RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 TRAV41A0A0B4J266 112 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 SMIM27A0A1W2PRY6 76 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 TRGC1P0CF51 173 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 ADMP35318 185 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 IBA57Q5T440 356 aaKnown RBP9.33□□□□□ -0.92
PKP4-213ENST00000486254 RASL11AQ6T310 242 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 PRSS57Q6UWY2 283 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 BRD3OSQ6XYD6 125 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 SIGLEC15Q6ZMC9 328 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 BLNKQ8WV28 456 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 MBD6Q96DN6 1003 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 ZNF492Q9P255 531 aa9.33□□□□□ -0.92
PKP4-213ENST00000486254 PTPN13Q12923 2485 aa9.32□□□□□ -0.92
PKP4-213ENST00000486254 PRRC2AP48634 2157 aaKnown RBP9.32□□□□□ -0.92
PKP4-213ENST00000486254 MT-ND6P03923 174 aa9.32□□□□□ -0.92
PKP4-213ENST00000486254 LEMD1Q68G75 181 aa9.32□□□□□ -0.92
PKP4-213ENST00000486254 C9orf139Q6ZV77 190 aa9.32□□□□□ -0.92
PKP4-213ENST00000486254 TMEM75Q8N9X5 138 aa9.32□□□□□ -0.92
PKP4-213ENST00000486254 CMTM2Q8TAZ6 248 aa9.32□□□□□ -0.92
PKP4-213ENST00000486254 ZNF414Q96IQ9 312 aa9.32□□□□□ -0.92
PKP4-213ENST00000486254 RABAC1Q9UI14 185 aa9.32□□□□□ -0.92
PKP4-213ENST00000486254 ANKRD17O75179 2603 aaKnown RBP9.31□□□□□ -0.92
PKP4-213ENST00000486254 A0A087X0K7 114 aa9.31□□□□□ -0.92
PKP4-213ENST00000486254 ZNF320A2RRD8 509 aa9.31□□□□□ -0.92
PKP4-213ENST00000486254 K7EQM0 130 aa9.31□□□□□ -0.92
PKP4-213ENST00000486254 FSHBP01225 129 aa9.31□□□□□ -0.92
PKP4-213ENST00000486254 MEOX2P50222 304 aa9.31□□□□□ -0.92
PKP4-213ENST00000486254 PSG9Q00887 426 aa9.31□□□□□ -0.92
PKP4-213ENST00000486254 RELQ04864 619 aaPredicted RBP9.31□□□□□ -0.92
PKP4-213ENST00000486254 OR5I1Q13606 314 aa9.31□□□□□ -0.92
PKP4-213ENST00000486254 DEFB113Q30KQ7 82 aa9.31□□□□□ -0.92
PKP4-213ENST00000486254 FAM209BQ5JX69 171 aa9.31□□□□□ -0.92
PKP4-213ENST00000486254 C1orf194Q5T5A4 169 aa9.31□□□□□ -0.92
PKP4-213ENST00000486254 CCDC140Q96MF4 163 aa9.31□□□□□ -0.92
PKP4-213ENST00000486254 ZFAND3Q9H8U3 227 aa9.31□□□□□ -0.92
PKP4-213ENST00000486254 FAM231BA6NCW3 169 aa9.3□□□□□ -0.92
PKP4-213ENST00000486254 OR2T8A6NH00 312 aa9.3□□□□□ -0.92
PKP4-213ENST00000486254 AKR1D1P51857 326 aa9.3□□□□□ -0.92
PKP4-213ENST00000486254 WDR73Q6P4I2 378 aa9.3□□□□□ -0.92
PKP4-213ENST00000486254 Q86TA4 180 aa9.3□□□□□ -0.92
PKP4-213ENST00000486254 TMEM183AQ8IXX5 376 aa9.3□□□□□ -0.92
PKP4-213ENST00000486254 USMG5Q96IX5 58 aa9.3□□□□□ -0.92
PKP4-213ENST00000486254 GNB1LQ9BYB4 327 aa9.3□□□□□ -0.92
PKP4-213ENST00000486254 ZFP30Q9Y2G7 519 aa9.3□□□□□ -0.92
PKP4-213ENST00000486254 CREBBPQ92793 2442 aa9.3□□□□□ -0.92
PKP4-213ENST00000486254 G3V318 75 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 H3BUX3 64 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 MGST1P10620 155 aaKnown RBP9.29□□□□□ -0.92
PKP4-213ENST00000486254 HNF1AP20823 631 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 PPIFP30405 207 aaKnown RBP9.29□□□□□ -0.92
PKP4-213ENST00000486254 GNG5P63218 68 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 ATP5G2Q06055 141 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 TMEM219Q86XT9 240 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 OR4B1Q8NGF8 309 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 OR5R1Q8NH85 324 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 WIPF2Q8TF74 440 aaPredicted RBP9.29□□□□□ -0.92
PKP4-213ENST00000486254 NRGNQ92686 78 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 GRAMD2BQ96HH9 432 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 LINC00479Q96M42 142 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 PRSS22Q9GZN4 317 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 AAMDCQ9H7C9 122 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 USP9YO00507 2555 aaPredicted RBP9.29□□□□□ -0.92
PKP4-213ENST00000486254 IGHV3OR16-10A0A075B7F0 116 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 C19orf71A6NCJ1 209 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 NPIPB6E9PJ23 425 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 SLC17A3O00476 420 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 IGLV2-11P01706 119 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 GPR183P32249 361 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 NDUFA6P56556 154 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 COX8CQ7Z4L0 72 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 HIST3H2BBQ8N257 126 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 GFRA4Q9GZZ7 299 aa9.29□□□□□ -0.92
PKP4-213ENST00000486254 RNASE7Q9H1E1 156 aaKnown RBP9.29□□□□□ -0.92
PKP4-213ENST00000486254 SOX21Q9Y651 276 aaPredicted RBP9.29□□□□□ -0.92
PKP4-213ENST00000486254 TRAV34A0A0B4J273 112 aa9.28□□□□□ -0.92
PKP4-213ENST00000486254 TMEM89A2RUT3 159 aa9.28□□□□□ -0.92
PKP4-213ENST00000486254 IZUMO1RA6ND01 250 aa9.28□□□□□ -0.92
PKP4-213ENST00000486254 LINC01548A6NM66 108 aa9.28□□□□□ -0.92
PKP4-213ENST00000486254 ZNF705GA8MUZ8 300 aaPredicted RBP9.28□□□□□ -0.92
PKP4-213ENST00000486254 GATCO43716 136 aaKnown RBP9.28□□□□□ -0.92
PKP4-213ENST00000486254 AVPP01185 164 aa9.28□□□□□ -0.92
PKP4-213ENST00000486254 CLEC3BP05452 202 aa9.28□□□□□ -0.92
PKP4-213ENST00000486254 TOMM20LQ6UXN7 152 aa9.28□□□□□ -0.92
PKP4-213ENST00000486254 ATP5L2Q7Z4Y8 100 aa9.28□□□□□ -0.92
PKP4-213ENST00000486254 TSKUQ8WUA8 353 aa9.28□□□□□ -0.92
PKP4-213ENST00000486254 TRAPPC1Q9Y5R8 145 aa9.28□□□□□ -0.92
PKP4-213ENST00000486254 S4R3C0 116 aa9.28□□□□□ -0.92
PKP4-213ENST00000486254 U3KQE9 123 aa9.28□□□□□ -0.92
PKP4-213ENST00000486254 NAV2Q8IVL1 2488 aa9.27□□□□□ -0.93
PKP4-213ENST00000486254 A1L4Q6 167 aa9.27□□□□□ -0.93
PKP4-213ENST00000486254 BUB3O43684 328 aa9.27□□□□□ -0.93
PKP4-213ENST00000486254 HLA-DQA1P01909 254 aa9.27□□□□□ -0.93
PKP4-213ENST00000486254 CSN1S1P47710 185 aa9.27□□□□□ -0.93
PKP4-213ENST00000486254 CFHR3Q02985 330 aa9.27□□□□□ -0.93
PKP4-213ENST00000486254 DNLZQ5SXM8 178 aa9.27□□□□□ -0.93
PKP4-213ENST00000486254 C16orf54Q6UWD8 224 aa9.27□□□□□ -0.93
PKP4-213ENST00000486254 OR8I2Q8N0Y5 310 aa9.27□□□□□ -0.93
PKP4-213ENST00000486254 NUDT10Q8NFP7 164 aa9.27□□□□□ -0.93
PKP4-213ENST00000486254 NUDT11Q96G61 164 aa9.27□□□□□ -0.93
PKP4-213ENST00000486254 PRDM13Q9H4Q3 707 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms