RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 LYPD1Q8N2G4 141 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 ZNF502Q8TBZ5 544 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 PIFOQ8TCI5 191 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 VPS13CQ709C8 3753 aa15.9■□□□□ 0.14
HPS3-206ENST00000486530 XKRY2A2RUG3 117 aa15.9■□□□□ 0.14
HPS3-206ENST00000486530 MRPS12O15235 138 aaKnown RBP15.9■□□□□ 0.14
HPS3-206ENST00000486530 RHOGP84095 191 aa15.9■□□□□ 0.14
HPS3-206ENST00000486530 CMTM2Q8TAZ6 248 aa15.9■□□□□ 0.14
HPS3-206ENST00000486530 CHRDL1Q9BU40 450 aa15.9■□□□□ 0.14
HPS3-206ENST00000486530 GPR61Q9BZJ8 451 aa15.9■□□□□ 0.14
HPS3-206ENST00000486530 SERTAD4Q9NUC0 356 aa15.9■□□□□ 0.14
HPS3-206ENST00000486530 SMIM27A0A1W2PRY6 76 aa15.89■□□□□ 0.13
HPS3-206ENST00000486530 SH2D7A6NKC9 451 aaPredicted RBP15.88■□□□□ 0.13
HPS3-206ENST00000486530 LTAP01374 205 aa15.88■□□□□ 0.13
HPS3-206ENST00000486530 GATA3P23771 443 aa15.88■□□□□ 0.13
HPS3-206ENST00000486530 S100A7P31151 101 aa15.88■□□□□ 0.13
HPS3-206ENST00000486530 TRAV20A0A0B4J274 112 aa15.88■□□□□ 0.13
HPS3-206ENST00000486530 G3V318 75 aa15.88■□□□□ 0.13
HPS3-206ENST00000486530 GATCO43716 136 aaKnown RBP15.88■□□□□ 0.13
HPS3-206ENST00000486530 CRIP2P52943 208 aaPredicted RBP15.88■□□□□ 0.13
HPS3-206ENST00000486530 PDE6HQ13956 83 aa15.88■□□□□ 0.13
HPS3-206ENST00000486530 EXOC3-AS1Q8N2X6 119 aa15.88■□□□□ 0.13
HPS3-206ENST00000486530 MLST8Q9BVC4 326 aa15.88■□□□□ 0.13
HPS3-206ENST00000486530 HIF1ANQ9NWT6 349 aa15.88■□□□□ 0.13
HPS3-206ENST00000486530 LINC01548A6NM66 108 aa15.87■□□□□ 0.13
HPS3-206ENST00000486530 ADMP35318 185 aa15.87■□□□□ 0.13
HPS3-206ENST00000486530 COX19Q49B96 90 aa15.87■□□□□ 0.13
HPS3-206ENST00000486530 PDZD11Q5EBL8 140 aa15.87■□□□□ 0.13
HPS3-206ENST00000486530 SIGLEC15Q6ZMC9 328 aa15.87■□□□□ 0.13
HPS3-206ENST00000486530 MBD6Q96DN6 1003 aa15.87■□□□□ 0.13
HPS3-206ENST00000486530 RABAC1Q9UI14 185 aa15.87■□□□□ 0.13
HPS3-206ENST00000486530 BCL6BQ8N143 479 aaPredicted RBP15.86■□□□□ 0.13
HPS3-206ENST00000486530 NUDT10Q8NFP7 164 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 NUDT11Q96G61 164 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 GRAMD2BQ96HH9 432 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 ZNF414Q96IQ9 312 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 SGK494Q96LW2 274 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 PSMG3-AS1Q96PY0 264 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 A0A096LNT2 108 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 TRBV6-1A0A0K0K1D8 114 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 BMPR1BO00238 502 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 AMY1AP04745 511 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 CBLN1P23435 193 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 GPR183P32249 361 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 PRR27Q6MZM9 219 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 Q86TA4 180 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 EEF1AKMT3Q96AZ1 226 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 GNB1LQ9BYB4 327 aa15.86■□□□□ 0.13
HPS3-206ENST00000486530 USP9YO00507 2555 aaPredicted RBP15.86■□□□□ 0.13
HPS3-206ENST00000486530 RPL7P18124 248 aaKnown RBP15.85■□□□□ 0.13
HPS3-206ENST00000486530 WDR73Q6P4I2 378 aa15.85■□□□□ 0.13
HPS3-206ENST00000486530 C17orf77Q96MU5 243 aa15.85■□□□□ 0.13
HPS3-206ENST00000486530 TRAV41A0A0B4J266 112 aa15.84■□□□□ 0.13
HPS3-206ENST00000486530 MT-ND6P03923 174 aa15.84■□□□□ 0.13
HPS3-206ENST00000486530 IER3P46695 156 aa15.84■□□□□ 0.13
HPS3-206ENST00000486530 TCL1AP56279 114 aa15.84■□□□□ 0.13
HPS3-206ENST00000486530 C19orf54Q5BKX5 351 aa15.84■□□□□ 0.13
HPS3-206ENST00000486530 GOLT1AQ6ZVE7 132 aa15.84■□□□□ 0.13
HPS3-206ENST00000486530 MRPL18Q9H0U6 180 aaKnown RBP15.84■□□□□ 0.13
HPS3-206ENST00000486530 ZNF492Q9P255 531 aa15.84■□□□□ 0.13
HPS3-206ENST00000486530 TRBV7-1A0A0A6YYK4 115 aa15.84■□□□□ 0.13
HPS3-206ENST00000486530 IZUMO1RA6ND01 250 aa15.84■□□□□ 0.13
HPS3-206ENST00000486530 FABP4P15090 132 aa15.84■□□□□ 0.13
HPS3-206ENST00000486530 TMEM75Q8N9X5 138 aa15.84■□□□□ 0.13
HPS3-206ENST00000486530 OR10D4PQ8NGN7 298 aa15.84■□□□□ 0.13
HPS3-206ENST00000486530 TENM4Q6N022 2769 aa15.83■□□□□ 0.13
HPS3-206ENST00000486530 A6NDX4 124 aa15.83■□□□□ 0.12
HPS3-206ENST00000486530 SNURFLB1AK76 121 aa15.83■□□□□ 0.12
HPS3-206ENST00000486530 K7EQM0 130 aa15.83■□□□□ 0.12
HPS3-206ENST00000486530 CA1P00915 261 aaPredicted RBP15.83■□□□□ 0.12
HPS3-206ENST00000486530 LINC01356Q8N9X3 169 aa15.83■□□□□ 0.12
HPS3-206ENST00000486530 CCDC140Q96MF4 163 aa15.83■□□□□ 0.12
HPS3-206ENST00000486530 HIST1H2BLQ99880 126 aa15.83■□□□□ 0.12
HPS3-206ENST00000486530 BEX4Q9NWD9 120 aaPredicted RBP15.83■□□□□ 0.12
HPS3-206ENST00000486530 CELSR2Q9HCU4 2923 aa15.83■□□□□ 0.12
HPS3-206ENST00000486530 H3BUX3 64 aa15.82■□□□□ 0.12
HPS3-206ENST00000486530 M0QZK8 103 aa15.82■□□□□ 0.12
HPS3-206ENST00000486530 IGLV2-11P01706 119 aa15.82■□□□□ 0.12
HPS3-206ENST00000486530 CLEC3BP05452 202 aa15.82■□□□□ 0.12
HPS3-206ENST00000486530 HIST2H2BCQ6DN03 193 aa15.82■□□□□ 0.12
HPS3-206ENST00000486530 ATP6V0BQ99437 205 aa15.82■□□□□ 0.12
HPS3-206ENST00000486530 AAMDCQ9H7C9 122 aa15.82■□□□□ 0.12
HPS3-206ENST00000486530 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.82■□□□□ 0.12
HPS3-206ENST00000486530 PSG9Q00887 426 aa15.82■□□□□ 0.12
HPS3-206ENST00000486530 DEFB113Q30KQ7 82 aa15.82■□□□□ 0.12
HPS3-206ENST00000486530 TSKUQ8WUA8 353 aa15.82■□□□□ 0.12
HPS3-206ENST00000486530 ZFAND3Q9H8U3 227 aa15.82■□□□□ 0.12
HPS3-206ENST00000486530 SVEP1Q4LDE5 3571 aa15.81■□□□□ 0.12
HPS3-206ENST00000486530 TRAV8-1A0A0A6YYK1 113 aa15.81■□□□□ 0.12
HPS3-206ENST00000486530 PCP4L1A6NKN8 68 aa15.81■□□□□ 0.12
HPS3-206ENST00000486530 FAM223BA6NKX1 122 aa15.81■□□□□ 0.12
HPS3-206ENST00000486530 IGF1P05019 195 aa15.81■□□□□ 0.12
HPS3-206ENST00000486530 CT83Q5H943 113 aa15.81■□□□□ 0.12
HPS3-206ENST00000486530 TOMM20LQ6UXN7 152 aa15.81■□□□□ 0.12
HPS3-206ENST00000486530 FAM223AQ8IWN6 122 aa15.81■□□□□ 0.12
HPS3-206ENST00000486530 PACRGQ96M98 296 aaPredicted RBP15.81■□□□□ 0.12
HPS3-206ENST00000486530 MS4A10Q96PG2 267 aa15.81■□□□□ 0.12
HPS3-206ENST00000486530 NAT8BQ9UHF3 227 aa15.81■□□□□ 0.12
HPS3-206ENST00000486530 CSMD1Q96PZ7 3565 aa15.81■□□□□ 0.12
HPS3-206ENST00000486530 C19orf71A6NCJ1 209 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms