7 81 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 SVBPQ8N300 66 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 CYB561D1Q8N8Q1 229 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 FXYD5Q96DB9 178 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 GPR82Q96P67 336 aa9.24□□□□□ -0.93
HLA-DOB-209ENST00000488325 TRBV12-3P01733 135 aa9.23□□□□□ -0.93
HLA-DOB-209ENST00000488325 ADCYAP1P18509 176 aa9.23□□□□□ -0.93
HLA-DOB-209ENST00000488325 NPPCP23582 126 aa9.23□□□□□ -0.93
HLA-DOB-209ENST00000488325 ATP5G3P48201 142 aa9.23□□□□□ -0.93
HLA-DOB-209ENST00000488325 FAM74A3Q4VXF1 159 aa9.23□□□□□ -0.93
HLA-DOB-209ENST00000488325 C1orf194Q5T5A4 169 aa9.23□□□□□ -0.93
HLA-DOB-209ENST00000488325 LEMD1Q68G75 181 aa9.23□□□□□ -0.93
HLA-DOB-209ENST00000488325 TCEAL7Q9BRU2 100 aa9.23□□□□□ -0.93
HLA-DOB-209ENST00000488325 C20orf24Q9BUV8 137 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms