RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 RBPMS2Q6ZRY4 209 aaKnown RBP4.26□□□□□ -1.73
COPS3-208ENST00000486032 ZNF575Q86XF7 245 aa4.26□□□□□ -1.73
COPS3-208ENST00000486032 OR2G3Q8NGZ4 309 aa4.26□□□□□ -1.73
COPS3-208ENST00000486032 ST8SIA2Q92186 375 aa4.26□□□□□ -1.73
COPS3-208ENST00000486032 RNF2Q99496 336 aa4.26□□□□□ -1.73
COPS3-208ENST00000486032 MCRIP2Q9BUT9 160 aaKnown RBP4.26□□□□□ -1.73
COPS3-208ENST00000486032 KRTAP3-1Q9BYR8 98 aa4.26□□□□□ -1.73
COPS3-208ENST00000486032 SH3BGRL3Q9H299 93 aa4.26□□□□□ -1.73
COPS3-208ENST00000486032 ARV1Q9H2C2 271 aa4.26□□□□□ -1.73
COPS3-208ENST00000486032 SLC25A32Q9H2D1 315 aa4.26□□□□□ -1.73
COPS3-208ENST00000486032 MRPL27Q9P0M9 148 aaKnown RBP4.26□□□□□ -1.73
COPS3-208ENST00000486032 MLXQ9UH92 298 aa4.26□□□□□ -1.73
COPS3-208ENST00000486032 SMPXQ9UHP9 88 aa4.26□□□□□ -1.73
COPS3-208ENST00000486032 HIGD1AQ9Y241 93 aa4.26□□□□□ -1.73
COPS3-208ENST00000486032 LSM4Q9Y4Z0 139 aaKnown RBP4.26□□□□□ -1.73
COPS3-208ENST00000486032 MGAM2Q2M2H8 2515 aa4.26□□□□□ -1.73
COPS3-208ENST00000486032 TRAV5A0A0B4J249 113 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 IZUMO1RA6ND01 250 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 ZNF785A8K8V0 405 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 A8MWP6 167 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 H3BRN7 92 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 K7EMT4 169 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 HMGB3O15347 200 aaKnown RBP4.25□□□□□ -1.73
COPS3-208ENST00000486032 JTBO76095 146 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 CFDP00746 253 aaPredicted RBP4.25□□□□□ -1.73
COPS3-208ENST00000486032 PRB2P02812 416 aaPredicted RBP4.25□□□□□ -1.73
COPS3-208ENST00000486032 BMI1P35226 326 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 RAB2AP61019 212 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 ZNF345Q14585 488 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 DEFB114Q30KQ6 69 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 ACOT6Q3I5F7 207 aaPredicted RBP4.25□□□□□ -1.73
COPS3-208ENST00000486032 CD300EQ496F6 205 aaPredicted RBP4.25□□□□□ -1.73
COPS3-208ENST00000486032 FAM78BQ5VT40 261 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 C10orf113Q5VZT2 155 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 SPATA31B1PQ5VZV4 182 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 TCF24Q7RTU0 167 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 LINC00305Q7Z4B0 112 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 OR8I2Q8N0Y5 310 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 C9orf62Q8N4C0 152 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 WFDC9Q8NEX5 89 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 STXBP6Q8NFX7 210 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 OR1L4Q8NGR5 311 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 MARC2Q969Z3 335 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 GRAMD2BQ96HH9 432 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 PRR25Q96S07 402 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 SCRT1Q9BWW7 348 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 SLC25A39Q9BZJ4 359 aaPredicted RBP4.25□□□□□ -1.73
COPS3-208ENST00000486032 TMEM231Q9H6L2 316 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 VSIRQ9H7M9 311 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 DNAJC4Q9NNZ3 241 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 CYTL1Q9NRR1 136 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 KCNIP2Q9NS61 270 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 C11orf21Q9P2W6 132 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 PFDN2Q9UHV9 154 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 TNFRSF18Q9Y5U5 241 aa4.25□□□□□ -1.73
COPS3-208ENST00000486032 A0A1W2PPV4 95 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 ZNF98A6NK75 572 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 H3BTX0 84 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 DNASE2O00115 360 aaPredicted RBP4.24□□□□□ -1.73
COPS3-208ENST00000486032 IGLV1-51P01701 117 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 TPT1P13693 172 aaKnown RBP4.24□□□□□ -1.73
COPS3-208ENST00000486032 GP9P14770 177 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 C4BPBP20851 252 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 CRYBB3P26998 211 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 S100A7P31151 101 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 AKR1C8PQ5T2L2 129 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 MORN5Q5VZ52 161 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 LAMTOR1Q6IAA8 161 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 C16orf54Q6UWD8 224 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 MIR17HGQ75NE6 70 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 S100A7AQ86SG5 101 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 IQCF2Q8IXL9 164 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 TMEM61Q8N0U2 210 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 OR10G4Q8NGN3 311 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 OR10G9Q8NGN4 311 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 OR10G7Q8NGN6 311 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 TMEM37Q8WXS4 190 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 GNPNAT1Q96EK6 184 aaPredicted RBP4.24□□□□□ -1.73
COPS3-208ENST00000486032 PFDN5Q99471 154 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 PARD6GQ9BYG4 376 aaPredicted RBP4.24□□□□□ -1.73
COPS3-208ENST00000486032 GPR61Q9BZJ8 451 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 TECRQ9NZ01 308 aaKnown RBP4.24□□□□□ -1.73
COPS3-208ENST00000486032 UBQLN2Q9UHD9 624 aa4.24□□□□□ -1.73
COPS3-208ENST00000486032 HUWE1Q7Z6Z7 4374 aaKnown RBP4.23□□□□□ -1.73
COPS3-208ENST00000486032 A0A1B0GV50 99 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 BUB3O43684 328 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 C8orf88P0DMB2 117 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 PYYP10082 97 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 PRB4P10163 310 aaPredicted RBP4.23□□□□□ -1.73
COPS3-208ENST00000486032 ATF4P18848 351 aaPredicted RBP4.23□□□□□ -1.73
COPS3-208ENST00000486032 M6PRP20645 277 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 GALR1P47211 349 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 INSL3P51460 131 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 PLP1P60201 277 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 EIF5AP63241 154 aaKnown RBP4.23□□□□□ -1.73
COPS3-208ENST00000486032 PAFAH1B2P68402 229 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 PXDC1Q5TGL8 231 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 IGFL4Q6B9Z1 124 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 LCN12Q6JVE5 192 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 SIGLEC15Q6ZMC9 328 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms