RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 LYPD1Q8N2G4 141 aa5.56□□□□□ -1.52
SMARCAL1-212ENST00000486983 ARL6IP6Q8N6S5 226 aa5.56□□□□□ -1.52
SMARCAL1-212ENST00000486983 CMTM2Q8TAZ6 248 aa5.56□□□□□ -1.52
SMARCAL1-212ENST00000486983 NOL4LQ96MY1 436 aaPredicted RBP5.56□□□□□ -1.52
SMARCAL1-212ENST00000486983 GPR82Q96P67 336 aa5.56□□□□□ -1.52
SMARCAL1-212ENST00000486983 SLC25A39Q9BZJ4 359 aaPredicted RBP5.56□□□□□ -1.52
SMARCAL1-212ENST00000486983 OTORQ9NRC9 128 aa5.56□□□□□ -1.52
SMARCAL1-212ENST00000486983 NAT8BQ9UHF3 227 aa5.56□□□□□ -1.52
SMARCAL1-212ENST00000486983 SOX21Q9Y651 276 aaPredicted RBP5.56□□□□□ -1.52
SMARCAL1-212ENST00000486983 POLEQ07864 2286 aa5.56□□□□□ -1.52
SMARCAL1-212ENST00000486983 ARFGEF3Q5TH69 2177 aa5.56□□□□□ -1.52
SMARCAL1-212ENST00000486983 DIDO1Q9BTC0 2240 aaKnown RBP5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 IGLV11-55A0A075B6I3 123 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 IGHV2-70DA0A0C4DH43 119 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 WI2-2373I1.2A0A1W2PRP0 233 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 FAM231BA6NCW3 169 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 ZNF705GA8MUZ8 300 aaPredicted RBP5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 GATCO43716 136 aaKnown RBP5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 IGHV3-48P01763 117 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 TCRAP04437 139 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 SLC25A5P05141 298 aaKnown RBP5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 RD3LP0DJH9 198 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 FCGR2BP31994 310 aaPredicted RBP5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 IER3P46695 156 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 DLX1P56177 255 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 TPPP2P59282 170 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 PDE6HQ13956 83 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 FXYD3Q14802 87 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 USF2Q15853 346 aaPredicted RBP5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 RNF151Q2KHN1 245 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 ZNF600Q6ZNG1 722 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 C19orf35Q6ZS72 473 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 VMO1Q7Z5L0 202 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 BPIFA4PQ86YQ2 179 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 TTC9CQ8N5M4 171 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 TSKUQ8WUA8 353 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 ARPC1AQ92747 370 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 SHANK2-AS3Q9BTD1 123 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 GFRA4Q9GZZ7 299 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 SIRPDQ9H106 197 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 CDIP1Q9H305 208 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 Q9H3A6 140 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 THYN1Q9P016 225 aa5.55□□□□□ -1.52
SMARCAL1-212ENST00000486983 ZGRF1Q86YA3 2104 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 TRBV19A0A075B6N1 114 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 SERTM2A0A1B0GWG4 89 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 C19orf71A6NCJ1 209 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 PGPA6NDG6 321 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 SMAD7O15105 426 aaKnown RBP5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 LY6HO94772 140 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 HLA-DRB1P01911 266 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 IGLC2P0DOY2 106 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 S100A7P31151 101 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 UBE2E1P51965 193 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 RAB4BP61018 213 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 LYZP61626 148 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 KLRD1Q13241 179 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 LHFPL4Q7Z7J7 247 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 Q86TA4 180 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 TMEM75Q8N9X5 138 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 OR4F17Q8NGA8 305 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 OR4B1Q8NGF8 309 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 ITLN2Q8WWU7 325 aaPredicted RBP5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 RNF125Q96EQ8 232 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 TXN2Q99757 166 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 PRSS22Q9GZN4 317 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 ZNF331Q9NQX6 463 aaPredicted RBP5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 C1RLQ9NZP8 487 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 TP53TG3Q9ULZ0 132 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 HILPDAQ9Y5L2 63 aa5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 HRNRQ86YZ3 2850 aaPredicted RBP5.54□□□□□ -1.52
SMARCAL1-212ENST00000486983 A0A1B0GXF2 115 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 A0A1W2PPR1 153 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 FBLL1A6NHQ2 334 aaKnown RBP5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 A8MWL6 223 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 MRPS12O15235 138 aaKnown RBP5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 OR2J3O76001 311 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 FAM106CPP0CH98 169 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 APELAP0DMC3 54 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 DDTP30046 118 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 BRS3P32247 399 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 MFAP4P55083 255 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 GNG5P63218 68 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 DEFA6Q01524 100 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 PRB3Q04118 309 aaPredicted RBP5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 ASPHD1Q5U4P2 390 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 C16orf54Q6UWD8 224 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 LURAP1LQ8IV03 231 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 TMEM256Q8N2U0 113 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 ZNF491Q8N8L2 437 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 BLNKQ8WV28 456 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 KCNS1Q96KK3 526 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 LINC00479Q96M42 142 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 MS4A10Q96PG2 267 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 RPP21Q9H633 154 aaKnown RBP5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 LPAR2Q9HBW0 351 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 SERTAD4Q9NUC0 356 aa5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 YLPM1P49750 1951 aaKnown RBP5.53□□□□□ -1.52
SMARCAL1-212ENST00000486983 TNCP24821 2201 aa5.52□□□□□ -1.53
SMARCAL1-212ENST00000486983 IGHV3-21A0A0B4J1V1 117 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms