RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 OR4F17Q8NGA8 305 aa7.39□□□□□ -1.23
CTSA-208ENST00000485627 OR4X2Q8NGF9 303 aa7.39□□□□□ -1.23
CTSA-208ENST00000485627 FAM167A-AS1Q96KT0 104 aa7.39□□□□□ -1.23
CTSA-208ENST00000485627 SHANK2-AS3Q9BTD1 123 aa7.39□□□□□ -1.23
CTSA-208ENST00000485627 CARHSP1Q9Y2V2 147 aaKnown RBP7.39□□□□□ -1.23
CTSA-208ENST00000485627 FAM74A7A6NL05 159 aa7.38□□□□□ -1.23
CTSA-208ENST00000485627 PPP5D1E7EU14 171 aa7.38□□□□□ -1.23
CTSA-208ENST00000485627 TMEM250H0YL14 139 aa7.38□□□□□ -1.23
CTSA-208ENST00000485627 RNASE1P07998 156 aaKnown RBP7.38□□□□□ -1.23
CTSA-208ENST00000485627 PYYP10082 97 aa7.38□□□□□ -1.23
CTSA-208ENST00000485627 PSMB8P28062 276 aa7.38□□□□□ -1.23
CTSA-208ENST00000485627 CD81P60033 236 aa7.38□□□□□ -1.23
CTSA-208ENST00000485627 SRSF2Q01130 221 aaKnown RBP7.38□□□□□ -1.23
CTSA-208ENST00000485627 KIAA0141Q14154 515 aaPredicted RBP7.38□□□□□ -1.23
CTSA-208ENST00000485627 USF2Q15853 346 aaPredicted RBP7.38□□□□□ -1.23
CTSA-208ENST00000485627 LEMD1Q68G75 181 aa7.38□□□□□ -1.23
CTSA-208ENST00000485627 ZNF343Q6P1L6 599 aa7.38□□□□□ -1.23
CTSA-208ENST00000485627 TOMM20LQ6UXN7 152 aa7.38□□□□□ -1.23
CTSA-208ENST00000485627 LCNL1Q6ZST4 164 aa7.38□□□□□ -1.23
CTSA-208ENST00000485627 METTL26Q96S19 204 aa7.38□□□□□ -1.23
CTSA-208ENST00000485627 NKX6-2Q9C056 277 aaPredicted RBP7.38□□□□□ -1.23
CTSA-208ENST00000485627 ESM1Q9NQ30 184 aa7.38□□□□□ -1.23
CTSA-208ENST00000485627 PEF1Q9UBV8 284 aaKnown RBP7.38□□□□□ -1.23
CTSA-208ENST00000485627 A0A1W2PRE2 83 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 ZNF98A6NK75 572 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 NDUFA4O00483 81 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 GGCTO75223 188 aaKnown RBP7.37□□□□□ -1.23
CTSA-208ENST00000485627 SNAPINO95295 136 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 NBEAP1P0C6P0 100 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 ADCYAP1P18509 176 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 ATP5G3P48201 142 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 HILS1P60008 231 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 C10orf91Q5T1B1 145 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 Q6ZSV7 163 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 BLNKQ8WV28 456 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 ZNF503Q96F45 646 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 NIPSNAP3BQ9BS92 247 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 C20orf24Q9BUV8 137 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 TMEM14CQ9P0S9 112 aa7.37□□□□□ -1.23
CTSA-208ENST00000485627 YTHDF2Q9Y5A9 579 aaKnown RBP7.37□□□□□ -1.23
CTSA-208ENST00000485627 ANK3Q12955 4377 aaKnown RBP7.37□□□□□ -1.23
CTSA-208ENST00000485627 ZNF727A8MUV8 499 aa7.36□□□□□ -1.23
CTSA-208ENST00000485627 M0R036 132 aa7.36□□□□□ -1.23
CTSA-208ENST00000485627 HIST1H1EP10412 219 aaKnown RBP7.36□□□□□ -1.23
CTSA-208ENST00000485627 RPL7P18124 248 aaKnown RBP7.36□□□□□ -1.23
CTSA-208ENST00000485627 NPPCP23582 126 aa7.36□□□□□ -1.23
CTSA-208ENST00000485627 SUMO1P63165 101 aaKnown RBP7.36□□□□□ -1.23
CTSA-208ENST00000485627 ZNF674Q2M3X9 581 aa7.36□□□□□ -1.23
CTSA-208ENST00000485627 FAM106AQ4KMX7 169 aa7.36□□□□□ -1.23
CTSA-208ENST00000485627 FAM74A3Q4VXF1 159 aa7.36□□□□□ -1.23
CTSA-208ENST00000485627 OR8I2Q8N0Y5 310 aa7.36□□□□□ -1.23
CTSA-208ENST00000485627 KLHDC1Q8N7A1 406 aa7.36□□□□□ -1.23
CTSA-208ENST00000485627 RPUSD4Q96CM3 377 aaKnown RBP7.36□□□□□ -1.23
CTSA-208ENST00000485627 FXYD5Q96DB9 178 aa7.36□□□□□ -1.23
CTSA-208ENST00000485627 OR5B12Q96R08 314 aa7.36□□□□□ -1.23
CTSA-208ENST00000485627 SERTAD4Q9NUC0 356 aa7.36□□□□□ -1.23
CTSA-208ENST00000485627 IGHV3OR16-8A0A075B7F1 116 aa7.35□□□□□ -1.23
CTSA-208ENST00000485627 GP9P14770 177 aa7.35□□□□□ -1.23
CTSA-208ENST00000485627 RANP62826 216 aaKnown RBP7.35□□□□□ -1.23
CTSA-208ENST00000485627 GUCA2BQ16661 112 aa7.35□□□□□ -1.23
CTSA-208ENST00000485627 RPEL1Q2QD12 228 aa7.35□□□□□ -1.23
CTSA-208ENST00000485627 KHDC1LQ5JSQ8 128 aa7.35□□□□□ -1.23
CTSA-208ENST00000485627 FAM90A2PQ658T7 463 aa7.35□□□□□ -1.23
CTSA-208ENST00000485627 C10orf99Q6UWK7 81 aa7.35□□□□□ -1.23
CTSA-208ENST00000485627 UBE2E2Q96LR5 201 aa7.35□□□□□ -1.23
CTSA-208ENST00000485627 GPR82Q96P67 336 aa7.35□□□□□ -1.23
CTSA-208ENST00000485627 SMIM7Q9BQ49 75 aa7.35□□□□□ -1.23
CTSA-208ENST00000485627 SCO2A0A1W2PP80 73 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 A0A1W2PS18 150 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 ZNF320A2RRD8 509 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 PGPA6NDG6 321 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 H3BQ15 152 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 ZNF207O43670 478 aaKnown RBP7.34□□□□□ -1.23
CTSA-208ENST00000485627 TCF21O43680 179 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 NDUFB4O95168 129 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 TRBV12-3P01733 135 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 SNRPCP09234 159 aaKnown RBP7.34□□□□□ -1.23
CTSA-208ENST00000485627 LGALS1P09382 135 aaKnown RBP7.34□□□□□ -1.23
CTSA-208ENST00000485627 BMI1P35226 326 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 GALR1P47211 349 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 KRTAP24-1Q3LI83 254 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 C1orf194Q5T5A4 169 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 RNF152Q8N8N0 203 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 CLRN3Q8NCR9 226 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 TMEM190Q8WZ59 177 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 TMEM158Q8WZ71 300 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 TVP23CQ96ET8 276 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 GRAMD2BQ96HH9 432 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 TCEAL7Q9BRU2 100 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 PARLQ9H300 379 aa7.34□□□□□ -1.23
CTSA-208ENST00000485627 TRBV19A0A075B6N1 114 aa7.33□□□□□ -1.24
CTSA-208ENST00000485627 ZNF785A8K8V0 405 aa7.33□□□□□ -1.24
CTSA-208ENST00000485627 H3BTX0 84 aa7.33□□□□□ -1.24
CTSA-208ENST00000485627 SLC25A5P05141 298 aaKnown RBP7.33□□□□□ -1.24
CTSA-208ENST00000485627 CRYBB3P26998 211 aa7.33□□□□□ -1.24
CTSA-208ENST00000485627 AKR1C3P42330 323 aa7.33□□□□□ -1.24
CTSA-208ENST00000485627 PNRC1Q12796 327 aaPredicted RBP7.33□□□□□ -1.24
CTSA-208ENST00000485627 PDE6HQ13956 83 aa7.33□□□□□ -1.24
CTSA-208ENST00000485627 TMEM241Q24JQ0 296 aa7.33□□□□□ -1.24
CTSA-208ENST00000485627 GPHB5Q86YW7 130 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms