RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 IGKV2D-26A0A0A0MRZ7 120 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 F8W1H4 67 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 INS-IGF2F8WCM5 200 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 K7EMI3 77 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 CECR9P0C854 216 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 PAX8Q06710 450 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 C6orf15Q6UXA7 325 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-208ENST00000486641 MOGAT3Q86VF5 341 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 SSUH2Q9Y2M2 353 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 K7ESF4 209 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 NDUFS7O75251 213 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 HBDP02042 147 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 OSR1Q8TAX0 266 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-208ENST00000486641 PRELID3AQ96N28 172 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 MRPL20Q9BYC9 149 aaKnown RBP8.48□□□□□ -1.05
CCDC171-208ENST00000486641 RAB9BQ9NP90 201 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 PLSCR4Q9NRQ2 329 aa8.48□□□□□ -1.05
CCDC171-208ENST00000486641 MRPS17Q9Y2R5 130 aaKnown RBP8.48□□□□□ -1.05
CCDC171-208ENST00000486641 NAV3Q8IVL0 2385 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 A0A1W2PRD5 423 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 A0A1W2PRF3 423 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 A0A1W2PRM7 423 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 C19orf67A6NJJ6 358 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 J3QR89 54 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 CRYBA4P53673 196 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 SUB1P53999 127 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCDC171-208ENST00000486641 MSMPQ1L6U9 139 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 PEAR1Q5VY43 1037 aaPredicted RBP8.47□□□□□ -1.05
CCDC171-208ENST00000486641 MBNL2Q5VZF2 373 aaKnown RBP8.47□□□□□ -1.05
CCDC171-208ENST00000486641 ZNF493Q6ZR52 646 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 U3KQK5 164 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 CEP290O15078 2479 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 A0A1B0GW15 77 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 PRR33A8MZF0 331 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 LHBP01229 141 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 CRIP1P50238 77 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 MZT1Q08AG7 82 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 ETDBQ3ZM63 59 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 AMN1Q8IY45 258 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 ARPC1AQ92747 370 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 CHAC1Q9BUX1 264 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 OTORQ9NRC9 128 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 NHP2Q9NX24 153 aaKnown RBP8.47□□□□□ -1.05
CCDC171-208ENST00000486641 HIGD1BQ9P298 99 aa8.47□□□□□ -1.05
CCDC171-208ENST00000486641 HEATR1Q9H583 2144 aaKnown RBP8.46□□□□□ -1.05
CCDC171-208ENST00000486641 IGHV3-21A0A0B4J1V1 117 aa8.46□□□□□ -1.05
CCDC171-208ENST00000486641 WI2-2373I1.2A0A1W2PRP0 233 aa8.46□□□□□ -1.05
CCDC171-208ENST00000486641 TMEM213A2RRL7 107 aa8.46□□□□□ -1.05
CCDC171-208ENST00000486641 E9PLD3 99 aa8.46□□□□□ -1.05
CCDC171-208ENST00000486641 H3BMG7 143 aa8.46□□□□□ -1.05
CCDC171-208ENST00000486641 HOXB4P17483 251 aaPredicted RBP8.46□□□□□ -1.05
CCDC171-208ENST00000486641 Q6ZT83 130 aa8.46□□□□□ -1.05
CCDC171-208ENST00000486641 C8orf46Q8TAG6 207 aa8.46□□□□□ -1.05
CCDC171-208ENST00000486641 DSPP15924 2871 aaKnown RBP8.46□□□□□ -1.06
CCDC171-208ENST00000486641 IGLL5B9A064 214 aa8.46□□□□□ -1.06
CCDC171-208ENST00000486641 C16orf97H3BN30 126 aa8.46□□□□□ -1.06
CCDC171-208ENST00000486641 CT45A10P0DMU9 189 aa8.46□□□□□ -1.06
CCDC171-208ENST00000486641 INSL3P51460 131 aa8.46□□□□□ -1.06
CCDC171-208ENST00000486641 ATP5G2Q06055 141 aa8.46□□□□□ -1.06
CCDC171-208ENST00000486641 FAM104BQ5XKR9 115 aa8.46□□□□□ -1.06
CCDC171-208ENST00000486641 ZNF833PQ6ZTB9 187 aa8.46□□□□□ -1.06
CCDC171-208ENST00000486641 TMEM167AQ8TBQ9 72 aa8.46□□□□□ -1.06
CCDC171-208ENST00000486641 RPUSD1Q9UJJ7 312 aaKnown RBP8.46□□□□□ -1.06
CCDC171-208ENST00000486641 HHLA3Q9XRX5 114 aa8.46□□□□□ -1.06
CCDC171-208ENST00000486641 TRGV5A0A0B4J1U4 118 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 CXCL12P48061 93 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 TCTEX1D4Q5JR98 221 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 HCP5Q6MZN7 132 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 CEND1Q8N111 149 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 ORMDL3Q8N138 153 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 DEFB108BQ8NET1 73 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 TRGV9Q99603 122 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 TRBV25-1A0A075B6N4 114 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 A0A1W2PPI3 338 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 SMKR1H3BMG3 65 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 KLRC4-KLRK1H3BQV0 150 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 K7EQM0 130 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 SLC25A17O43808 307 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 CFIP05156 583 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 CRYGCP07315 174 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 TNFRSF1AP19438 455 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 MRPL51Q4U2R6 128 aaKnown RBP8.45□□□□□ -1.06
CCDC171-208ENST00000486641 LYZL1Q6UWQ5 148 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 ZNF562Q6V9R5 426 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 MTURNQ8N3F0 131 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 CNEP1R1Q8N9A8 125 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 PIFOQ8TCI5 191 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 TM2D2Q9BX73 214 aa8.45□□□□□ -1.06
CCDC171-208ENST00000486641 MED13Q9UHV7 2174 aa8.44□□□□□ -1.06
CCDC171-208ENST00000486641 IGHV1-18A0A0C4DH31 117 aa8.44□□□□□ -1.06
CCDC171-208ENST00000486641 SPRY3O43610 288 aa8.44□□□□□ -1.06
CCDC171-208ENST00000486641 TMEM164Q5U3C3 297 aa8.44□□□□□ -1.06
CCDC171-208ENST00000486641 AMTNQ6UX39 209 aa8.44□□□□□ -1.06
CCDC171-208ENST00000486641 CCL13Q99616 98 aa8.44□□□□□ -1.06
CCDC171-208ENST00000486641 LINC00574Q9H8X3 128 aa8.44□□□□□ -1.06
CCDC171-208ENST00000486641 RAI1Q7Z5J4 1906 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-208ENST00000486641 PLXNB1O43157 2135 aa8.44□□□□□ -1.06
CCDC171-208ENST00000486641 TRBV6-1A0A0K0K1D8 114 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 NPYP01303 97 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 DIAPH2-AS1Q14236 149 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms