RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 PFDN2Q9UHV9 154 aa11.93□□□□□ -0.5
APOE-205ENST00000485628 IGHV3OR16-13A0A075B7E8 117 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 IGHV3-74A0A0B4J1X5 117 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 CD5P06127 495 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 STAG3L2P0CL84 134 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 STAG3L3P0CL85 134 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 CD33P20138 364 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 RAB5CP51148 216 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 RHOBP62745 196 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 C9orf66Q5T8R8 295 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 LEMD1Q68G75 181 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 OR2K2Q8NGT1 345 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 SUN5Q8TC36 379 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 MBD3L1Q8WWY6 194 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 RAB24Q969Q5 203 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 GPR82Q96P67 336 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 RNF24Q9Y225 148 aa11.92□□□□□ -0.5
APOE-205ENST00000485628 TRAV25A0A0B4J276 109 aa11.91□□□□□ -0.5
APOE-205ENST00000485628 IGHV3-66A0A0C4DH42 116 aa11.91□□□□□ -0.5
APOE-205ENST00000485628 GP9P14770 177 aa11.91□□□□□ -0.5
APOE-205ENST00000485628 FHITP49789 147 aa11.91□□□□□ -0.5
APOE-205ENST00000485628 IFITM2Q01629 132 aa11.91□□□□□ -0.5
APOE-205ENST00000485628 CD300EQ496F6 205 aaPredicted RBP11.91□□□□□ -0.5
APOE-205ENST00000485628 AKR1C8PQ5T2L2 129 aa11.91□□□□□ -0.5
APOE-205ENST00000485628 TMEM231Q9H6L2 316 aa11.91□□□□□ -0.5
APOE-205ENST00000485628 A0A087X0K7 114 aa11.9□□□□□ -0.5
APOE-205ENST00000485628 ZNF785A8K8V0 405 aa11.9□□□□□ -0.5
APOE-205ENST00000485628 TSPAN4O14817 238 aa11.9□□□□□ -0.5
APOE-205ENST00000485628 SAP30O75446 220 aa11.9□□□□□ -0.5
APOE-205ENST00000485628 IGLC2P0DOY2 106 aa11.9□□□□□ -0.5
APOE-205ENST00000485628 IGLL1P15814 213 aa11.9□□□□□ -0.5
APOE-205ENST00000485628 RPL7P18124 248 aaKnown RBP11.9□□□□□ -0.5
APOE-205ENST00000485628 BMI1P35226 326 aa11.9□□□□□ -0.5
APOE-205ENST00000485628 CDC34P49427 236 aaPredicted RBP11.9□□□□□ -0.5
APOE-205ENST00000485628 FAM122CQ6P4D5 195 aa11.9□□□□□ -0.5
APOE-205ENST00000485628 ALKAL2Q6UX46 152 aa11.9□□□□□ -0.5
APOE-205ENST00000485628 TMEM61Q8N0U2 210 aa11.9□□□□□ -0.5
APOE-205ENST00000485628 ZNF680Q8NEM1 530 aa11.9□□□□□ -0.5
APOE-205ENST00000485628 GRAMD2BQ96HH9 432 aa11.9□□□□□ -0.5
APOE-205ENST00000485628 NARS2Q96I59 477 aaKnown RBP11.9□□□□□ -0.5
APOE-205ENST00000485628 SORL1Q92673 2214 aa11.9□□□□□ -0.51
APOE-205ENST00000485628 TRAV1-1A0A0B4J248 108 aa11.89□□□□□ -0.51
APOE-205ENST00000485628 CTXND1A0A1B0GTU2 59 aa11.89□□□□□ -0.51
APOE-205ENST00000485628 IZUMO1RA6ND01 250 aa11.89□□□□□ -0.51
APOE-205ENST00000485628 FAM74A1Q5RGS3 127 aa11.89□□□□□ -0.51
APOE-205ENST00000485628 SIGLEC15Q6ZMC9 328 aa11.89□□□□□ -0.51
APOE-205ENST00000485628 TCF24Q7RTU0 167 aa11.89□□□□□ -0.51
APOE-205ENST00000485628 OR8I2Q8N0Y5 310 aa11.89□□□□□ -0.51
APOE-205ENST00000485628 DCANP1Q8TF63 244 aa11.89□□□□□ -0.51
APOE-205ENST00000485628 SAT2Q96F10 170 aaPredicted RBP11.89□□□□□ -0.51
APOE-205ENST00000485628 ACTR3CQ9C0K3 210 aaPredicted RBP11.89□□□□□ -0.51
APOE-205ENST00000485628 ZNF256Q9Y2P7 627 aaPredicted RBP11.89□□□□□ -0.51
APOE-205ENST00000485628 MGAM2Q2M2H8 2515 aa11.88□□□□□ -0.51
APOE-205ENST00000485628 TRAV2A0A0B4J234 112 aa11.88□□□□□ -0.51
APOE-205ENST00000485628 A0A1W2PPV4 95 aa11.88□□□□□ -0.51
APOE-205ENST00000485628 SOCS3O14543 225 aa11.88□□□□□ -0.51
APOE-205ENST00000485628 EGFEM1PQ0D2K5 195 aa11.88□□□□□ -0.51
APOE-205ENST00000485628 PQLC2Q6ZP29 291 aa11.88□□□□□ -0.51
APOE-205ENST00000485628 BPIFA4PQ86YQ2 179 aa11.88□□□□□ -0.51
APOE-205ENST00000485628 LYPD6BQ8NI32 183 aa11.88□□□□□ -0.51
APOE-205ENST00000485628 FXYD5Q96DB9 178 aa11.88□□□□□ -0.51
APOE-205ENST00000485628 HRH4Q9H3N8 390 aa11.88□□□□□ -0.51
APOE-205ENST00000485628 SLC25A22Q9H936 323 aa11.88□□□□□ -0.51
APOE-205ENST00000485628 HELTA6NFD8 242 aa11.87□□□□□ -0.51
APOE-205ENST00000485628 H3BQ15 152 aa11.87□□□□□ -0.51
APOE-205ENST00000485628 EIF3GO75821 320 aaKnown RBP eCLIP11.87□□□□□ -0.51
APOE-205ENST00000485628 HIST1H1EP10412 219 aaKnown RBP11.87□□□□□ -0.51
APOE-205ENST00000485628 TAS2R45P59539 299 aa11.87□□□□□ -0.51
APOE-205ENST00000485628 BEAN1Q3B7T3 259 aa11.87□□□□□ -0.51
APOE-205ENST00000485628 KHDC3LQ587J8 217 aa11.87□□□□□ -0.51
APOE-205ENST00000485628 SAMD5Q5TGI4 173 aa11.87□□□□□ -0.51
APOE-205ENST00000485628 STXBP6Q8NFX7 210 aa11.87□□□□□ -0.51
APOE-205ENST00000485628 RNF141Q8WVD5 230 aa11.87□□□□□ -0.51
APOE-205ENST00000485628 OR51M1Q9H341 326 aa11.87□□□□□ -0.51
APOE-205ENST00000485628 ZNF586Q9NXT0 402 aa11.87□□□□□ -0.51
APOE-205ENST00000485628 K7EQG2 157 aa11.86□□□□□ -0.51
APOE-205ENST00000485628 PYYP10082 97 aa11.86□□□□□ -0.51
APOE-205ENST00000485628 GALR1P47211 349 aa11.86□□□□□ -0.51
APOE-205ENST00000485628 OXLD1Q5BKU9 147 aa11.86□□□□□ -0.51
APOE-205ENST00000485628 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.86□□□□□ -0.51
APOE-205ENST00000485628 FAM213BQ8TBF2 198 aa11.86□□□□□ -0.51
APOE-205ENST00000485628 DYNLRB2Q8TF09 96 aa11.86□□□□□ -0.51
APOE-205ENST00000485628 SPAG8Q99932 426 aaPredicted RBP11.86□□□□□ -0.51
APOE-205ENST00000485628 GPR61Q9BZJ8 451 aa11.86□□□□□ -0.51
APOE-205ENST00000485628 MS4A6AQ9H2W1 248 aa11.86□□□□□ -0.51
APOE-205ENST00000485628 NRN1Q9NPD7 142 aa11.86□□□□□ -0.51
APOE-205ENST00000485628 SELENOKQ9Y6D0 94 aa11.86□□□□□ -0.51
APOE-205ENST00000485628 TRBV19A0A075B6N1 114 aa11.85□□□□□ -0.51
APOE-205ENST00000485628 ZNF253O75346 499 aa11.85□□□□□ -0.51
APOE-205ENST00000485628 NDUFB4O95168 129 aa11.85□□□□□ -0.51
APOE-205ENST00000485628 ARL14EPLP0DKL9 152 aa11.85□□□□□ -0.51
APOE-205ENST00000485628 MEOX2P50222 304 aa11.85□□□□□ -0.51
APOE-205ENST00000485628 PMS2P11Q13670 270 aa11.85□□□□□ -0.51
APOE-205ENST00000485628 PAXXQ9BUH6 204 aa11.85□□□□□ -0.51
APOE-205ENST00000485628 MAP1LC3B2A6NCE7 125 aa11.84□□□□□ -0.51
APOE-205ENST00000485628 HMGB3O15347 200 aaKnown RBP11.84□□□□□ -0.51
APOE-205ENST00000485628 CXorf1O96002 111 aa11.84□□□□□ -0.51
APOE-205ENST00000485628 IFNA7P01567 189 aa11.84□□□□□ -0.51
APOE-205ENST00000485628 NBEAP1P0C6P0 100 aa11.84□□□□□ -0.51
APOE-205ENST00000485628 GCHFRP30047 84 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms