RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 ADAP1O75689 374 aa12.25□□□□□ -0.45
SMC4-216ENST00000485645 ORM2P19652 201 aa12.25□□□□□ -0.45
SMC4-216ENST00000485645 GATA2P23769 480 aaPredicted RBP12.25□□□□□ -0.45
SMC4-216ENST00000485645 S100A7P31151 101 aa12.25□□□□□ -0.45
SMC4-216ENST00000485645 AKR1C1Q04828 323 aa12.25□□□□□ -0.45
SMC4-216ENST00000485645 LINC00336Q6ZUF6 198 aa12.25□□□□□ -0.45
SMC4-216ENST00000485645 RSG1Q9BU20 258 aa12.25□□□□□ -0.45
SMC4-216ENST00000485645 TMEM147Q9BVK8 224 aa12.25□□□□□ -0.45
SMC4-216ENST00000485645 DOK5Q9P104 306 aa12.25□□□□□ -0.45
SMC4-216ENST00000485645 DKK2Q9UBU2 259 aa12.25□□□□□ -0.45
SMC4-216ENST00000485645 STRAPQ9Y3F4 350 aaKnown RBP12.25□□□□□ -0.45
SMC4-216ENST00000485645 FAT2Q9NYQ8 4349 aa12.25□□□□□ -0.45
SMC4-216ENST00000485645 DNAH17Q9UFH2 4485 aa12.24□□□□□ -0.45
SMC4-216ENST00000485645 IFNA21P01568 189 aa12.24□□□□□ -0.45
SMC4-216ENST00000485645 HBE1P02100 147 aa12.24□□□□□ -0.45
SMC4-216ENST00000485645 ZNF846Q147U1 533 aa12.24□□□□□ -0.45
SMC4-216ENST00000485645 FAM222AQ5U5X8 452 aa12.24□□□□□ -0.45
SMC4-216ENST00000485645 C1orf158Q8N1D5 194 aa12.24□□□□□ -0.45
SMC4-216ENST00000485645 OR4D5Q8NGN0 318 aa12.24□□□□□ -0.45
SMC4-216ENST00000485645 OR1B1Q8NGR6 318 aa12.24□□□□□ -0.45
SMC4-216ENST00000485645 MITD1Q8WV92 249 aa12.24□□□□□ -0.45
SMC4-216ENST00000485645 C20orf173Q96LM9 149 aa12.24□□□□□ -0.45
SMC4-216ENST00000485645 GPR82Q96P67 336 aa12.24□□□□□ -0.45
SMC4-216ENST00000485645 NIPSNAP3BQ9BS92 247 aa12.24□□□□□ -0.45
SMC4-216ENST00000485645 H3BP45 60 aa12.23□□□□□ -0.45
SMC4-216ENST00000485645 ASAH1Q13510 395 aa12.23□□□□□ -0.45
SMC4-216ENST00000485645 MZT2BQ6NZ67 158 aa12.23□□□□□ -0.45
SMC4-216ENST00000485645 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.23□□□□□ -0.45
SMC4-216ENST00000485645 TMEM182Q6ZP80 229 aaPredicted RBP12.23□□□□□ -0.45
SMC4-216ENST00000485645 ACOT7LQ6ZUV0 252 aa12.23□□□□□ -0.45
SMC4-216ENST00000485645 FAM210BQ96KR6 192 aa12.23□□□□□ -0.45
SMC4-216ENST00000485645 NUDT15Q9NV35 164 aa12.23□□□□□ -0.45
SMC4-216ENST00000485645 TRAV6A0A075B6T7 132 aa12.22□□□□□ -0.45
SMC4-216ENST00000485645 LOC102723971A0A1B0GUV8 181 aa12.22□□□□□ -0.45
SMC4-216ENST00000485645 UPK1BO75841 260 aa12.22□□□□□ -0.45
SMC4-216ENST00000485645 RRN3P1Q2M238 152 aa12.22□□□□□ -0.45
SMC4-216ENST00000485645 TMEM144Q7Z5S9 345 aa12.22□□□□□ -0.45
SMC4-216ENST00000485645 C17orf77Q96MU5 243 aa12.22□□□□□ -0.45
SMC4-216ENST00000485645 FAM240BA0A1B0GVZ2 78 aa12.21□□□□□ -0.45
SMC4-216ENST00000485645 SMCO3A2RU48 225 aa12.21□□□□□ -0.45
SMC4-216ENST00000485645 A8MTW9 85 aa12.21□□□□□ -0.45
SMC4-216ENST00000485645 H2AFB2P0C5Z0 115 aa12.21□□□□□ -0.45
SMC4-216ENST00000485645 POLR2GP62487 172 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMC4-216ENST00000485645 ID3Q02535 119 aa12.21□□□□□ -0.45
SMC4-216ENST00000485645 OXA1LQ15070 435 aa12.21□□□□□ -0.45
SMC4-216ENST00000485645 IGF2BP2-AS1Q96M15 143 aa12.21□□□□□ -0.45
SMC4-216ENST00000485645 TMEM208Q9BTX3 173 aa12.21□□□□□ -0.45
SMC4-216ENST00000485645 PSENENQ9NZ42 101 aa12.21□□□□□ -0.45
SMC4-216ENST00000485645 PLA2G2EQ9NZK7 142 aa12.21□□□□□ -0.45
SMC4-216ENST00000485645 YTHDF2Q9Y5A9 579 aaKnown RBP12.21□□□□□ -0.45
SMC4-216ENST00000485645 M0R2N4 97 aa12.2□□□□□ -0.46
SMC4-216ENST00000485645 DUSP14O95147 198 aaKnown RBP12.2□□□□□ -0.46
SMC4-216ENST00000485645 IL5P05113 134 aa12.2□□□□□ -0.46
SMC4-216ENST00000485645 HTN3P15516 51 aa12.2□□□□□ -0.46
SMC4-216ENST00000485645 RAP2BP61225 183 aa12.2□□□□□ -0.46
SMC4-216ENST00000485645 AMTNQ6UX39 209 aa12.2□□□□□ -0.46
SMC4-216ENST00000485645 CYP2G1PQ6ZSU1 146 aa12.2□□□□□ -0.46
SMC4-216ENST00000485645 UBE2DNLQ8IWF7 75 aa12.2□□□□□ -0.46
SMC4-216ENST00000485645 KRTAP17-1Q9BYP8 105 aa12.2□□□□□ -0.46
SMC4-216ENST00000485645 H3BRN7 92 aa12.19□□□□□ -0.46
SMC4-216ENST00000485645 CNN1P51911 297 aaKnown RBP12.19□□□□□ -0.46
SMC4-216ENST00000485645 FGL1Q08830 312 aa12.19□□□□□ -0.46
SMC4-216ENST00000485645 IAH1Q2TAA2 248 aaPredicted RBP12.19□□□□□ -0.46
SMC4-216ENST00000485645 IGFL4Q6B9Z1 124 aa12.19□□□□□ -0.46
SMC4-216ENST00000485645 ZNF431Q8TF32 576 aaPredicted RBP12.19□□□□□ -0.46
SMC4-216ENST00000485645 SLC25A39Q9BZJ4 359 aaPredicted RBP12.19□□□□□ -0.46
SMC4-216ENST00000485645 HIGD1AQ9Y241 93 aa12.19□□□□□ -0.46
SMC4-216ENST00000485645 TRAV8-2A0A0B4J237 113 aa12.18□□□□□ -0.46
SMC4-216ENST00000485645 DAD1P61803 113 aa12.18□□□□□ -0.46
SMC4-216ENST00000485645 IFITM3Q01628 133 aa12.18□□□□□ -0.46
SMC4-216ENST00000485645 LGALS9BQ3B8N2 356 aa12.18□□□□□ -0.46
SMC4-216ENST00000485645 OR11H7Q8NGC8 314 aa12.18□□□□□ -0.46
SMC4-216ENST00000485645 SMIM8Q96KF7 97 aa12.18□□□□□ -0.46
SMC4-216ENST00000485645 SEC22CQ9BRL7 303 aa12.18□□□□□ -0.46
SMC4-216ENST00000485645 SHANK2-AS3Q9BTD1 123 aa12.18□□□□□ -0.46
SMC4-216ENST00000485645 KIAA1109Q2LD37 5005 aa12.18□□□□□ -0.46
SMC4-216ENST00000485645 PMS2P5A8MQ11 134 aa12.17□□□□□ -0.46
SMC4-216ENST00000485645 SSSCA1O60232 199 aa12.17□□□□□ -0.46
SMC4-216ENST00000485645 HYPMO75409 117 aa12.17□□□□□ -0.46
SMC4-216ENST00000485645 INSP01308 110 aa12.17□□□□□ -0.46
SMC4-216ENST00000485645 OR5G3P0C626 314 aa12.17□□□□□ -0.46
SMC4-216ENST00000485645 RPL7P18124 248 aaKnown RBP12.17□□□□□ -0.46
SMC4-216ENST00000485645 SELENOTP62341 195 aa12.17□□□□□ -0.46
SMC4-216ENST00000485645 SPINK13Q1W4C9 94 aa12.17□□□□□ -0.46
SMC4-216ENST00000485645 S100A7AQ86SG5 101 aa12.17□□□□□ -0.46
SMC4-216ENST00000485645 RNF182Q8N6D2 247 aa12.17□□□□□ -0.46
SMC4-216ENST00000485645 ZBTB8BQ8NAP8 495 aaPredicted RBP12.17□□□□□ -0.46
SMC4-216ENST00000485645 PKHD1P08F94 4074 aa12.16□□□□□ -0.46
SMC4-216ENST00000485645 A0A1B0GVY2 172 aa12.16□□□□□ -0.46
SMC4-216ENST00000485645 PRSS29PA6NIE9 313 aa12.16□□□□□ -0.46
SMC4-216ENST00000485645 M0R2Z0 102 aa12.16□□□□□ -0.46
SMC4-216ENST00000485645 LINC00869P0C866 280 aa12.16□□□□□ -0.46
SMC4-216ENST00000485645 PLP1P60201 277 aa12.16□□□□□ -0.46
SMC4-216ENST00000485645 B2MP61769 119 aa12.16□□□□□ -0.46
SMC4-216ENST00000485645 RRAS2P62070 204 aaPredicted RBP12.16□□□□□ -0.46
SMC4-216ENST00000485645 DLK1P80370 383 aa12.16□□□□□ -0.46
SMC4-216ENST00000485645 C12orf45Q8N5I9 185 aaPredicted RBP12.16□□□□□ -0.46
SMC4-216ENST00000485645 ZNF738Q8NE65 137 aa12.16□□□□□ -0.46
SMC4-216ENST00000485645 ENKURQ8TC29 256 aa12.16□□□□□ -0.46
SMC4-216ENST00000485645 NPVFQ9HCQ7 196 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms