RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SPANXN5Q5MJ07 72 aa13.62□□□□□ -0.23
COL27A1-205ENST00000485397 BPIFCQ8NFQ6 507 aa13.62□□□□□ -0.23
COL27A1-205ENST00000485397 OR1B1Q8NGR6 318 aa13.62□□□□□ -0.23
COL27A1-205ENST00000485397 TMEM208Q9BTX3 173 aa13.62□□□□□ -0.23
COL27A1-205ENST00000485397 PKD1P98161 4303 aa13.62□□□□□ -0.23
COL27A1-205ENST00000485397 TRAV8-2A0A0B4J237 113 aa13.61□□□□□ -0.23
COL27A1-205ENST00000485397 H3BP45 60 aa13.61□□□□□ -0.23
COL27A1-205ENST00000485397 NOL3O60936 208 aaKnown RBP13.61□□□□□ -0.23
COL27A1-205ENST00000485397 CNN1P51911 297 aaKnown RBP13.61□□□□□ -0.23
COL27A1-205ENST00000485397 AP3S2P59780 193 aa13.61□□□□□ -0.23
COL27A1-205ENST00000485397 AKR1C1Q04828 323 aa13.61□□□□□ -0.23
COL27A1-205ENST00000485397 OR11H7Q8NGC8 314 aa13.61□□□□□ -0.23
COL27A1-205ENST00000485397 OR4D5Q8NGN0 318 aa13.61□□□□□ -0.23
COL27A1-205ENST00000485397 TMEM147Q9BVK8 224 aa13.61□□□□□ -0.23
COL27A1-205ENST00000485397 ZNF705GA8MUZ8 300 aaPredicted RBP13.6□□□□□ -0.23
COL27A1-205ENST00000485397 M0R2Z0 102 aa13.6□□□□□ -0.23
COL27A1-205ENST00000485397 CRXO43186 299 aaPredicted RBP13.6□□□□□ -0.23
COL27A1-205ENST00000485397 SPINK13Q1W4C9 94 aa13.6□□□□□ -0.23
COL27A1-205ENST00000485397 RNF212Q495C1 297 aa13.6□□□□□ -0.23
COL27A1-205ENST00000485397 ACOT7LQ6ZUV0 252 aa13.6□□□□□ -0.23
COL27A1-205ENST00000485397 RNF182Q8N6D2 247 aa13.6□□□□□ -0.23
COL27A1-205ENST00000485397 SLC25A21Q9BQT8 299 aaPredicted RBP13.6□□□□□ -0.23
COL27A1-205ENST00000485397 V9GYH0 126 aa13.6□□□□□ -0.23
COL27A1-205ENST00000485397 FGL1Q08830 312 aa13.59□□□□□ -0.23
COL27A1-205ENST00000485397 GPR82Q96P67 336 aa13.59□□□□□ -0.23
COL27A1-205ENST00000485397 STRAPQ9Y3F4 350 aaKnown RBP13.59□□□□□ -0.23
COL27A1-205ENST00000485397 DUSP14O95147 198 aaKnown RBP13.58□□□□□ -0.24
COL27A1-205ENST00000485397 NACAE9PAV3 2078 aa13.57□□□□□ -0.24
COL27A1-205ENST00000485397 SMCO3A2RU48 225 aa13.57□□□□□ -0.24
COL27A1-205ENST00000485397 H3BRN7 92 aa13.57□□□□□ -0.24
COL27A1-205ENST00000485397 INSP01308 110 aa13.57□□□□□ -0.24
COL27A1-205ENST00000485397 POLR2GP62487 172 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL27A1-205ENST00000485397 CYP2G1PQ6ZSU1 146 aa13.57□□□□□ -0.24
COL27A1-205ENST00000485397 TMEM144Q7Z5S9 345 aa13.57□□□□□ -0.24
COL27A1-205ENST00000485397 BAP18Q8IXM2 172 aa13.57□□□□□ -0.24
COL27A1-205ENST00000485397 SLC25A39Q9BZJ4 359 aaPredicted RBP13.57□□□□□ -0.24
COL27A1-205ENST00000485397 TRAV12-2A0A075B6T6 113 aa13.56□□□□□ -0.24
COL27A1-205ENST00000485397 ADAP1O75689 374 aa13.56□□□□□ -0.24
COL27A1-205ENST00000485397 IL5P05113 134 aa13.56□□□□□ -0.24
COL27A1-205ENST00000485397 AZU1P20160 251 aa13.56□□□□□ -0.24
COL27A1-205ENST00000485397 S100A7P31151 101 aa13.56□□□□□ -0.24
COL27A1-205ENST00000485397 ID3Q02535 119 aa13.56□□□□□ -0.24
COL27A1-205ENST00000485397 ZNF738Q8NE65 137 aa13.56□□□□□ -0.24
COL27A1-205ENST00000485397 SHANK2-AS3Q9BTD1 123 aa13.56□□□□□ -0.24
COL27A1-205ENST00000485397 PMS2P5A8MQ11 134 aa13.55□□□□□ -0.24
COL27A1-205ENST00000485397 LYRM9A8MSI8 78 aa13.55□□□□□ -0.24
COL27A1-205ENST00000485397 DEFB130BP0DP73 79 aa13.55□□□□□ -0.24
COL27A1-205ENST00000485397 DEFB130AP0DP74 79 aa13.55□□□□□ -0.24
COL27A1-205ENST00000485397 PRB4P10163 310 aaPredicted RBP13.55□□□□□ -0.24
COL27A1-205ENST00000485397 RAP2BP61225 183 aa13.55□□□□□ -0.24
COL27A1-205ENST00000485397 FCN2Q15485 313 aa13.55□□□□□ -0.24
COL27A1-205ENST00000485397 SOHLH1Q5JUK2 328 aa13.55□□□□□ -0.24
COL27A1-205ENST00000485397 C1orf134Q5TEV5 83 aa13.55□□□□□ -0.24
COL27A1-205ENST00000485397 ZNF575Q86XF7 245 aa13.55□□□□□ -0.24
COL27A1-205ENST00000485397 PSENENQ9NZ42 101 aa13.55□□□□□ -0.24
COL27A1-205ENST00000485397 HIGD1AQ9Y241 93 aa13.55□□□□□ -0.24
COL27A1-205ENST00000485397 MUC4Q99102 2169 aa13.54□□□□□ -0.24
COL27A1-205ENST00000485397 PLAC8L1A1L4L8 177 aa13.54□□□□□ -0.24
COL27A1-205ENST00000485397 HYPMO75409 117 aa13.54□□□□□ -0.24
COL27A1-205ENST00000485397 CCNKO75909 580 aa13.54□□□□□ -0.24
COL27A1-205ENST00000485397 C15orf53Q8NAA6 179 aa13.54□□□□□ -0.24
COL27A1-205ENST00000485397 DEDD2Q8WXF8 326 aa13.54□□□□□ -0.24
COL27A1-205ENST00000485397 UHRF2Q96PU4 802 aa13.54□□□□□ -0.24
COL27A1-205ENST00000485397 RYR1P21817 5038 aa13.53□□□□□ -0.24
COL27A1-205ENST00000485397 C9orf170A2RU37 121 aa13.53□□□□□ -0.24
COL27A1-205ENST00000485397 BOLA2-SMG1P6H3BVE0 249 aa13.53□□□□□ -0.24
COL27A1-205ENST00000485397 OR5G3P0C626 314 aa13.53□□□□□ -0.24
COL27A1-205ENST00000485397 LINC00869P0C866 280 aa13.53□□□□□ -0.24
COL27A1-205ENST00000485397 RPL7P18124 248 aaKnown RBP13.53□□□□□ -0.24
COL27A1-205ENST00000485397 RRAS2P62070 204 aaPredicted RBP13.53□□□□□ -0.24
COL27A1-205ENST00000485397 HIST1H1AQ02539 215 aaPredicted RBP13.53□□□□□ -0.24
COL27A1-205ENST00000485397 CCDC190Q86UF4 302 aa13.53□□□□□ -0.24
COL27A1-205ENST00000485397 F5H768 121 aa13.52□□□□□ -0.25
COL27A1-205ENST00000485397 SSSCA1O60232 199 aa13.52□□□□□ -0.25
COL27A1-205ENST00000485397 CXCL3P19876 107 aa13.52□□□□□ -0.25
COL27A1-205ENST00000485397 TSPOP30536 169 aa13.52□□□□□ -0.25
COL27A1-205ENST00000485397 S100A5P33763 92 aa13.52□□□□□ -0.25
COL27A1-205ENST00000485397 PLP1P60201 277 aa13.52□□□□□ -0.25
COL27A1-205ENST00000485397 UBE2MP61081 183 aaKnown RBP13.52□□□□□ -0.25
COL27A1-205ENST00000485397 B2MP61769 119 aa13.52□□□□□ -0.25
COL27A1-205ENST00000485397 RHOBP62745 196 aa13.52□□□□□ -0.25
COL27A1-205ENST00000485397 OR8A1Q8NGG7 326 aa13.52□□□□□ -0.25
COL27A1-205ENST00000485397 LINC01587Q99440 93 aa13.52□□□□□ -0.25
COL27A1-205ENST00000485397 ATG101Q9BSB4 218 aa13.52□□□□□ -0.25
COL27A1-205ENST00000485397 FLVCR2Q9UPI3 526 aa13.52□□□□□ -0.25
COL27A1-205ENST00000485397 PSG3Q16557 428 aa13.51□□□□□ -0.25
COL27A1-205ENST00000485397 PATE2Q6UY27 113 aa13.51□□□□□ -0.25
COL27A1-205ENST00000485397 SMIM8Q96KF7 97 aa13.51□□□□□ -0.25
COL27A1-205ENST00000485397 A0A087X0K7 114 aa13.5□□□□□ -0.25
COL27A1-205ENST00000485397 NUDT3O95989 172 aa13.5□□□□□ -0.25
COL27A1-205ENST00000485397 METTL15P1P0C7V9 234 aa13.5□□□□□ -0.25
COL27A1-205ENST00000485397 HTN1P15515 57 aa13.5□□□□□ -0.25
COL27A1-205ENST00000485397 FAM3BP58499 235 aaPredicted RBP13.5□□□□□ -0.25
COL27A1-205ENST00000485397 SELENOTP62341 195 aa13.5□□□□□ -0.25
COL27A1-205ENST00000485397 DLK1P80370 383 aa13.5□□□□□ -0.25
COL27A1-205ENST00000485397 LRRC20Q8TCA0 184 aa13.5□□□□□ -0.25
COL27A1-205ENST00000485397 ARL6Q9H0F7 186 aa13.5□□□□□ -0.25
COL27A1-205ENST00000485397 PPP1R14DQ9NXH3 145 aa13.5□□□□□ -0.25
COL27A1-205ENST00000485397 CCDC160A6NGH7 325 aa13.49□□□□□ -0.25
COL27A1-205ENST00000485397 MRPS12O15235 138 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms