RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 SPINK6Q6UWN8 80 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 LINC00322Q6ZN03 302 aaPredicted RBP-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 GKN2Q86XP6 184 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 OR11H6Q8NGC7 330 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 TSKUQ8WUA8 353 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 NAT14Q8WUY8 206 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 ITFG2Q969R8 447 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 DPH3Q96FX2 82 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 PROK2Q9HC23 129 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 U3KQA8 63 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 ALKQ9UM73 1620 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 MED1Q15648 1581 aaPredicted RBP-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 CDC42BPGQ6DT37 1551 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 BICRAQ9NZM4 1560 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 SETBP1Q9Y6X0 1596 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 ZNF106Q9H2Y7 1883 aaKnown RBP-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 NKTRP30414 1462 aaKnown RBP-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 C1orf167Q5SNV9 1468 aa-0.29□□□□□ -2.46
CCDC66-219ENST00000484441 TJP1Q07157 1748 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 ROBO3Q96MS0 1386 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 LRP6O75581 1613 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 PTPN23Q9H3S7 1636 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 A0A087WSZ3 146 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 K7EP34 96 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 CXCR6O00574 342 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 SULT1B1O43704 296 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 LY6G6CO95867 125 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 IFNA14P01570 189 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 PRM1P04553 51 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 RAB5BP61020 215 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 DEFB113Q30KQ7 82 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 C12orf74Q32Q52 190 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 KHDC3LQ587J8 217 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 HAGHLQ6PII5 290 aaPredicted RBP-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 LRRN1Q6UXK5 716 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 DEFB123Q8N688 67 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 UCK1Q9HA47 277 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 SIP14410 1827 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 ZMYM4Q5VZL5 1548 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 GOLGA3Q08378 1498 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 BCL9LQ86UU0 1499 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 FAM135BQ49AJ0 1406 aa-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 YTHDC2Q9H6S0 1430 aaKnown RBP-0.3□□□□□ -2.46
CCDC66-219ENST00000484441 MGAMO43451 1857 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 PLXNA2O75051 1894 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 UBR3Q6ZT12 1888 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 CICQ96RK0 1608 aaPredicted RBP-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 PIK3R4Q99570 1358 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 MAP2P11137 1827 aaKnown RBP-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 KIAA0586Q9BVV6 1533 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 TULP4Q9NRJ4 1543 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 YPEL1O60688 119 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 RNASE4P34096 147 aaKnown RBP-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 HAMPP81172 84 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 ESRGQ1W209 222 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 DEFB112Q30KQ8 113 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 Q6Q795 121 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 PHF5AQ7RTV0 110 aaKnown RBP-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 SIGLECL1Q8N7X8 197 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 PIGXQ8TBF5 258 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 PLAC4Q8WY50 150 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 KLK6Q92876 244 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 IMP4Q96G21 291 aaKnown RBP-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 TRIM4Q9C037 500 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 LRTM1Q9HBL6 345 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 MRC2Q9UBG0 1479 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 TROQ12816 1431 aaPredicted RBP-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 C10orf71Q711Q0 1435 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 ZNF236Q9UL36 1845 aa-0.31□□□□□ -2.46
CCDC66-219ENST00000484441 RTL1A6NKG5 1358 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 ADGRB1O14514 1584 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 ADAMTS12P58397 1594 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 ARHGEF12Q9NZN5 1544 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 TANC1Q9C0D5 1861 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 CUL7Q14999 1698 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 CTTNBP2Q8WZ74 1663 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 ARHGAP35Q9NRY4 1499 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 FAM25EA8MYX2 175 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 M0R378 163 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 TGOLN2O43493 480 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 CD2P06729 351 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 COX5BP10606 129 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 MGST1P10620 155 aaKnown RBP-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 HBA1P69905 142 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 PMAIP1Q13794 54 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 INSL4Q14641 139 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 ALKAL1Q6UXT8 129 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 WFDC9Q8NEX5 89 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 LINC01600Q96MT4 127 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 YPEL2Q96QA6 119 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 AGPAT4-IT1Q9H0P7 198 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 DPH3P1Q9H4G8 78 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 OPTCQ9UBM4 332 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 LRP5O75197 1615 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 DOCK4Q8N1I0 1966 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 UBR2Q8IWV8 1755 aa-0.32□□□□□ -2.46
CCDC66-219ENST00000484441 KIDINS220Q9ULH0 1771 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms