RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 CGB3P0DN86 165 aa9.47□□□□□ -0.89
TRA2B-214ENST00000487615 CGB7P0DN87 165 aa9.47□□□□□ -0.89
TRA2B-214ENST00000487615 HIST1H1AQ02539 215 aaPredicted RBP9.47□□□□□ -0.89
TRA2B-214ENST00000487615 NPFFO15130 113 aa9.47□□□□□ -0.89
TRA2B-214ENST00000487615 SAA4P35542 130 aa9.47□□□□□ -0.89
TRA2B-214ENST00000487615 THAP8Q8NA92 274 aa9.47□□□□□ -0.89
TRA2B-214ENST00000487615 SHANK2-AS3Q9BTD1 123 aa9.47□□□□□ -0.89
TRA2B-214ENST00000487615 TNRC6AQ8NDV7 1962 aaKnown RBP9.47□□□□□ -0.89
TRA2B-214ENST00000487615 C22orf46C9J442 243 aa9.46□□□□□ -0.89
TRA2B-214ENST00000487615 ORMDL3Q8N138 153 aa9.46□□□□□ -0.89
TRA2B-214ENST00000487615 TMEM208Q9BTX3 173 aa9.46□□□□□ -0.89
TRA2B-214ENST00000487615 IGLC7A0M8Q6 106 aa9.46□□□□□ -0.89
TRA2B-214ENST00000487615 RPL15P61313 204 aaKnown RBP9.46□□□□□ -0.89
TRA2B-214ENST00000487615 TMEM219Q86XT9 240 aa9.46□□□□□ -0.89
TRA2B-214ENST00000487615 OR4C5Q8NGB2 326 aa9.46□□□□□ -0.89
TRA2B-214ENST00000487615 SMIM12Q96EX1 92 aa9.46□□□□□ -0.89
TRA2B-214ENST00000487615 PRDM13Q9H4Q3 707 aa9.46□□□□□ -0.89
TRA2B-214ENST00000487615 LINC00527Q9UJ94 153 aa9.46□□□□□ -0.89
TRA2B-214ENST00000487615 A1L4Q6 167 aa9.46□□□□□ -0.9
TRA2B-214ENST00000487615 GZMBP10144 247 aa9.46□□□□□ -0.9
TRA2B-214ENST00000487615 PRB4P10163 310 aaPredicted RBP9.46□□□□□ -0.9
TRA2B-214ENST00000487615 SLC25A34Q6PIV7 304 aa9.46□□□□□ -0.9
TRA2B-214ENST00000487615 TRAV41A0A0B4J266 112 aa9.46□□□□□ -0.9
TRA2B-214ENST00000487615 ASCL2Q99929 193 aa9.46□□□□□ -0.9
TRA2B-214ENST00000487615 TGFAP01135 160 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 HTN1P15515 57 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 HINT1P49773 126 aaPredicted RBP9.45□□□□□ -0.9
TRA2B-214ENST00000487615 TRANK1O15050 2925 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 A0A1B0GV90 55 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 OR4C46A6NHA9 309 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 M0R3E3 92 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 DYNLRB2Q8TF09 96 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 V9GYV3 84 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 KIAA1549Q9HCM3 1950 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 TRBV20OR9-2A0A075B6H5 130 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 UBE2E1P51965 193 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 CTAG1AP78358 180 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 C22orf34Q6ZV56 151 aa9.45□□□□□ -0.9
TRA2B-214ENST00000487615 KLF2Q9Y5W3 355 aaPredicted RBP9.45□□□□□ -0.9
TRA2B-214ENST00000487615 YPEL3P61236 119 aaPredicted RBP9.44□□□□□ -0.9
TRA2B-214ENST00000487615 PAX8Q06710 450 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 Q86TA4 180 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 PIEZO1Q92508 2521 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 IGKV2-40A0A087WW87 121 aaPredicted RBP9.44□□□□□ -0.9
TRA2B-214ENST00000487615 IGKV2D-40P01614 121 aaPredicted RBP9.44□□□□□ -0.9
TRA2B-214ENST00000487615 LINC00614P0C842 121 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 IGLC1P0CG04 106 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 NMUP48645 174 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 EIF4EBP1Q13541 118 aaPredicted RBP9.44□□□□□ -0.9
TRA2B-214ENST00000487615 DNLZQ5SXM8 178 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 BRD3OSQ6XYD6 125 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 NPIPB5A8MRT5 1133 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 PDE6HQ13956 83 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 PSG3Q16557 428 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 NIT1Q86X76 327 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 MIEN1Q9BRT3 115 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 ADAMTS20P59510 1910 aa9.44□□□□□ -0.9
TRA2B-214ENST00000487615 LAMA2P24043 3122 aaKnown RBP9.43□□□□□ -0.9
TRA2B-214ENST00000487615 SSBP2P81877 361 aaPredicted RBP9.43□□□□□ -0.9
TRA2B-214ENST00000487615 C12orf54Q6X4T0 127 aa9.43□□□□□ -0.9
TRA2B-214ENST00000487615 C14orf144Q96I85 54 aa9.43□□□□□ -0.9
TRA2B-214ENST00000487615 PYGO2Q9BRQ0 406 aa9.43□□□□□ -0.9
TRA2B-214ENST00000487615 CEP295Q9C0D2 2601 aa9.43□□□□□ -0.9
TRA2B-214ENST00000487615 TCTAP57738 103 aa9.43□□□□□ -0.9
TRA2B-214ENST00000487615 FXYD5Q96DB9 178 aa9.43□□□□□ -0.9
TRA2B-214ENST00000487615 ZNF841Q6ZN19 808 aa9.43□□□□□ -0.9
TRA2B-214ENST00000487615 FAM231DQ6ZW35 169 aa9.43□□□□□ -0.9
TRA2B-214ENST00000487615 A0A1B0GUS0 222 aa9.43□□□□□ -0.9
TRA2B-214ENST00000487615 SNRPD3P62318 126 aaKnown RBP9.43□□□□□ -0.9
TRA2B-214ENST00000487615 LINC00574Q9H8X3 128 aa9.43□□□□□ -0.9
TRA2B-214ENST00000487615 NOTCH3Q9UM47 2321 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 LAMA3Q16787 3333 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 IGHV2-70DA0A0C4DH43 119 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 Q0VG73 95 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 CHCHD1Q96BP2 118 aaKnown RBP9.42□□□□□ -0.9
TRA2B-214ENST00000487615 NCOR2Q9Y618 2525 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 HCFC1P51610 2035 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 CBY3A6NI87 242 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 NDUFB8O95169 186 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 CYB5R2Q6BCY4 276 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 FAM159AQ6UWV7 190 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 MRPL27Q9P0M9 148 aaKnown RBP9.42□□□□□ -0.9
TRA2B-214ENST00000487615 TRBV7-1A0A0A6YYK4 115 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 SH2D7A6NKC9 451 aaPredicted RBP9.42□□□□□ -0.9
TRA2B-214ENST00000487615 M0R381 172 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 CD33P20138 364 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 UTF1Q5T230 341 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 TEX29Q8N6K0 151 aa9.42□□□□□ -0.9
TRA2B-214ENST00000487615 TRBV19A0A075B6N1 114 aa9.41□□□□□ -0.9
TRA2B-214ENST00000487615 A6NDN8 102 aa9.41□□□□□ -0.9
TRA2B-214ENST00000487615 H3BUX3 64 aa9.41□□□□□ -0.9
TRA2B-214ENST00000487615 K7EN84 100 aa9.41□□□□□ -0.9
TRA2B-214ENST00000487615 NUDT3O95989 172 aa9.41□□□□□ -0.9
TRA2B-214ENST00000487615 ZNF414Q96IQ9 312 aa9.41□□□□□ -0.9
TRA2B-214ENST00000487615 ZNF492Q9P255 531 aa9.41□□□□□ -0.9
TRA2B-214ENST00000487615 A6NNC1 897 aa9.41□□□□□ -0.9
TRA2B-214ENST00000487615 ASIPP42127 132 aa9.41□□□□□ -0.9
TRA2B-214ENST00000487615 PRR31Q5SQ13 230 aa9.41□□□□□ -0.9
TRA2B-214ENST00000487615 C1orf194Q5T5A4 169 aa9.41□□□□□ -0.9
TRA2B-214ENST00000487615 TMEM14CQ9P0S9 112 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms