RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TBX15Q96SF7 602 aa14.19□□□□□ -0.14
PDLIM7-207ENST00000486828 KIR2DL5BA0A0G2JN68 375 aa14.18□□□□□ -0.14
PDLIM7-207ENST00000486828 KIR2DL5BA0A0G2JPC4 375 aa14.18□□□□□ -0.14
PDLIM7-207ENST00000486828 GDF5OSQ5U4N7 250 aa14.18□□□□□ -0.14
PDLIM7-207ENST00000486828 ZNF562Q6V9R5 426 aa14.18□□□□□ -0.14
PDLIM7-207ENST00000486828 BPIFA4PQ86YQ2 179 aa14.18□□□□□ -0.14
PDLIM7-207ENST00000486828 KIR2DL5AQ8N109 375 aa14.18□□□□□ -0.14
PDLIM7-207ENST00000486828 ZNF491Q8N8L2 437 aa14.18□□□□□ -0.14
PDLIM7-207ENST00000486828 RNF24Q9Y225 148 aa14.18□□□□□ -0.14
PDLIM7-207ENST00000486828 ARHGAP32A7KAX9 2087 aa14.18□□□□□ -0.14
PDLIM7-207ENST00000486828 A0A1W2PPR1 153 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 HOXB4P17483 251 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 MINOS1Q5TGZ0 78 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 Q86TA4 180 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 DYNAPQ8N1N2 210 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 EXOC3-AS1Q8N2X6 119 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 ARPC1AQ92747 370 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 RNF125Q96EQ8 232 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 MINOS1-NBL1R4GNA1 71 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 IGLV11-55A0A075B6I3 123 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 TRBV19A0A075B6N1 114 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 TRAV30A0A087WSZ9 112 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 A0A1B0GXF2 115 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 WI2-2373I1.2A0A1W2PRP0 233 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 A0A1W2PS18 150 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 P01737 135 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 ZFP36P26651 326 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 KLF17Q5JT82 389 aaPredicted RBP14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 TOMM20LQ6UXN7 152 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 Q8N6K4 173 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 OR4F17Q8NGA8 305 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 FANCD2OSQ96PS1 177 aa14.17□□□□□ -0.14
PDLIM7-207ENST00000486828 TRBV6-1A0A0K0K1D8 114 aa14.16□□□□□ -0.14
PDLIM7-207ENST00000486828 A6NNC1 897 aa14.16□□□□□ -0.14
PDLIM7-207ENST00000486828 A8MWL6 223 aa14.16□□□□□ -0.14
PDLIM7-207ENST00000486828 VWC2LB2RUY7 222 aa14.16□□□□□ -0.14
PDLIM7-207ENST00000486828 IL4P05112 153 aa14.16□□□□□ -0.14
PDLIM7-207ENST00000486828 CDKN1AP38936 164 aa14.16□□□□□ -0.14
PDLIM7-207ENST00000486828 EBI3Q14213 229 aa14.16□□□□□ -0.14
PDLIM7-207ENST00000486828 TEX43Q6ZNM6 134 aa14.16□□□□□ -0.14
PDLIM7-207ENST00000486828 ZNF48Q96MX3 618 aaPredicted RBP14.16□□□□□ -0.14
PDLIM7-207ENST00000486828 TBL2Q9Y4P3 447 aaKnown RBP14.16□□□□□ -0.14
PDLIM7-207ENST00000486828 USP9XQ93008 2570 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 OR2J3O76001 311 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 IGLV2-11P01706 119 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 IGLC2P0DOY2 106 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 TMEM95Q3KNT9 176 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 TCF24Q7RTU0 167 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 TTC9CQ8N5M4 171 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 C18orf32Q8TCD1 76 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 NCBP2LA6PVI3 153 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 GNG7O60262 68 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 ZNF324O75467 553 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 AMTP48728 403 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 MFAP4P55083 255 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 NDPQ00604 133 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 GOLT1AQ6ZVE7 132 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 LYPD1Q8N2G4 141 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 DAZAP1Q96EP5 407 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 GFRA4Q9GZZ7 299 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 FBXL7Q9UJT9 491 aa14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 SOX21Q9Y651 276 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-207ENST00000486828 TRAV8-1A0A0A6YYK1 113 aa14.14□□□□□ -0.15
PDLIM7-207ENST00000486828 NPIPB6E9PJ23 425 aa14.14□□□□□ -0.15
PDLIM7-207ENST00000486828 MRPS12O15235 138 aaKnown RBP14.14□□□□□ -0.15
PDLIM7-207ENST00000486828 NDUFS7O75251 213 aa14.14□□□□□ -0.15
PDLIM7-207ENST00000486828 HLA-DRB1P01911 266 aa14.14□□□□□ -0.15
PDLIM7-207ENST00000486828 SIRPDQ9H106 197 aa14.14□□□□□ -0.15
PDLIM7-207ENST00000486828 NRN1Q9NPD7 142 aa14.14□□□□□ -0.15
PDLIM7-207ENST00000486828 S4R3C0 116 aa14.14□□□□□ -0.15
PDLIM7-207ENST00000486828 CAMPP49913 170 aa14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 KLF5Q13887 457 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 LBHQ53QV2 105 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 SIGLEC15Q6ZMC9 328 aa14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 S100A7AQ86SG5 101 aa14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 GTSF1Q8WW33 167 aa14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 C17orf77Q96MU5 243 aa14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 RNF114Q9Y508 228 aa14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 UBR5O95071 2799 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 TOX4O94842 621 aa14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 TMEM11P17152 192 aa14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 PMCHP20382 165 aa14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 FCGR2BP31994 310 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 HBBP68871 147 aa14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 PRNTQ86SH4 94 aa14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 TMEM75Q8N9X5 138 aa14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 SSBP4Q9BWG4 385 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-207ENST00000486828 FAM231BA6NCW3 169 aa14.12□□□□□ -0.15
PDLIM7-207ENST00000486828 F8W735 103 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-207ENST00000486828 CIARTQ8N365 385 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-207ENST00000486828 OR4B1Q8NGF8 309 aa14.12□□□□□ -0.15
PDLIM7-207ENST00000486828 VN1R17PQ8TDU5 208 aa14.12□□□□□ -0.15
PDLIM7-207ENST00000486828 ZNF414Q96IQ9 312 aa14.12□□□□□ -0.15
PDLIM7-207ENST00000486828 ALKBH7Q9BT30 221 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-207ENST00000486828 UBTD1Q9HAC8 227 aa14.12□□□□□ -0.15
PDLIM7-207ENST00000486828 KRTDAPP60985 99 aa14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 C2orf88Q9BSF0 95 aa14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 C21orf62Q9NYP8 219 aa14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 THYN1Q9P016 225 aa14.11□□□□□ -0.15
PDLIM7-207ENST00000486828 LRRK2Q5S007 2527 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms