RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 EREGO14944 169 aa10.64□□□□□ -0.71
HMGN1-216ENST00000486741 PAFAH1B2P68402 229 aa10.64□□□□□ -0.71
HMGN1-216ENST00000486741 C15orf32Q32M92 178 aa10.64□□□□□ -0.71
HMGN1-216ENST00000486741 SPANXN1Q5VSR9 72 aa10.64□□□□□ -0.71
HMGN1-216ENST00000486741 NUDT10Q8NFP7 164 aa10.63□□□□□ -0.71
HMGN1-216ENST00000486741 NUDT11Q96G61 164 aa10.63□□□□□ -0.71
HMGN1-216ENST00000486741 PRTN3P24158 256 aa10.63□□□□□ -0.71
HMGN1-216ENST00000486741 SAA4P35542 130 aa10.63□□□□□ -0.71
HMGN1-216ENST00000486741 ALKBH7Q9BT30 221 aaPredicted RBP10.63□□□□□ -0.71
HMGN1-216ENST00000486741 HCFC1P51610 2035 aa10.63□□□□□ -0.71
HMGN1-216ENST00000486741 AMBPP02760 352 aa10.63□□□□□ -0.71
HMGN1-216ENST00000486741 PFN1P07737 140 aaKnown RBP10.63□□□□□ -0.71
HMGN1-216ENST00000486741 PPIFP30405 207 aaKnown RBP10.63□□□□□ -0.71
HMGN1-216ENST00000486741 EEF1AKMT3Q96AZ1 226 aa10.63□□□□□ -0.71
HMGN1-216ENST00000486741 NCOR1P1Q9H4R4 102 aa10.63□□□□□ -0.71
HMGN1-216ENST00000486741 UQCR10Q9UDW1 63 aa10.63□□□□□ -0.71
HMGN1-216ENST00000486741 TBL2Q9Y4P3 447 aaKnown RBP10.63□□□□□ -0.71
HMGN1-216ENST00000486741 A0A1B0GWJ7 208 aa10.62□□□□□ -0.71
HMGN1-216ENST00000486741 GGTLC3B5MD39 225 aa10.62□□□□□ -0.71
HMGN1-216ENST00000486741 PRSS1P07477 247 aa10.62□□□□□ -0.71
HMGN1-216ENST00000486741 SMIM17P0DL12 118 aa10.62□□□□□ -0.71
HMGN1-216ENST00000486741 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
HMGN1-216ENST00000486741 RUSC1-AS1Q66K80 236 aa10.62□□□□□ -0.71
HMGN1-216ENST00000486741 TMEM208Q9BTX3 173 aa10.62□□□□□ -0.71
HMGN1-216ENST00000486741 HBBP68871 147 aa10.62□□□□□ -0.71
HMGN1-216ENST00000486741 RPP21Q9H633 154 aaKnown RBP10.62□□□□□ -0.71
HMGN1-216ENST00000486741 POLQO75417 2590 aa10.62□□□□□ -0.71
HMGN1-216ENST00000486741 CKS2P33552 79 aa10.62□□□□□ -0.71
HMGN1-216ENST00000486741 DDB2Q92466 427 aa10.62□□□□□ -0.71
HMGN1-216ENST00000486741 C2orf88Q9BSF0 95 aa10.62□□□□□ -0.71
HMGN1-216ENST00000486741 OSTCQ9NRP0 149 aa10.62□□□□□ -0.71
HMGN1-216ENST00000486741 DUX5Q96PT3 197 aa10.61□□□□□ -0.71
HMGN1-216ENST00000486741 SMAD7O15105 426 aaKnown RBP10.61□□□□□ -0.71
HMGN1-216ENST00000486741 MGPP08493 103 aa10.61□□□□□ -0.71
HMGN1-216ENST00000486741 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.61□□□□□ -0.71
HMGN1-216ENST00000486741 COL5A1P20908 1838 aaPredicted RBP10.61□□□□□ -0.71
HMGN1-216ENST00000486741 GAGE10A6NGK3 116 aa10.61□□□□□ -0.71
HMGN1-216ENST00000486741 SRD5A1P18405 259 aa10.61□□□□□ -0.71
HMGN1-216ENST00000486741 TM4SF20Q53R12 229 aa10.61□□□□□ -0.71
HMGN1-216ENST00000486741 OR4B1Q8NGF8 309 aa10.61□□□□□ -0.71
HMGN1-216ENST00000486741 GLMPQ8WWB7 406 aa10.61□□□□□ -0.71
HMGN1-216ENST00000486741 SORL1Q92673 2214 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 IGKV2-40A0A087WW87 121 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-216ENST00000486741 IGKV2D-40P01614 121 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-216ENST00000486741 ADORA2A-AS1P86434 159 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 TRGV9Q99603 122 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 IZUMO1RA6ND01 250 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 LEPROTL1O95214 131 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 NDPQ00604 133 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 PSG9Q00887 426 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 MORN5Q5VZ52 161 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 DMRTC2Q8IXT2 367 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-216ENST00000486741 ZNF664Q8N3J9 261 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 PSG8Q9UQ74 426 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 NPIPB5A8MRT5 1133 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 G3V318 75 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 LDLRAD2Q5SZI1 272 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 Q8TAT8 98 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 MAP1LC3CQ9BXW4 147 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 OTORQ9NRC9 128 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 KAAG1Q9UBP8 84 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 CDC42EP3Q9UKI2 254 aa10.6□□□□□ -0.71
HMGN1-216ENST00000486741 BMI1P35226 326 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 FOXL1Q12952 345 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 C2CD3Q4AC94 2353 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 TCRAP04437 139 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 HIST1H1AQ02539 215 aaPredicted RBP10.59□□□□□ -0.71
HMGN1-216ENST00000486741 PVRIGQ6DKI7 326 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 CDPF1Q6NVV7 123 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 FMC1Q96HJ9 113 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 PRR20EP86478 221 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 PRR20CP86479 221 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 PRR20DP86480 221 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 PRR20BP86481 221 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 PRR20AP86496 221 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 POU2AF1Q16633 256 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 ZNF329Q86UD4 541 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 BEND2Q8NDZ0 799 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 WFDC12Q8WWY7 111 aa10.59□□□□□ -0.71
HMGN1-216ENST00000486741 IGKV1OR2-108A0A075B7D4 117 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 PMCHL1Q16048 86 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 PMCHL2Q9BQD1 86 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 TMEM191AQ9H0A3 160 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 A0A1B0GUT8 65 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 H3BUX3 64 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 NPSP0C0P6 89 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 PLP1P60201 277 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 LINC00311Q8N616 119 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 TRBV9A0A0B4J1U6 114 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 C9JCJ5 164 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 M0R1W7 72 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 OR10J6PQ8NGY7 276 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 LSM4Q9Y4Z0 139 aaKnown RBP10.58□□□□□ -0.72
HMGN1-216ENST00000486741 DSCAMO60469 2012 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 NDUFB8O95169 186 aa10.58□□□□□ -0.72
HMGN1-216ENST00000486741 NPFFO15130 113 aa10.57□□□□□ -0.72
HMGN1-216ENST00000486741 CIDEAO60543 219 aa10.57□□□□□ -0.72
HMGN1-216ENST00000486741 RIPPLY3P57055 190 aa10.57□□□□□ -0.72
HMGN1-216ENST00000486741 FAM71F2Q6NXP2 309 aa10.57□□□□□ -0.72
HMGN1-216ENST00000486741 TMEM136Q6ZRR5 245 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms